RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 VSIG10Q8N0Z9 540 aa9.02□□□□□ -0.97
CYCSP28-201ENST00000534284 CREBZFQ9NS37 354 aa9.02□□□□□ -0.97
CYCSP28-201ENST00000534284 STAG3Q9UJ98 1225 aa9.02□□□□□ -0.97
CYCSP28-201ENST00000534284 ZNF579Q8NAF0 562 aaKnown RBP8.99□□□□□ -0.97
CYCSP28-201ENST00000534284 CLCN6P51797 869 aa8.98□□□□□ -0.97
CYCSP28-201ENST00000534284 BBXQ8WY36 941 aaPredicted RBP8.98□□□□□ -0.97
CYCSP28-201ENST00000534284 PAXIP1Q6ZW49 1069 aaPredicted RBP8.97□□□□□ -0.97
CYCSP28-201ENST00000534284 MIER1Q8N108 512 aa8.97□□□□□ -0.97
CYCSP28-201ENST00000534284 CFAP44Q96MT7 982 aa8.97□□□□□ -0.97
CYCSP28-201ENST00000534284 DCBLD2Q96PD2 775 aa8.97□□□□□ -0.97
CYCSP28-201ENST00000534284 ZRANB1Q9UGI0 708 aa8.97□□□□□ -0.97
CYCSP28-201ENST00000534284 GALR2O43603 387 aaPredicted RBP8.95□□□□□ -0.98
CYCSP28-201ENST00000534284 PLEKHG5O94827 1062 aa8.92□□□□□ -0.98
CYCSP28-201ENST00000534284 POTEB2H3BUK9 544 aa8.91□□□□□ -0.98
CYCSP28-201ENST00000534284 CIZ1Q9ULV3 898 aaPredicted RBP8.9□□□□□ -0.98
CYCSP28-201ENST00000534284 NPM1P06748 294 aaKnown RBP eCLIP8.89□□□□□ -0.99
CYCSP28-201ENST00000534284 PRKCSHP14314 528 aaPredicted RBP8.89□□□□□ -0.99
CYCSP28-201ENST00000534284 RGL2O15211 777 aa8.88□□□□□ -0.99
CYCSP28-201ENST00000534284 OTUD5Q96G74 571 aa8.88□□□□□ -0.99
CYCSP28-201ENST00000534284 TAOK2Q9UL54 1235 aa8.88□□□□□ -0.99
CYCSP28-201ENST00000534284 SPRYD3Q8NCJ5 442 aa8.87□□□□□ -0.99
CYCSP28-201ENST00000534284 PHF12Q96QT6 1004 aa8.87□□□□□ -0.99
CYCSP28-201ENST00000534284 ZBTB47Q9UFB7 747 aaPredicted RBP8.86□□□□□ -0.99
CYCSP28-201ENST00000534284 MNX1P50219 401 aaPredicted RBP8.85□□□□□ -0.99
CYCSP28-201ENST00000534284 CHGAP10645 457 aaKnown RBP8.84□□□□□ -0.99
CYCSP28-201ENST00000534284 PELP1Q8IZL8 1130 aaKnown RBP8.84□□□□□ -0.99
CYCSP28-201ENST00000534284 PLSCR2Q9NRY7 297 aa8.84□□□□□ -0.99
CYCSP28-201ENST00000534284 KDM2AQ9Y2K7 1162 aa8.84□□□□□ -0.99
CYCSP28-201ENST00000534284 TPRNQ4KMQ1 711 aa8.8□□□□□ -1
CYCSP28-201ENST00000534284 TSHZ2Q9NRE2 1034 aa8.77□□□□□ -1.01
CYCSP28-201ENST00000534284 PAK3O75914 559 aaPredicted RBP8.76□□□□□ -1.01
CYCSP28-201ENST00000534284 TRIM41Q8WV44 630 aa8.76□□□□□ -1.01
CYCSP28-201ENST00000534284 POTEJP0CG39 1038 aa8.75□□□□□ -1.01
CYCSP28-201ENST00000534284 MS4A3Q96HJ5 214 aa8.73□□□□□ -1.01
CYCSP28-201ENST00000534284 ASTLQ6HA08 431 aaPredicted RBP8.71□□□□□ -1.02
CYCSP28-201ENST00000534284 POTEMA6NI47 508 aa8.7□□□□□ -1.02
CYCSP28-201ENST00000534284 ATMINO43313 823 aaPredicted RBP8.7□□□□□ -1.02
CYCSP28-201ENST00000534284 GSE1Q14687 1217 aa8.7□□□□□ -1.02
CYCSP28-201ENST00000534284 NBR1Q14596 966 aa8.69□□□□□ -1.02
CYCSP28-201ENST00000534284 METRNQ9UJH8 293 aa8.68□□□□□ -1.02
CYCSP28-201ENST00000534284 POTEGQ6S5H5 508 aa8.67□□□□□ -1.02
CYCSP28-201ENST00000534284 HS6ST3Q8IZP7 471 aa8.67□□□□□ -1.02
CYCSP28-201ENST00000534284 DCAF8Q5TAQ9 597 aa8.66□□□□□ -1.02
CYCSP28-201ENST00000534284 TSPYL2Q9H2G4 693 aaPredicted RBP8.64□□□□□ -1.03
CYCSP28-201ENST00000534284 C7P10643 843 aa8.63□□□□□ -1.03
CYCSP28-201ENST00000534284 ATN1P54259 1190 aaPredicted RBP8.63□□□□□ -1.03
CYCSP28-201ENST00000534284 LCE2DQ5TA82 110 aaPredicted RBP8.63□□□□□ -1.03
CYCSP28-201ENST00000534284 SLC39A7Q92504 469 aa8.63□□□□□ -1.03
CYCSP28-201ENST00000534284 CCDC61Q9Y6R9 512 aa8.63□□□□□ -1.03
CYCSP28-201ENST00000534284 POTEFA5A3E0 1075 aa8.62□□□□□ -1.03
CYCSP28-201ENST00000534284 TRPC6Q9Y210 931 aa8.62□□□□□ -1.03
CYCSP28-201ENST00000534284 RIOK3O14730 519 aaKnown RBP8.6□□□□□ -1.03
CYCSP28-201ENST00000534284 RNF25Q96BH1 459 aaPredicted RBP8.6□□□□□ -1.03
CYCSP28-201ENST00000534284 KIF12Q96FN5 646 aa8.59□□□□□ -1.03
CYCSP28-201ENST00000534284 NUBP1P53384 320 aa8.58□□□□□ -1.04
CYCSP28-201ENST00000534284 FAM212AQ96EL1 285 aa8.58□□□□□ -1.04
CYCSP28-201ENST00000534284 STK25O00506 426 aa8.57□□□□□ -1.04
CYCSP28-201ENST00000534284 BMP2KQ9NSY1 1161 aaPredicted RBP8.56□□□□□ -1.04
CYCSP28-201ENST00000534284 VGFO15240 615 aaPredicted RBP8.54□□□□□ -1.04
CYCSP28-201ENST00000534284 MAP3K13O43283 966 aa8.54□□□□□ -1.04
CYCSP28-201ENST00000534284 DNAJC5Q9H3Z4 198 aa8.54□□□□□ -1.04
CYCSP28-201ENST00000534284 MAMSTRQ6ZN01 415 aa8.53□□□□□ -1.04
CYCSP28-201ENST00000534284 RASEFQ8IZ41 740 aa8.53□□□□□ -1.04
CYCSP28-201ENST00000534284 FAM163AQ96GL9 167 aaPredicted RBP8.53□□□□□ -1.04
CYCSP28-201ENST00000534284 NKX1-1Q15270 411 aaPredicted RBP8.52□□□□□ -1.05
CYCSP28-201ENST00000534284 GTPBP6O43824 516 aaPredicted RBP8.51□□□□□ -1.05
CYCSP28-201ENST00000534284 PCDH10Q9P2E7 1040 aa8.5□□□□□ -1.05
CYCSP28-201ENST00000534284 COLQQ9Y215 455 aaPredicted RBP8.5□□□□□ -1.05
CYCSP28-201ENST00000534284 STK24Q9Y6E0 443 aa8.5□□□□□ -1.05
CYCSP28-201ENST00000534284 SCUBE2Q9NQ36 999 aa8.49□□□□□ -1.05
CYCSP28-201ENST00000534284 TIE1P35590 1138 aa8.48□□□□□ -1.05
CYCSP28-201ENST00000534284 RYDENQ9NUL5 291 aaKnown RBP8.48□□□□□ -1.05
CYCSP28-201ENST00000534284 TTLL13PA6NNM8 815 aa8.46□□□□□ -1.06
CYCSP28-201ENST00000534284 BCL11BQ9C0K0 894 aaPredicted RBP8.46□□□□□ -1.06
CYCSP28-201ENST00000534284 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.45□□□□□ -1.06
CYCSP28-201ENST00000534284 ZFP91Q96JP5 570 aaPredicted RBP8.45□□□□□ -1.06
CYCSP28-201ENST00000534284 PYGBP11216 843 aa8.44□□□□□ -1.06
CYCSP28-201ENST00000534284 CHRM1P11229 460 aaPredicted RBP8.44□□□□□ -1.06
CYCSP28-201ENST00000534284 SGIP1Q9BQI5 828 aa8.41□□□□□ -1.06
CYCSP28-201ENST00000534284 SEC24BO95487 1268 aa8.39□□□□□ -1.07
CYCSP28-201ENST00000534284 TRIM35Q9UPQ4 493 aa8.39□□□□□ -1.07
CYCSP28-201ENST00000534284 P3H3Q8IVL6 736 aa8.38□□□□□ -1.07
CYCSP28-201ENST00000534284 WDR70Q9NW82 654 aa8.38□□□□□ -1.07
CYCSP28-201ENST00000534284 PCDHB13Q9Y5F0 798 aa8.38□□□□□ -1.07
CYCSP28-201ENST00000534284 IFNL1Q8IU54 200 aa8.36□□□□□ -1.07
CYCSP28-201ENST00000534284 IER5LQ5T953 404 aa8.34□□□□□ -1.07
CYCSP28-201ENST00000534284 CDAN1Q8IWY9 1227 aa8.34□□□□□ -1.07
CYCSP28-201ENST00000534284 ZNF467Q7Z7K2 595 aaPredicted RBP8.32□□□□□ -1.08
CYCSP28-201ENST00000534284 ST18O60284 1047 aa8.31□□□□□ -1.08
CYCSP28-201ENST00000534284 SLAIN1Q8ND83 568 aa8.3□□□□□ -1.08
CYCSP28-201ENST00000534284 GTF3C3Q9Y5Q9 886 aa8.3□□□□□ -1.08
CYCSP28-201ENST00000534284 TULP1O00294 542 aaPredicted RBP8.29□□□□□ -1.08
CYCSP28-201ENST00000534284 TMEM106CQ9BVX2 250 aa8.29□□□□□ -1.08
CYCSP28-201ENST00000534284 IRX5P78411 483 aaPredicted RBP8.28□□□□□ -1.08
CYCSP28-201ENST00000534284 PDAP1Q13442 181 aaKnown RBP8.28□□□□□ -1.08
CYCSP28-201ENST00000534284 KCNV2Q8TDN2 545 aa8.25□□□□□ -1.09
CYCSP28-201ENST00000534284 PLCG2P16885 1265 aa8.24□□□□□ -1.09
CYCSP28-201ENST00000534284 CADPS2Q86UW7 1296 aa8.24□□□□□ -1.09
CYCSP28-201ENST00000534284 PCDHB8Q9UN66 801 aa8.24□□□□□ -1.09
CYCSP28-201ENST00000534284 TIMELESSQ9UNS1 1208 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms