RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 ABCC9O60706 1549 aa10.61□□□□□ -0.71
CHKA-208ENST00000533910 ZNF579Q8NAF0 562 aaKnown RBP10.59□□□□□ -0.71
CHKA-208ENST00000533910 KLHL34Q8N239 644 aa10.57□□□□□ -0.72
CHKA-208ENST00000533910 PLEKHG5O94827 1062 aa10.56□□□□□ -0.72
CHKA-208ENST00000533910 NACADO15069 1562 aa10.56□□□□□ -0.72
CHKA-208ENST00000533910 MNX1P50219 401 aaPredicted RBP10.55□□□□□ -0.72
CHKA-208ENST00000533910 PLCB2Q00722 1185 aa10.52□□□□□ -0.73
CHKA-208ENST00000533910 DCBLD2Q96PD2 775 aa10.52□□□□□ -0.73
CHKA-208ENST00000533910 SPOCK2Q92563 424 aa10.49□□□□□ -0.73
CHKA-208ENST00000533910 MIER1Q8N108 512 aa10.48□□□□□ -0.73
CHKA-208ENST00000533910 PLCD3Q8N3E9 789 aa10.48□□□□□ -0.73
CHKA-208ENST00000533910 RB1CC1Q8TDY2 1594 aa10.45□□□□□ -0.74
CHKA-208ENST00000533910 POTEIP0CG38 1075 aa10.45□□□□□ -0.74
CHKA-208ENST00000533910 HAP1P54257 671 aaPredicted RBP10.44□□□□□ -0.74
CHKA-208ENST00000533910 LHX8Q68G74 356 aa10.44□□□□□ -0.74
CHKA-208ENST00000533910 GALR2O43603 387 aaPredicted RBP10.43□□□□□ -0.74
CHKA-208ENST00000533910 ECM2O94769 699 aaPredicted RBP10.43□□□□□ -0.74
CHKA-208ENST00000533910 PHF12Q96QT6 1004 aa10.43□□□□□ -0.74
CHKA-208ENST00000533910 SHROOM4Q9ULL8 1493 aa10.42□□□□□ -0.74
CHKA-208ENST00000533910 TSPYL2Q9H2G4 693 aaPredicted RBP10.4□□□□□ -0.74
CHKA-208ENST00000533910 ZBTB47Q9UFB7 747 aaPredicted RBP10.39□□□□□ -0.75
CHKA-208ENST00000533910 SCRIBQ14160 1630 aa10.38□□□□□ -0.75
CHKA-208ENST00000533910 RGL2O15211 777 aa10.37□□□□□ -0.75
CHKA-208ENST00000533910 CCDC61Q9Y6R9 512 aa10.33□□□□□ -0.76
CHKA-208ENST00000533910 CIZ1Q9ULV3 898 aaPredicted RBP10.32□□□□□ -0.76
CHKA-208ENST00000533910 MS4A3Q96HJ5 214 aa10.31□□□□□ -0.76
CHKA-208ENST00000533910 UNC13AQ9UPW8 1703 aa10.3□□□□□ -0.76
CHKA-208ENST00000533910 RASEFQ8IZ41 740 aa10.28□□□□□ -0.76
CHKA-208ENST00000533910 PAXIP1Q6ZW49 1069 aaPredicted RBP10.27□□□□□ -0.77
CHKA-208ENST00000533910 KIF12Q96FN5 646 aa10.27□□□□□ -0.77
CHKA-208ENST00000533910 CFAP44Q96MT7 982 aa10.27□□□□□ -0.77
CHKA-208ENST00000533910 BBXQ8WY36 941 aaPredicted RBP10.26□□□□□ -0.77
CHKA-208ENST00000533910 ASTLQ6HA08 431 aaPredicted RBP10.25□□□□□ -0.77
CHKA-208ENST00000533910 ATMINO43313 823 aaPredicted RBP10.22□□□□□ -0.77
CHKA-208ENST00000533910 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.22□□□□□ -0.77
CHKA-208ENST00000533910 NUBP1P53384 320 aa10.21□□□□□ -0.77
CHKA-208ENST00000533910 SLC39A7Q92504 469 aa10.21□□□□□ -0.77
CHKA-208ENST00000533910 FAM212AQ96EL1 285 aa10.21□□□□□ -0.77
CHKA-208ENST00000533910 KDM2AQ9Y2K7 1162 aa10.21□□□□□ -0.77
CHKA-208ENST00000533910 MAP3K13O43283 966 aa10.2□□□□□ -0.78
CHKA-208ENST00000533910 CHGAP10645 457 aaKnown RBP10.2□□□□□ -0.78
CHKA-208ENST00000533910 C7P10643 843 aa10.19□□□□□ -0.78
CHKA-208ENST00000533910 PELP1Q8IZL8 1130 aaKnown RBP10.19□□□□□ -0.78
CHKA-208ENST00000533910 SGIP1Q9BQI5 828 aa10.18□□□□□ -0.78
CHKA-208ENST00000533910 VSIG10Q8N0Z9 540 aa10.17□□□□□ -0.78
CHKA-208ENST00000533910 METRNQ9UJH8 293 aa10.17□□□□□ -0.78
CHKA-208ENST00000533910 BICRAQ9NZM4 1560 aa10.15□□□□□ -0.78
CHKA-208ENST00000533910 TIE1P35590 1138 aa10.15□□□□□ -0.78
CHKA-208ENST00000533910 ATN1P54259 1190 aaPredicted RBP10.14□□□□□ -0.79
CHKA-208ENST00000533910 TSHZ2Q9NRE2 1034 aa10.14□□□□□ -0.79
CHKA-208ENST00000533910 PCDHB13Q9Y5F0 798 aa10.14□□□□□ -0.79
CHKA-208ENST00000533910 RNF25Q96BH1 459 aaPredicted RBP10.13□□□□□ -0.79
CHKA-208ENST00000533910 BMP2KQ9NSY1 1161 aaPredicted RBP10.13□□□□□ -0.79
CHKA-208ENST00000533910 PRKCSHP14314 528 aaPredicted RBP10.12□□□□□ -0.79
CHKA-208ENST00000533910 POTEB2H3BUK9 544 aa10.11□□□□□ -0.79
CHKA-208ENST00000533910 DCAF8Q5TAQ9 597 aa10.11□□□□□ -0.79
CHKA-208ENST00000533910 SPRYD3Q8NCJ5 442 aa10.11□□□□□ -0.79
CHKA-208ENST00000533910 OTUD5Q96G74 571 aa10.09□□□□□ -0.79
CHKA-208ENST00000533910 TRPC6Q9Y210 931 aa10.09□□□□□ -0.79
CHKA-208ENST00000533910 TTLL13PA6NNM8 815 aa10.07□□□□□ -0.8
CHKA-208ENST00000533910 MAMSTRQ6ZN01 415 aa10.07□□□□□ -0.8
CHKA-208ENST00000533910 BCANQ96GW7 911 aa10.07□□□□□ -0.8
CHKA-208ENST00000533910 GSE1Q14687 1217 aa10.05□□□□□ -0.8
CHKA-208ENST00000533910 IFNL1Q8IU54 200 aa10.05□□□□□ -0.8
CHKA-208ENST00000533910 SEC24BO95487 1268 aa10.03□□□□□ -0.8
CHKA-208ENST00000533910 CECR2Q9BXF3 1484 aa10.03□□□□□ -0.8
CHKA-208ENST00000533910 BAZ1AQ9NRL2 1556 aaPredicted RBP10.02□□□□□ -0.81
CHKA-208ENST00000533910 RSF1Q96T23 1441 aaPredicted RBP10.02□□□□□ -0.81
CHKA-208ENST00000533910 PYGBP11216 843 aa10.02□□□□□ -0.81
CHKA-208ENST00000533910 HS6ST3Q8IZP7 471 aa10.02□□□□□ -0.81
CHKA-208ENST00000533910 TRIM41Q8WV44 630 aa10.02□□□□□ -0.81
CHKA-208ENST00000533910 TRIM35Q9UPQ4 493 aa10.02□□□□□ -0.81
CHKA-208ENST00000533910 IER5LQ5T953 404 aa10.01□□□□□ -0.81
CHKA-208ENST00000533910 NKX1-1Q15270 411 aaPredicted RBP10□□□□□ -0.81
CHKA-208ENST00000533910 TMEM106CQ9BVX2 250 aa10□□□□□ -0.81
CHKA-208ENST00000533910 SCUBE2Q9NQ36 999 aa10□□□□□ -0.81
CHKA-208ENST00000533910 MROH2BQ7Z745 1585 aa10□□□□□ -0.81
CHKA-208ENST00000533910 SMARCA4P51532 1647 aa10□□□□□ -0.81
CHKA-208ENST00000533910 SUPT5HO00267 1087 aaKnown RBP9.99□□□□□ -0.81
CHKA-208ENST00000533910 RIOK3O14730 519 aaKnown RBP9.98□□□□□ -0.81
CHKA-208ENST00000533910 TAOK2Q9UL54 1235 aa9.98□□□□□ -0.81
CHKA-208ENST00000533910 POTEJP0CG39 1038 aa9.96□□□□□ -0.82
CHKA-208ENST00000533910 POTEFA5A3E0 1075 aa9.95□□□□□ -0.82
CHKA-208ENST00000533910 STK25O00506 426 aa9.93□□□□□ -0.82
CHKA-208ENST00000533910 ZNF467Q7Z7K2 595 aaPredicted RBP9.93□□□□□ -0.82
CHKA-208ENST00000533910 COLQQ9Y215 455 aaPredicted RBP9.93□□□□□ -0.82
CHKA-208ENST00000533910 WIZO95785 1651 aa9.93□□□□□ -0.82
CHKA-208ENST00000533910 PCDHB8Q9UN66 801 aa9.92□□□□□ -0.82
CHKA-208ENST00000533910 GTPBP6O43824 516 aaPredicted RBP9.91□□□□□ -0.82
CHKA-208ENST00000533910 CHRM1P11229 460 aaPredicted RBP9.91□□□□□ -0.82
CHKA-208ENST00000533910 PEG3Q9GZU2 1588 aa9.91□□□□□ -0.82
CHKA-208ENST00000533910 PLCG2P16885 1265 aa9.9□□□□□ -0.82
CHKA-208ENST00000533910 TPRNQ4KMQ1 711 aa9.9□□□□□ -0.82
CHKA-208ENST00000533910 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.89□□□□□ -0.83
CHKA-208ENST00000533910 ZFP91Q96JP5 570 aaPredicted RBP9.89□□□□□ -0.83
CHKA-208ENST00000533910 VGFO15240 615 aaPredicted RBP9.88□□□□□ -0.83
CHKA-208ENST00000533910 DNAJC5Q9H3Z4 198 aa9.88□□□□□ -0.83
CHKA-208ENST00000533910 BCL11BQ9C0K0 894 aaPredicted RBP9.87□□□□□ -0.83
CHKA-208ENST00000533910 STK24Q9Y6E0 443 aa9.87□□□□□ -0.83
CHKA-208ENST00000533910 TOP2AP11388 1531 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms