RNA–Protein interactions for RNA: ENST00000531297.1

SOX6-214, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-214ENST00000531297 CCDC61Q9Y6R9 512 aa12.2□□□□□ -0.46
SOX6-214ENST00000531297 MS4A3Q96HJ5 214 aa12.19□□□□□ -0.46
SOX6-214ENST00000531297 ASTLQ6HA08 431 aaPredicted RBP12.14□□□□□ -0.47
SOX6-214ENST00000531297 SLC39A7Q92504 469 aa12.14□□□□□ -0.47
SOX6-214ENST00000531297 FAM212AQ96EL1 285 aa12.14□□□□□ -0.47
SOX6-214ENST00000531297 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
SOX6-214ENST00000531297 KIF12Q96FN5 646 aa12.13□□□□□ -0.47
SOX6-214ENST00000531297 C7P10643 843 aa12.12□□□□□ -0.47
SOX6-214ENST00000531297 SGIP1Q9BQI5 828 aa12.1□□□□□ -0.47
SOX6-214ENST00000531297 ATMINO43313 823 aaPredicted RBP12.09□□□□□ -0.47
SOX6-214ENST00000531297 METRNQ9UJH8 293 aa12.07□□□□□ -0.48
SOX6-214ENST00000531297 TIE1P35590 1138 aa12.06□□□□□ -0.48
SOX6-214ENST00000531297 MAP3K13O43283 966 aa12.05□□□□□ -0.48
SOX6-214ENST00000531297 NUBP1P53384 320 aa12.04□□□□□ -0.48
SOX6-214ENST00000531297 MAMSTRQ6ZN01 415 aa12.04□□□□□ -0.48
SOX6-214ENST00000531297 PCDHB13Q9Y5F0 798 aa12.02□□□□□ -0.49
SOX6-214ENST00000531297 PELP1Q8IZL8 1130 aaKnown RBP12□□□□□ -0.49
SOX6-214ENST00000531297 KLHL34Q8N239 644 aa12□□□□□ -0.49
SOX6-214ENST00000531297 ATN1P54259 1190 aaPredicted RBP11.97□□□□□ -0.49
SOX6-214ENST00000531297 DCAF8Q5TAQ9 597 aa11.97□□□□□ -0.49
SOX6-214ENST00000531297 BMP2KQ9NSY1 1161 aaPredicted RBP11.97□□□□□ -0.49
SOX6-214ENST00000531297 VASPP50552 380 aaPredicted RBP11.96□□□□□ -0.49
SOX6-214ENST00000531297 SCUBE2Q9NQ36 999 aa11.94□□□□□ -0.5
SOX6-214ENST00000531297 SEC24BO95487 1268 aa11.93□□□□□ -0.5
SOX6-214ENST00000531297 GSE1Q14687 1217 aa11.93□□□□□ -0.5
SOX6-214ENST00000531297 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
SOX6-214ENST00000531297 TTLL13PA6NNM8 815 aa11.91□□□□□ -0.5
SOX6-214ENST00000531297 IER5LQ5T953 404 aa11.91□□□□□ -0.5
SOX6-214ENST00000531297 POTEB2H3BUK9 544 aa11.89□□□□□ -0.51
SOX6-214ENST00000531297 IFNL1Q8IU54 200 aa11.87□□□□□ -0.51
SOX6-214ENST00000531297 TRIM35Q9UPQ4 493 aa11.87□□□□□ -0.51
SOX6-214ENST00000531297 TRPC6Q9Y210 931 aa11.87□□□□□ -0.51
SOX6-214ENST00000531297 TMEM106CQ9BVX2 250 aa11.85□□□□□ -0.51
SOX6-214ENST00000531297 PYGBP11216 843 aa11.82□□□□□ -0.52
SOX6-214ENST00000531297 ZNF467Q7Z7K2 595 aaPredicted RBP11.81□□□□□ -0.52
SOX6-214ENST00000531297 PLCG2P16885 1265 aa11.79□□□□□ -0.52
SOX6-214ENST00000531297 SPOCK2Q92563 424 aa11.76□□□□□ -0.53
SOX6-214ENST00000531297 GOLGA2Q08379 1002 aa11.75□□□□□ -0.53
SOX6-214ENST00000531297 CHRM1P11229 460 aaPredicted RBP11.74□□□□□ -0.53
SOX6-214ENST00000531297 COLQQ9Y215 455 aaPredicted RBP11.72□□□□□ -0.53
SOX6-214ENST00000531297 POTEFA5A3E0 1075 aa11.71□□□□□ -0.53
SOX6-214ENST00000531297 POTEJP0CG39 1038 aa11.71□□□□□ -0.53
SOX6-214ENST00000531297 PCDHB8Q9UN66 801 aa11.7□□□□□ -0.54
SOX6-214ENST00000531297 CIZ1Q9ULV3 898 aaPredicted RBP11.69□□□□□ -0.54
SOX6-214ENST00000531297 OCEL1Q9H607 264 aa11.68□□□□□ -0.54
SOX6-214ENST00000531297 MKRN3Q13064 507 aaKnown RBP11.67□□□□□ -0.54
SOX6-214ENST00000531297 POTEMA6NI47 508 aa11.66□□□□□ -0.54
SOX6-214ENST00000531297 TRIM41Q8WV44 630 aa11.66□□□□□ -0.54
SOX6-214ENST00000531297 PCDH10Q9P2E7 1040 aa11.66□□□□□ -0.54
SOX6-214ENST00000531297 IRX5P78411 483 aaPredicted RBP11.64□□□□□ -0.55
SOX6-214ENST00000531297 POTEGQ6S5H5 508 aa11.64□□□□□ -0.55
SOX6-214ENST00000531297 IFNLR1Q8IU57 520 aaPredicted RBP11.64□□□□□ -0.55
SOX6-214ENST00000531297 FAM163AQ96GL9 167 aaPredicted RBP11.63□□□□□ -0.55
SOX6-214ENST00000531297 PDAP1Q13442 181 aaKnown RBP11.62□□□□□ -0.55
SOX6-214ENST00000531297 PSEN1P49768 467 aa11.61□□□□□ -0.55
SOX6-214ENST00000531297 SLAIN1Q8ND83 568 aa11.6□□□□□ -0.55
SOX6-214ENST00000531297 L3MBTL3Q96JM7 780 aaPredicted RBP11.58□□□□□ -0.56
SOX6-214ENST00000531297 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.58□□□□□ -0.56
SOX6-214ENST00000531297 PLSCR2Q9NRY7 297 aa11.57□□□□□ -0.56
SOX6-214ENST00000531297 SNPHO15079 494 aa11.55□□□□□ -0.56
SOX6-214ENST00000531297 C3orf67Q6ZVT6 689 aa11.53□□□□□ -0.56
SOX6-214ENST00000531297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.53□□□□□ -0.56
SOX6-214ENST00000531297 G3V3G9 751 aa11.52□□□□□ -0.57
SOX6-214ENST00000531297 PDCD7Q8N8D1 485 aaKnown RBP11.45□□□□□ -0.58
SOX6-214ENST00000531297 CABP2Q9NPB3 220 aa11.45□□□□□ -0.58
SOX6-214ENST00000531297 TMEM121BQ9BXQ6 578 aaPredicted RBP11.44□□□□□ -0.58
SOX6-214ENST00000531297 TAOK2Q9UL54 1235 aa11.44□□□□□ -0.58
SOX6-214ENST00000531297 LCE2DQ5TA82 110 aaPredicted RBP11.41□□□□□ -0.58
SOX6-214ENST00000531297 RIOK3O14730 519 aaKnown RBP11.37□□□□□ -0.59
SOX6-214ENST00000531297 ST18O60284 1047 aa11.37□□□□□ -0.59
SOX6-214ENST00000531297 ILDR1Q86SU0 546 aaPredicted RBP11.36□□□□□ -0.59
SOX6-214ENST00000531297 VGFO15240 615 aaPredicted RBP11.35□□□□□ -0.59
SOX6-214ENST00000531297 BOLA1Q9Y3E2 137 aa11.35□□□□□ -0.59
SOX6-214ENST00000531297 CDAN1Q8IWY9 1227 aa11.32□□□□□ -0.6
SOX6-214ENST00000531297 SOX12O15370 315 aa11.3□□□□□ -0.6
SOX6-214ENST00000531297 EFCAB3Q8N7B9 438 aa11.28□□□□□ -0.6
SOX6-214ENST00000531297 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.24□□□□□ -0.61
SOX6-214ENST00000531297 DPY19L2Q6NUT2 758 aa11.24□□□□□ -0.61
SOX6-214ENST00000531297 ZFP91Q96JP5 570 aaPredicted RBP11.24□□□□□ -0.61
SOX6-214ENST00000531297 RIMBP2O15034 1052 aa11.23□□□□□ -0.61
SOX6-214ENST00000531297 EMP3P54852 163 aa11.22□□□□□ -0.61
SOX6-214ENST00000531297 ZNF710Q8N1W2 664 aa11.22□□□□□ -0.61
SOX6-214ENST00000531297 DOK7Q18PE1 504 aa11.21□□□□□ -0.61
SOX6-214ENST00000531297 RNF25Q96BH1 459 aaPredicted RBP11.19□□□□□ -0.62
SOX6-214ENST00000531297 ECM2O94769 699 aaPredicted RBP11.18□□□□□ -0.62
SOX6-214ENST00000531297 NLRP6P59044 892 aa11.18□□□□□ -0.62
SOX6-214ENST00000531297 MARVELD3Q96A59 401 aa11.18□□□□□ -0.62
SOX6-214ENST00000531297 MICALL2Q8IY33 904 aa11.14□□□□□ -0.63
SOX6-214ENST00000531297 BCL11BQ9C0K0 894 aaPredicted RBP11.14□□□□□ -0.63
SOX6-214ENST00000531297 STK24Q9Y6E0 443 aa11.14□□□□□ -0.63
SOX6-214ENST00000531297 STK25O00506 426 aa11.12□□□□□ -0.63
SOX6-214ENST00000531297 PHF8Q9UPP1 1060 aa11.12□□□□□ -0.63
SOX6-214ENST00000531297 FAM205CA6NFA0 338 aa11.09□□□□□ -0.63
SOX6-214ENST00000531297 ZSWIM6Q9HCJ5 1215 aa11.09□□□□□ -0.63
SOX6-214ENST00000531297 HOXB1P14653 301 aaPredicted RBP11.08□□□□□ -0.64
SOX6-214ENST00000531297 HS3ST6Q96QI5 342 aa11.08□□□□□ -0.64
SOX6-214ENST00000531297 HOXB3P14651 431 aaPredicted RBP11.06□□□□□ -0.64
SOX6-214ENST00000531297 MS4A4AQ96JQ5 239 aa11.05□□□□□ -0.64
SOX6-214ENST00000531297 ERBB3P21860 1342 aa11.04□□□□□ -0.64
SOX6-214ENST00000531297 SPNS2Q8IVW8 549 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms