RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 SPOCK2Q92563 424 aa13.32□□□□□ -0.28
ATM-223ENST00000533979 CCDC61Q9Y6R9 512 aa13.32□□□□□ -0.28
ATM-223ENST00000533979 DCAF8Q5TAQ9 597 aa13.3□□□□□ -0.28
ATM-223ENST00000533979 FAM212AQ96EL1 285 aa13.3□□□□□ -0.28
ATM-223ENST00000533979 PHF12Q96QT6 1004 aa13.26□□□□□ -0.29
ATM-223ENST00000533979 GSE1Q14687 1217 aa13.25□□□□□ -0.29
ATM-223ENST00000533979 KIF12Q96FN5 646 aa13.23□□□□□ -0.29
ATM-223ENST00000533979 SGIP1Q9BQI5 828 aa13.18□□□□□ -0.3
ATM-223ENST00000533979 GALR2O43603 387 aaPredicted RBP13.16□□□□□ -0.3
ATM-223ENST00000533979 MAP3K13O43283 966 aa13.15□□□□□ -0.3
ATM-223ENST00000533979 CHRM1P11229 460 aaPredicted RBP13.14□□□□□ -0.31
ATM-223ENST00000533979 CIZ1Q9ULV3 898 aaPredicted RBP13.13□□□□□ -0.31
ATM-223ENST00000533979 MS4A3Q96HJ5 214 aa13.11□□□□□ -0.31
ATM-223ENST00000533979 DCBLD2Q96PD2 775 aa13.11□□□□□ -0.31
ATM-223ENST00000533979 PYGBP11216 843 aa13.1□□□□□ -0.31
ATM-223ENST00000533979 PCDHB13Q9Y5F0 798 aa13.08□□□□□ -0.32
ATM-223ENST00000533979 POTEIP0CG38 1075 aa13.06□□□□□ -0.32
ATM-223ENST00000533979 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
ATM-223ENST00000533979 IFNL1Q8IU54 200 aa13.02□□□□□ -0.33
ATM-223ENST00000533979 TIE1P35590 1138 aa12.98□□□□□ -0.33
ATM-223ENST00000533979 ASTLQ6HA08 431 aaPredicted RBP12.98□□□□□ -0.33
ATM-223ENST00000533979 ATMINO43313 823 aaPredicted RBP12.96□□□□□ -0.33
ATM-223ENST00000533979 ZNF467Q7Z7K2 595 aaPredicted RBP12.96□□□□□ -0.33
ATM-223ENST00000533979 PCDHB8Q9UN66 801 aa12.95□□□□□ -0.34
ATM-223ENST00000533979 TRPC6Q9Y210 931 aa12.95□□□□□ -0.34
ATM-223ENST00000533979 BMP2KQ9NSY1 1161 aaPredicted RBP12.92□□□□□ -0.34
ATM-223ENST00000533979 TTLL13PA6NNM8 815 aa12.89□□□□□ -0.35
ATM-223ENST00000533979 ATN1P54259 1190 aaPredicted RBP12.89□□□□□ -0.35
ATM-223ENST00000533979 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
ATM-223ENST00000533979 PKD2Q13563 968 aa12.88□□□□□ -0.35
ATM-223ENST00000533979 TMEM106CQ9BVX2 250 aa12.86□□□□□ -0.35
ATM-223ENST00000533979 C7P10643 843 aa12.84□□□□□ -0.35
ATM-223ENST00000533979 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
ATM-223ENST00000533979 SLC39A7Q92504 469 aa12.83□□□□□ -0.36
ATM-223ENST00000533979 PSEN1P49768 467 aa12.82□□□□□ -0.36
ATM-223ENST00000533979 PDAP1Q13442 181 aaKnown RBP12.82□□□□□ -0.36
ATM-223ENST00000533979 RIOK3O14730 519 aaKnown RBP12.79□□□□□ -0.36
ATM-223ENST00000533979 TRIM35Q9UPQ4 493 aa12.79□□□□□ -0.36
ATM-223ENST00000533979 RNF25Q96BH1 459 aaPredicted RBP12.77□□□□□ -0.37
ATM-223ENST00000533979 IER5LQ5T953 404 aa12.76□□□□□ -0.37
ATM-223ENST00000533979 TAOK2Q9UL54 1235 aa12.76□□□□□ -0.37
ATM-223ENST00000533979 METRNQ9UJH8 293 aa12.74□□□□□ -0.37
ATM-223ENST00000533979 VGFO15240 615 aaPredicted RBP12.73□□□□□ -0.37
ATM-223ENST00000533979 LHX8Q68G74 356 aa12.73□□□□□ -0.37
ATM-223ENST00000533979 RGL2O15211 777 aa12.69□□□□□ -0.38
ATM-223ENST00000533979 GOLGA2Q08379 1002 aa12.68□□□□□ -0.38
ATM-223ENST00000533979 SEC24BO95487 1268 aa12.67□□□□□ -0.38
ATM-223ENST00000533979 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.66□□□□□ -0.38
ATM-223ENST00000533979 POTEFA5A3E0 1075 aa12.66□□□□□ -0.38
ATM-223ENST00000533979 MKRN3Q13064 507 aaKnown RBP12.66□□□□□ -0.38
ATM-223ENST00000533979 ZFP91Q96JP5 570 aaPredicted RBP12.66□□□□□ -0.38
ATM-223ENST00000533979 POTEB2H3BUK9 544 aa12.64□□□□□ -0.39
ATM-223ENST00000533979 IRX5P78411 483 aaPredicted RBP12.64□□□□□ -0.39
ATM-223ENST00000533979 OCEL1Q9H607 264 aa12.64□□□□□ -0.39
ATM-223ENST00000533979 COLQQ9Y215 455 aaPredicted RBP12.64□□□□□ -0.39
ATM-223ENST00000533979 CABP2Q9NPB3 220 aa12.63□□□□□ -0.39
ATM-223ENST00000533979 PLCG2P16885 1265 aa12.59□□□□□ -0.39
ATM-223ENST00000533979 ILDR1Q86SU0 546 aaPredicted RBP12.57□□□□□ -0.4
ATM-223ENST00000533979 SOX12O15370 315 aa12.56□□□□□ -0.4
ATM-223ENST00000533979 AMER1Q5JTC6 1135 aaPredicted RBP12.56□□□□□ -0.4
ATM-223ENST00000533979 EFCAB3Q8N7B9 438 aa12.56□□□□□ -0.4
ATM-223ENST00000533979 BCL11BQ9C0K0 894 aaPredicted RBP12.56□□□□□ -0.4
ATM-223ENST00000533979 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.56□□□□□ -0.42e-8■■■■■ 28
ATM-223ENST00000533979 STK25O00506 426 aa12.54□□□□□ -0.4
ATM-223ENST00000533979 POTEJP0CG39 1038 aa12.54□□□□□ -0.4
ATM-223ENST00000533979 MAMSTRQ6ZN01 415 aa12.54□□□□□ -0.4
ATM-223ENST00000533979 STK24Q9Y6E0 443 aa12.54□□□□□ -0.4
ATM-223ENST00000533979 PDCD7Q8N8D1 485 aaKnown RBP12.5□□□□□ -0.41
ATM-223ENST00000533979 OTUD5Q96G74 571 aa12.5□□□□□ -0.41
ATM-223ENST00000533979 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
ATM-223ENST00000533979 HS6ST3Q8IZP7 471 aa12.45□□□□□ -0.42
ATM-223ENST00000533979 RTN4Q9NQC3 1192 aaKnown RBP12.45□□□□□ -0.42
ATM-223ENST00000533979 SCUBE2Q9NQ36 999 aa12.44□□□□□ -0.42
ATM-223ENST00000533979 CHGAP10645 457 aaKnown RBP12.43□□□□□ -0.42
ATM-223ENST00000533979 DPY19L2Q6NUT2 758 aa12.43□□□□□ -0.42
ATM-223ENST00000533979 NLRP6P59044 892 aa12.42□□□□□ -0.42
ATM-223ENST00000533979 DNAJC5Q9H3Z4 198 aa12.41□□□□□ -0.42
ATM-223ENST00000533979 PHF8Q9UPP1 1060 aa12.41□□□□□ -0.42
ATM-223ENST00000533979 MFRPQ9BY79 579 aa12.38□□□□□ -0.43
ATM-223ENST00000533979 FBXO22Q8NEZ5 403 aa12.37□□□□□ -0.43
ATM-223ENST00000533979 MS4A4AQ96JQ5 239 aa12.36□□□□□ -0.43
ATM-223ENST00000533979 DCAF8L2P0C7V8 631 aa12.35□□□□□ -0.43
ATM-223ENST00000533979 BOLA1Q9Y3E2 137 aa12.35□□□□□ -0.43
ATM-223ENST00000533979 G3V3G9 751 aa12.34□□□□□ -0.43
ATM-223ENST00000533979 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.34□□□□□ -0.43
ATM-223ENST00000533979 TMEM121BQ9BXQ6 578 aaPredicted RBP12.33□□□□□ -0.44
ATM-223ENST00000533979 C3orf67Q6ZVT6 689 aa12.28□□□□□ -0.44
ATM-223ENST00000533979 SLAIN1Q8ND83 568 aa12.28□□□□□ -0.44
ATM-223ENST00000533979 NKX1-1Q15270 411 aaPredicted RBP12.26□□□□□ -0.45
ATM-223ENST00000533979 RYDENQ9NUL5 291 aaKnown RBP12.26□□□□□ -0.45
ATM-223ENST00000533979 MICALL2Q8IY33 904 aa12.24□□□□□ -0.45
ATM-223ENST00000533979 PPP1R37O75864 691 aa12.19□□□□□ -0.46
ATM-223ENST00000533979 BBXQ8WY36 941 aaPredicted RBP12.19□□□□□ -0.46
ATM-223ENST00000533979 GTPBP6O43824 516 aaPredicted RBP12.17□□□□□ -0.46
ATM-223ENST00000533979 SNPHO15079 494 aa12.16□□□□□ -0.46
ATM-223ENST00000533979 FAM163AQ96GL9 167 aaPredicted RBP12.12□□□□□ -0.47
ATM-223ENST00000533979 TMEM92Q6UXU6 159 aa12.11□□□□□ -0.47
ATM-223ENST00000533979 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
ATM-223ENST00000533979 KIF3CO14782 793 aa12.04□□□□□ -0.48
ATM-223ENST00000533979 SPRYD3Q8NCJ5 442 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms