RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 VSIG10Q8N0Z9 540 aa9.02□□□□□ -0.97
CYCSP28-201ENST00000534284 CREBZFQ9NS37 354 aa9.02□□□□□ -0.97
CYCSP28-201ENST00000534284 STAG3Q9UJ98 1225 aa9.02□□□□□ -0.97
CYCSP28-201ENST00000534284 ZNF579Q8NAF0 562 aaKnown RBP8.99□□□□□ -0.97
CYCSP28-201ENST00000534284 CLCN6P51797 869 aa8.98□□□□□ -0.97
CYCSP28-201ENST00000534284 BBXQ8WY36 941 aaPredicted RBP8.98□□□□□ -0.97
CYCSP28-201ENST00000534284 PAXIP1Q6ZW49 1069 aaPredicted RBP8.97□□□□□ -0.97
CYCSP28-201ENST00000534284 MIER1Q8N108 512 aa8.97□□□□□ -0.97
CYCSP28-201ENST00000534284 CFAP44Q96MT7 982 aa8.97□□□□□ -0.97
CYCSP28-201ENST00000534284 DCBLD2Q96PD2 775 aa8.97□□□□□ -0.97
CYCSP28-201ENST00000534284 ZRANB1Q9UGI0 708 aa8.97□□□□□ -0.97
CYCSP28-201ENST00000534284 GALR2O43603 387 aaPredicted RBP8.95□□□□□ -0.98
CYCSP28-201ENST00000534284 PLEKHG5O94827 1062 aa8.92□□□□□ -0.98
CYCSP28-201ENST00000534284 POTEB2H3BUK9 544 aa8.91□□□□□ -0.98
CYCSP28-201ENST00000534284 CIZ1Q9ULV3 898 aaPredicted RBP8.9□□□□□ -0.98
CYCSP28-201ENST00000534284 NPM1P06748 294 aaKnown RBP eCLIP8.89□□□□□ -0.99
CYCSP28-201ENST00000534284 PRKCSHP14314 528 aaPredicted RBP8.89□□□□□ -0.99
CYCSP28-201ENST00000534284 RGL2O15211 777 aa8.88□□□□□ -0.99
CYCSP28-201ENST00000534284 OTUD5Q96G74 571 aa8.88□□□□□ -0.99
CYCSP28-201ENST00000534284 TAOK2Q9UL54 1235 aa8.88□□□□□ -0.99
CYCSP28-201ENST00000534284 SPRYD3Q8NCJ5 442 aa8.87□□□□□ -0.99
CYCSP28-201ENST00000534284 PHF12Q96QT6 1004 aa8.87□□□□□ -0.99
CYCSP28-201ENST00000534284 ZBTB47Q9UFB7 747 aaPredicted RBP8.86□□□□□ -0.99
CYCSP28-201ENST00000534284 MNX1P50219 401 aaPredicted RBP8.85□□□□□ -0.99
CYCSP28-201ENST00000534284 CHGAP10645 457 aaKnown RBP8.84□□□□□ -0.99
CYCSP28-201ENST00000534284 PELP1Q8IZL8 1130 aaKnown RBP8.84□□□□□ -0.99
CYCSP28-201ENST00000534284 PLSCR2Q9NRY7 297 aa8.84□□□□□ -0.99
CYCSP28-201ENST00000534284 KDM2AQ9Y2K7 1162 aa8.84□□□□□ -0.99
CYCSP28-201ENST00000534284 TPRNQ4KMQ1 711 aa8.8□□□□□ -1
CYCSP28-201ENST00000534284 TSHZ2Q9NRE2 1034 aa8.77□□□□□ -1.01
CYCSP28-201ENST00000534284 PAK3O75914 559 aaPredicted RBP8.76□□□□□ -1.01
CYCSP28-201ENST00000534284 TRIM41Q8WV44 630 aa8.76□□□□□ -1.01
CYCSP28-201ENST00000534284 POTEJP0CG39 1038 aa8.75□□□□□ -1.01
CYCSP28-201ENST00000534284 MS4A3Q96HJ5 214 aa8.73□□□□□ -1.01
CYCSP28-201ENST00000534284 ASTLQ6HA08 431 aaPredicted RBP8.71□□□□□ -1.02
CYCSP28-201ENST00000534284 POTEMA6NI47 508 aa8.7□□□□□ -1.02
CYCSP28-201ENST00000534284 ATMINO43313 823 aaPredicted RBP8.7□□□□□ -1.02
CYCSP28-201ENST00000534284 GSE1Q14687 1217 aa8.7□□□□□ -1.02
CYCSP28-201ENST00000534284 NBR1Q14596 966 aa8.69□□□□□ -1.02
CYCSP28-201ENST00000534284 METRNQ9UJH8 293 aa8.68□□□□□ -1.02
CYCSP28-201ENST00000534284 POTEGQ6S5H5 508 aa8.67□□□□□ -1.02
CYCSP28-201ENST00000534284 HS6ST3Q8IZP7 471 aa8.67□□□□□ -1.02
CYCSP28-201ENST00000534284 DCAF8Q5TAQ9 597 aa8.66□□□□□ -1.02
CYCSP28-201ENST00000534284 TSPYL2Q9H2G4 693 aaPredicted RBP8.64□□□□□ -1.03
CYCSP28-201ENST00000534284 C7P10643 843 aa8.63□□□□□ -1.03
CYCSP28-201ENST00000534284 ATN1P54259 1190 aaPredicted RBP8.63□□□□□ -1.03
CYCSP28-201ENST00000534284 LCE2DQ5TA82 110 aaPredicted RBP8.63□□□□□ -1.03
CYCSP28-201ENST00000534284 SLC39A7Q92504 469 aa8.63□□□□□ -1.03
CYCSP28-201ENST00000534284 CCDC61Q9Y6R9 512 aa8.63□□□□□ -1.03
CYCSP28-201ENST00000534284 POTEFA5A3E0 1075 aa8.62□□□□□ -1.03
CYCSP28-201ENST00000534284 TRPC6Q9Y210 931 aa8.62□□□□□ -1.03
CYCSP28-201ENST00000534284 RIOK3O14730 519 aaKnown RBP8.6□□□□□ -1.03
CYCSP28-201ENST00000534284 RNF25Q96BH1 459 aaPredicted RBP8.6□□□□□ -1.03
CYCSP28-201ENST00000534284 KIF12Q96FN5 646 aa8.59□□□□□ -1.03
CYCSP28-201ENST00000534284 NUBP1P53384 320 aa8.58□□□□□ -1.04
CYCSP28-201ENST00000534284 FAM212AQ96EL1 285 aa8.58□□□□□ -1.04
CYCSP28-201ENST00000534284 STK25O00506 426 aa8.57□□□□□ -1.04
CYCSP28-201ENST00000534284 BMP2KQ9NSY1 1161 aaPredicted RBP8.56□□□□□ -1.04
CYCSP28-201ENST00000534284 VGFO15240 615 aaPredicted RBP8.54□□□□□ -1.04
CYCSP28-201ENST00000534284 MAP3K13O43283 966 aa8.54□□□□□ -1.04
CYCSP28-201ENST00000534284 DNAJC5Q9H3Z4 198 aa8.54□□□□□ -1.04
CYCSP28-201ENST00000534284 MAMSTRQ6ZN01 415 aa8.53□□□□□ -1.04
CYCSP28-201ENST00000534284 RASEFQ8IZ41 740 aa8.53□□□□□ -1.04
CYCSP28-201ENST00000534284 FAM163AQ96GL9 167 aaPredicted RBP8.53□□□□□ -1.04
CYCSP28-201ENST00000534284 NKX1-1Q15270 411 aaPredicted RBP8.52□□□□□ -1.05
CYCSP28-201ENST00000534284 GTPBP6O43824 516 aaPredicted RBP8.51□□□□□ -1.05
CYCSP28-201ENST00000534284 PCDH10Q9P2E7 1040 aa8.5□□□□□ -1.05
CYCSP28-201ENST00000534284 COLQQ9Y215 455 aaPredicted RBP8.5□□□□□ -1.05
CYCSP28-201ENST00000534284 STK24Q9Y6E0 443 aa8.5□□□□□ -1.05
CYCSP28-201ENST00000534284 SCUBE2Q9NQ36 999 aa8.49□□□□□ -1.05
CYCSP28-201ENST00000534284 TIE1P35590 1138 aa8.48□□□□□ -1.05
CYCSP28-201ENST00000534284 RYDENQ9NUL5 291 aaKnown RBP8.48□□□□□ -1.05
CYCSP28-201ENST00000534284 TTLL13PA6NNM8 815 aa8.46□□□□□ -1.06
CYCSP28-201ENST00000534284 BCL11BQ9C0K0 894 aaPredicted RBP8.46□□□□□ -1.06
CYCSP28-201ENST00000534284 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.45□□□□□ -1.06
CYCSP28-201ENST00000534284 ZFP91Q96JP5 570 aaPredicted RBP8.45□□□□□ -1.06
CYCSP28-201ENST00000534284 PYGBP11216 843 aa8.44□□□□□ -1.06
CYCSP28-201ENST00000534284 CHRM1P11229 460 aaPredicted RBP8.44□□□□□ -1.06
CYCSP28-201ENST00000534284 SGIP1Q9BQI5 828 aa8.41□□□□□ -1.06
CYCSP28-201ENST00000534284 SEC24BO95487 1268 aa8.39□□□□□ -1.07
CYCSP28-201ENST00000534284 TRIM35Q9UPQ4 493 aa8.39□□□□□ -1.07
CYCSP28-201ENST00000534284 P3H3Q8IVL6 736 aa8.38□□□□□ -1.07
CYCSP28-201ENST00000534284 WDR70Q9NW82 654 aa8.38□□□□□ -1.07
CYCSP28-201ENST00000534284 PCDHB13Q9Y5F0 798 aa8.38□□□□□ -1.07
CYCSP28-201ENST00000534284 IFNL1Q8IU54 200 aa8.36□□□□□ -1.07
CYCSP28-201ENST00000534284 IER5LQ5T953 404 aa8.34□□□□□ -1.07
CYCSP28-201ENST00000534284 CDAN1Q8IWY9 1227 aa8.34□□□□□ -1.07
CYCSP28-201ENST00000534284 ZNF467Q7Z7K2 595 aaPredicted RBP8.32□□□□□ -1.08
CYCSP28-201ENST00000534284 ST18O60284 1047 aa8.31□□□□□ -1.08
CYCSP28-201ENST00000534284 SLAIN1Q8ND83 568 aa8.3□□□□□ -1.08
CYCSP28-201ENST00000534284 GTF3C3Q9Y5Q9 886 aa8.3□□□□□ -1.08
CYCSP28-201ENST00000534284 TULP1O00294 542 aaPredicted RBP8.29□□□□□ -1.08
CYCSP28-201ENST00000534284 TMEM106CQ9BVX2 250 aa8.29□□□□□ -1.08
CYCSP28-201ENST00000534284 IRX5P78411 483 aaPredicted RBP8.28□□□□□ -1.08
CYCSP28-201ENST00000534284 PDAP1Q13442 181 aaKnown RBP8.28□□□□□ -1.08
CYCSP28-201ENST00000534284 KCNV2Q8TDN2 545 aa8.25□□□□□ -1.09
CYCSP28-201ENST00000534284 PLCG2P16885 1265 aa8.24□□□□□ -1.09
CYCSP28-201ENST00000534284 CADPS2Q86UW7 1296 aa8.24□□□□□ -1.09
CYCSP28-201ENST00000534284 PCDHB8Q9UN66 801 aa8.24□□□□□ -1.09
CYCSP28-201ENST00000534284 TIMELESSQ9UNS1 1208 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms