RNA–Protein interactions for RNA: ENST00000532117.1

RNPC3-207, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 3

Gene RNPC3, Length 237 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-207ENST00000532117 PHF12Q96QT6 1004 aa14.05□□□□□ -0.16
RNPC3-207ENST00000532117 CCDC61Q9Y6R9 512 aa14.02□□□□□ -0.17
RNPC3-207ENST00000532117 FAM212AQ96EL1 285 aa14□□□□□ -0.17
RNPC3-207ENST00000532117 DCAF8Q5TAQ9 597 aa13.96□□□□□ -0.17
RNPC3-207ENST00000532117 SPOCK2Q92563 424 aa13.96□□□□□ -0.17
RNPC3-207ENST00000532117 GALR2O43603 387 aaPredicted RBP13.92□□□□□ -0.18
RNPC3-207ENST00000532117 KIF12Q96FN5 646 aa13.92□□□□□ -0.18
RNPC3-207ENST00000532117 GSE1Q14687 1217 aa13.88□□□□□ -0.19
RNPC3-207ENST00000532117 MS4A3Q96HJ5 214 aa13.87□□□□□ -0.19
RNPC3-207ENST00000532117 MAP3K13O43283 966 aa13.85□□□□□ -0.19
RNPC3-207ENST00000532117 DCBLD2Q96PD2 775 aa13.85□□□□□ -0.19
RNPC3-207ENST00000532117 POTEIP0CG38 1075 aa13.8□□□□□ -0.2
RNPC3-207ENST00000532117 PYGBP11216 843 aa13.8□□□□□ -0.2
RNPC3-207ENST00000532117 CIZ1Q9ULV3 898 aaPredicted RBP13.8□□□□□ -0.2
RNPC3-207ENST00000532117 SGIP1Q9BQI5 828 aa13.79□□□□□ -0.2
RNPC3-207ENST00000532117 PCDHB13Q9Y5F0 798 aa13.78□□□□□ -0.2
RNPC3-207ENST00000532117 CHRM1P11229 460 aaPredicted RBP13.71□□□□□ -0.21
RNPC3-207ENST00000532117 IFNL1Q8IU54 200 aa13.71□□□□□ -0.21
RNPC3-207ENST00000532117 TRPC6Q9Y210 931 aa13.69□□□□□ -0.22
RNPC3-207ENST00000532117 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
RNPC3-207ENST00000532117 ATMINO43313 823 aaPredicted RBP13.66□□□□□ -0.22
RNPC3-207ENST00000532117 TIE1P35590 1138 aa13.66□□□□□ -0.22
RNPC3-207ENST00000532117 BMP2KQ9NSY1 1161 aaPredicted RBP13.65□□□□□ -0.22
RNPC3-207ENST00000532117 TRIM41Q8WV44 630 aa13.64□□□□□ -0.23
RNPC3-207ENST00000532117 PCDHB8Q9UN66 801 aa13.64□□□□□ -0.23
RNPC3-207ENST00000532117 ZNF467Q7Z7K2 595 aaPredicted RBP13.62□□□□□ -0.23
RNPC3-207ENST00000532117 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
RNPC3-207ENST00000532117 TTLL13PA6NNM8 815 aa13.6□□□□□ -0.23
RNPC3-207ENST00000532117 ATN1P54259 1190 aaPredicted RBP13.6□□□□□ -0.23
RNPC3-207ENST00000532117 TMEM106CQ9BVX2 250 aa13.57□□□□□ -0.24
RNPC3-207ENST00000532117 SLC39A7Q92504 469 aa13.54□□□□□ -0.24
RNPC3-207ENST00000532117 C7P10643 843 aa13.52□□□□□ -0.25
RNPC3-207ENST00000532117 TRIM35Q9UPQ4 493 aa13.51□□□□□ -0.25
RNPC3-207ENST00000532117 METRNQ9UJH8 293 aa13.5□□□□□ -0.25
RNPC3-207ENST00000532117 LHX8Q68G74 356 aa13.49□□□□□ -0.25
RNPC3-207ENST00000532117 PSEN1P49768 467 aa13.48□□□□□ -0.25
RNPC3-207ENST00000532117 PDAP1Q13442 181 aaKnown RBP13.48□□□□□ -0.25
RNPC3-207ENST00000532117 ECM2O94769 699 aaPredicted RBP13.46□□□□□ -0.25
RNPC3-207ENST00000532117 PKD2Q13563 968 aa13.46□□□□□ -0.25
RNPC3-207ENST00000532117 RIOK3O14730 519 aaKnown RBP13.43□□□□□ -0.26
RNPC3-207ENST00000532117 IER5LQ5T953 404 aa13.42□□□□□ -0.26
RNPC3-207ENST00000532117 RNF25Q96BH1 459 aaPredicted RBP13.42□□□□□ -0.26
RNPC3-207ENST00000532117 SEC24BO95487 1268 aa13.38□□□□□ -0.27
RNPC3-207ENST00000532117 GOLGA2Q08379 1002 aa13.37□□□□□ -0.27
RNPC3-207ENST00000532117 POTEB2H3BUK9 544 aa13.36□□□□□ -0.27
RNPC3-207ENST00000532117 POTEFA5A3E0 1075 aa13.35□□□□□ -0.27
RNPC3-207ENST00000532117 VGFO15240 615 aaPredicted RBP13.35□□□□□ -0.27
RNPC3-207ENST00000532117 COLQQ9Y215 455 aaPredicted RBP13.35□□□□□ -0.27
RNPC3-207ENST00000532117 MKRN3Q13064 507 aaKnown RBP13.33□□□□□ -0.28
RNPC3-207ENST00000532117 TAOK2Q9UL54 1235 aa13.33□□□□□ -0.28
RNPC3-207ENST00000532117 CABP2Q9NPB3 220 aa13.32□□□□□ -0.28
RNPC3-207ENST00000532117 RGL2O15211 777 aa13.31□□□□□ -0.28
RNPC3-207ENST00000532117 PLCG2P16885 1265 aa13.31□□□□□ -0.28
RNPC3-207ENST00000532117 IRX5P78411 483 aaPredicted RBP13.31□□□□□ -0.28
RNPC3-207ENST00000532117 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.3□□□□□ -0.28
RNPC3-207ENST00000532117 ZFP91Q96JP5 570 aaPredicted RBP13.3□□□□□ -0.28
RNPC3-207ENST00000532117 OCEL1Q9H607 264 aa13.28□□□□□ -0.28
RNPC3-207ENST00000532117 POTEJP0CG39 1038 aa13.25□□□□□ -0.29
RNPC3-207ENST00000532117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.23□□□□□ -0.29
RNPC3-207ENST00000532117 MAMSTRQ6ZN01 415 aa13.22□□□□□ -0.29
RNPC3-207ENST00000532117 OTUD5Q96G74 571 aa13.22□□□□□ -0.29
RNPC3-207ENST00000532117 EFCAB3Q8N7B9 438 aa13.21□□□□□ -0.29
RNPC3-207ENST00000532117 BCL11BQ9C0K0 894 aaPredicted RBP13.2□□□□□ -0.3
RNPC3-207ENST00000532117 PDCD7Q8N8D1 485 aaKnown RBP13.19□□□□□ -0.3
RNPC3-207ENST00000532117 STK25O00506 426 aa13.18□□□□□ -0.3
RNPC3-207ENST00000532117 STK24Q9Y6E0 443 aa13.18□□□□□ -0.3
RNPC3-207ENST00000532117 ILDR1Q86SU0 546 aaPredicted RBP13.16□□□□□ -0.3
RNPC3-207ENST00000532117 SCUBE2Q9NQ36 999 aa13.16□□□□□ -0.3
RNPC3-207ENST00000532117 SOX12O15370 315 aa13.14□□□□□ -0.31
RNPC3-207ENST00000532117 L3MBTL3Q96JM7 780 aaPredicted RBP13.1□□□□□ -0.31
RNPC3-207ENST00000532117 DPY19L2Q6NUT2 758 aa13.09□□□□□ -0.31
RNPC3-207ENST00000532117 PHF8Q9UPP1 1060 aa13.06□□□□□ -0.32
RNPC3-207ENST00000532117 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
RNPC3-207ENST00000532117 HS6ST3Q8IZP7 471 aa13.04□□□□□ -0.32
RNPC3-207ENST00000532117 CHGAP10645 457 aaKnown RBP13.03□□□□□ -0.32
RNPC3-207ENST00000532117 NLRP6P59044 892 aa13.03□□□□□ -0.32
RNPC3-207ENST00000532117 BOLA1Q9Y3E2 137 aa13.02□□□□□ -0.33
RNPC3-207ENST00000532117 G3V3G9 751 aa13.01□□□□□ -0.33
RNPC3-207ENST00000532117 MS4A4AQ96JQ5 239 aa13.01□□□□□ -0.33
RNPC3-207ENST00000532117 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.01□□□□□ -0.33
RNPC3-207ENST00000532117 DCAF8L2P0C7V8 631 aa12.99□□□□□ -0.33
RNPC3-207ENST00000532117 C3orf67Q6ZVT6 689 aa12.99□□□□□ -0.33
RNPC3-207ENST00000532117 SLAIN1Q8ND83 568 aa12.99□□□□□ -0.33
RNPC3-207ENST00000532117 MFRPQ9BY79 579 aa12.99□□□□□ -0.33
RNPC3-207ENST00000532117 FBXO22Q8NEZ5 403 aa12.98□□□□□ -0.33
RNPC3-207ENST00000532117 RTN4Q9NQC3 1192 aaKnown RBP12.98□□□□□ -0.33
RNPC3-207ENST00000532117 TMEM121BQ9BXQ6 578 aaPredicted RBP12.94□□□□□ -0.34
RNPC3-207ENST00000532117 MICALL2Q8IY33 904 aa12.9□□□□□ -0.34
RNPC3-207ENST00000532117 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
RNPC3-207ENST00000532117 NKX1-1Q15270 411 aaPredicted RBP12.85□□□□□ -0.35
RNPC3-207ENST00000532117 FAM163AQ96GL9 167 aaPredicted RBP12.83□□□□□ -0.36
RNPC3-207ENST00000532117 PPP1R37O75864 691 aa12.8□□□□□ -0.36
RNPC3-207ENST00000532117 SNPHO15079 494 aa12.79□□□□□ -0.36
RNPC3-207ENST00000532117 RYDENQ9NUL5 291 aaKnown RBP12.79□□□□□ -0.36
RNPC3-207ENST00000532117 TMEM92Q6UXU6 159 aa12.76□□□□□ -0.37
RNPC3-207ENST00000532117 LCE2DQ5TA82 110 aaPredicted RBP12.72□□□□□ -0.37
RNPC3-207ENST00000532117 GTPBP6O43824 516 aaPredicted RBP12.71□□□□□ -0.37
RNPC3-207ENST00000532117 ST18O60284 1047 aa12.69□□□□□ -0.38
RNPC3-207ENST00000532117 BBXQ8WY36 941 aaPredicted RBP12.69□□□□□ -0.38
RNPC3-207ENST00000532117 POTEGQ6S5H5 508 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms