RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 CLCN6P51797 869 aa14.95□□□□□ -0.02
PRKDC-205ENST00000535375 FAM212AQ96EL1 285 aa14.95□□□□□ -0.02
PRKDC-205ENST00000535375 DCAF8Q5TAQ9 597 aa14.93□□□□□ -0.02
PRKDC-205ENST00000535375 GSE1Q14687 1217 aa14.88□□□□□ -0.03
PRKDC-205ENST00000535375 CIZ1Q9ULV3 898 aaPredicted RBP14.88□□□□□ -0.03
PRKDC-205ENST00000535375 PHF12Q96QT6 1004 aa14.86□□□□□ -0.03
PRKDC-205ENST00000535375 CCDC61Q9Y6R9 512 aa14.78□□□□□ -0.04
PRKDC-205ENST00000535375 GALR2O43603 387 aaPredicted RBP14.75□□□□□ -0.05
PRKDC-205ENST00000535375 DCBLD2Q96PD2 775 aa14.74□□□□□ -0.05
PRKDC-205ENST00000535375 PYGBP11216 843 aa14.7□□□□□ -0.06
PRKDC-205ENST00000535375 TRIM41Q8WV44 630 aa14.7□□□□□ -0.06
PRKDC-205ENST00000535375 MS4A3Q96HJ5 214 aa14.67□□□□□ -0.06
PRKDC-205ENST00000535375 POTEIP0CG38 1075 aa14.66□□□□□ -0.06
PRKDC-205ENST00000535375 KIF12Q96FN5 646 aa14.66□□□□□ -0.06
PRKDC-205ENST00000535375 CHRM1P11229 460 aaPredicted RBP14.63□□□□□ -0.07
PRKDC-205ENST00000535375 MAP3K13O43283 966 aa14.62□□□□□ -0.07
PRKDC-205ENST00000535375 PCDHB13Q9Y5F0 798 aa14.62□□□□□ -0.07
PRKDC-205ENST00000535375 ECM2O94769 699 aaPredicted RBP14.61□□□□□ -0.07
PRKDC-205ENST00000535375 PKD2Q13563 968 aa14.6□□□□□ -0.07
PRKDC-205ENST00000535375 AMER1Q5JTC6 1135 aaPredicted RBP14.6□□□□□ -0.07
PRKDC-205ENST00000535375 SGIP1Q9BQI5 828 aa14.59□□□□□ -0.07
PRKDC-205ENST00000535375 ZNF467Q7Z7K2 595 aaPredicted RBP14.53□□□□□ -0.08
PRKDC-205ENST00000535375 IFNL1Q8IU54 200 aa14.5□□□□□ -0.09
PRKDC-205ENST00000535375 RTN4Q9NQC3 1192 aaKnown RBP14.49□□□□□ -0.09
PRKDC-205ENST00000535375 PCDHB8Q9UN66 801 aa14.49□□□□□ -0.09
PRKDC-205ENST00000535375 ASTLQ6HA08 431 aaPredicted RBP14.47□□□□□ -0.09
PRKDC-205ENST00000535375 ATMINO43313 823 aaPredicted RBP14.45□□□□□ -0.1
PRKDC-205ENST00000535375 RIOK3O14730 519 aaKnown RBP14.44□□□□□ -0.1
PRKDC-205ENST00000535375 TRPC6Q9Y210 931 aa14.44□□□□□ -0.1
PRKDC-205ENST00000535375 TAOK2Q9UL54 1235 aa14.43□□□□□ -0.1
PRKDC-205ENST00000535375 TIE1P35590 1138 aa14.42□□□□□ -0.1
PRKDC-205ENST00000535375 LHX8Q68G74 356 aa14.42□□□□□ -0.1
PRKDC-205ENST00000535375 BMP2KQ9NSY1 1161 aaPredicted RBP14.42□□□□□ -0.1
PRKDC-205ENST00000535375 RGL2O15211 777 aa14.41□□□□□ -0.1
PRKDC-205ENST00000535375 PELP1Q8IZL8 1130 aaKnown RBP14.41□□□□□ -0.1
PRKDC-205ENST00000535375 RNF25Q96BH1 459 aaPredicted RBP14.4□□□□□ -0.1
PRKDC-205ENST00000535375 ATN1P54259 1190 aaPredicted RBP14.39□□□□□ -0.11
PRKDC-205ENST00000535375 PDAP1Q13442 181 aaKnown RBP14.38□□□□□ -0.11
PRKDC-205ENST00000535375 VGFO15240 615 aaPredicted RBP14.36□□□□□ -0.11
PRKDC-205ENST00000535375 PSEN1P49768 467 aa14.36□□□□□ -0.11
PRKDC-205ENST00000535375 SLC39A7Q92504 469 aa14.36□□□□□ -0.11
PRKDC-205ENST00000535375 TMEM106CQ9BVX2 250 aa14.35□□□□□ -0.11
PRKDC-205ENST00000535375 TTLL13PA6NNM8 815 aa14.34□□□□□ -0.11
PRKDC-205ENST00000535375 DCAF8L2P0C7V8 631 aa14.34□□□□□ -0.11
PRKDC-205ENST00000535375 C7P10643 843 aa14.33□□□□□ -0.12
PRKDC-205ENST00000535375 METRNQ9UJH8 293 aa14.33□□□□□ -0.12
PRKDC-205ENST00000535375 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.27□□□□□ -0.13
PRKDC-205ENST00000535375 GOLGA2Q08379 1002 aa14.27□□□□□ -0.13
PRKDC-205ENST00000535375 ZFP91Q96JP5 570 aaPredicted RBP14.27□□□□□ -0.13
PRKDC-205ENST00000535375 TRIM35Q9UPQ4 493 aa14.26□□□□□ -0.13
PRKDC-205ENST00000535375 STK25O00506 426 aa14.23□□□□□ -0.13
PRKDC-205ENST00000535375 STK24Q9Y6E0 443 aa14.2□□□□□ -0.14
PRKDC-205ENST00000535375 CHGAP10645 457 aaKnown RBP14.19□□□□□ -0.14
PRKDC-205ENST00000535375 IER5LQ5T953 404 aa14.19□□□□□ -0.14
PRKDC-205ENST00000535375 BCL11BQ9C0K0 894 aaPredicted RBP14.19□□□□□ -0.14
PRKDC-205ENST00000535375 POTEB2H3BUK9 544 aa14.18□□□□□ -0.14
PRKDC-205ENST00000535375 SEC24BO95487 1268 aa14.18□□□□□ -0.14
PRKDC-205ENST00000535375 CABP2Q9NPB3 220 aa14.18□□□□□ -0.14
PRKDC-205ENST00000535375 MKRN3Q13064 507 aaKnown RBP14.17□□□□□ -0.14
PRKDC-205ENST00000535375 HS6ST3Q8IZP7 471 aa14.12□□□□□ -0.15
PRKDC-205ENST00000535375 POTEFA5A3E0 1075 aa14.11□□□□□ -0.15
PRKDC-205ENST00000535375 COLQQ9Y215 455 aaPredicted RBP14.1□□□□□ -0.15
PRKDC-205ENST00000535375 EFCAB3Q8N7B9 438 aa14.08□□□□□ -0.16
PRKDC-205ENST00000535375 PLCG2P16885 1265 aa14.07□□□□□ -0.16
PRKDC-205ENST00000535375 OTUD5Q96G74 571 aa14.07□□□□□ -0.16
PRKDC-205ENST00000535375 MAMSTRQ6ZN01 415 aa14.06□□□□□ -0.16
PRKDC-205ENST00000535375 POTEJP0CG39 1038 aa14.04□□□□□ -0.16
PRKDC-205ENST00000535375 SOX12O15370 315 aa14.03□□□□□ -0.16
PRKDC-205ENST00000535375 IRX5P78411 483 aaPredicted RBP14.03□□□□□ -0.16
PRKDC-205ENST00000535375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.03□□□□□ -0.164e-16■■■□□ 16.9
PRKDC-205ENST00000535375 SCUBE2Q9NQ36 999 aa14.02□□□□□ -0.17
PRKDC-205ENST00000535375 OCEL1Q9H607 264 aa14.01□□□□□ -0.17
PRKDC-205ENST00000535375 NLRP6P59044 892 aa13.96□□□□□ -0.17
PRKDC-205ENST00000535375 PHF8Q9UPP1 1060 aa13.94□□□□□ -0.18
PRKDC-205ENST00000535375 DNAJC5Q9H3Z4 198 aa13.93□□□□□ -0.18
PRKDC-205ENST00000535375 BBXQ8WY36 941 aaPredicted RBP13.92□□□□□ -0.18
PRKDC-205ENST00000535375 MFRPQ9BY79 579 aa13.91□□□□□ -0.18
PRKDC-205ENST00000535375 ILDR1Q86SU0 546 aaPredicted RBP13.89□□□□□ -0.19
PRKDC-205ENST00000535375 PDCD7Q8N8D1 485 aaKnown RBP13.89□□□□□ -0.19
PRKDC-205ENST00000535375 RYDENQ9NUL5 291 aaKnown RBP13.89□□□□□ -0.19
PRKDC-205ENST00000535375 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.89□□□□□ -0.19
PRKDC-205ENST00000535375 G3V3G9 751 aa13.87□□□□□ -0.19
PRKDC-205ENST00000535375 NKX1-1Q15270 411 aaPredicted RBP13.87□□□□□ -0.19
PRKDC-205ENST00000535375 L3MBTL3Q96JM7 780 aaPredicted RBP13.86□□□□□ -0.19
PRKDC-205ENST00000535375 FBXO22Q8NEZ5 403 aa13.85□□□□□ -0.19
PRKDC-205ENST00000535375 DPY19L2Q6NUT2 758 aa13.84□□□□□ -0.19
PRKDC-205ENST00000535375 MS4A4AQ96JQ5 239 aa13.82□□□□□ -0.2
PRKDC-205ENST00000535375 SLAIN1Q8ND83 568 aa13.78□□□□□ -0.2
PRKDC-205ENST00000535375 BOLA1Q9Y3E2 137 aa13.78□□□□□ -0.2
PRKDC-205ENST00000535375 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.77□□□□□ -0.21
PRKDC-205ENST00000535375 GTPBP6O43824 516 aaPredicted RBP13.76□□□□□ -0.21
PRKDC-205ENST00000535375 C3orf67Q6ZVT6 689 aa13.76□□□□□ -0.21
PRKDC-205ENST00000535375 SPRYD3Q8NCJ5 442 aa13.76□□□□□ -0.21
PRKDC-205ENST00000535375 CFAP44Q96MT7 982 aa13.73□□□□□ -0.21
PRKDC-205ENST00000535375 PAXIP1Q6ZW49 1069 aaPredicted RBP13.72□□□□□ -0.21
PRKDC-205ENST00000535375 PPP1R37O75864 691 aa13.71□□□□□ -0.21
PRKDC-205ENST00000535375 MICALL2Q8IY33 904 aa13.7□□□□□ -0.22
PRKDC-205ENST00000535375 FAM163AQ96GL9 167 aaPredicted RBP13.66□□□□□ -0.22
PRKDC-205ENST00000535375 TMEM121BQ9BXQ6 578 aaPredicted RBP13.66□□□□□ -0.22
PRKDC-205ENST00000535375 SNPHO15079 494 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms