RNA–Protein interactions for RNA: ENST00000531023.1

PSMA1-210, Transcript of proteasome subunit alpha 1, humanhuman

TSL 2

Gene PSMA1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-210ENST00000531023 CCDC61Q9Y6R9 512 aa13.07□□□□□ -0.32
PSMA1-210ENST00000531023 RASEFQ8IZ41 740 aa13.01□□□□□ -0.33
PSMA1-210ENST00000531023 KIF12Q96FN5 646 aa13□□□□□ -0.33
PSMA1-210ENST00000531023 FBXO3Q9UK99 471 aa12.98□□□□□ -0.33
PSMA1-210ENST00000531023 ASTLQ6HA08 431 aaPredicted RBP12.97□□□□□ -0.33
PSMA1-210ENST00000531023 ATMINO43313 823 aaPredicted RBP12.95□□□□□ -0.34
PSMA1-210ENST00000531023 PELP1Q8IZL8 1130 aaKnown RBP12.95□□□□□ -0.34
PSMA1-210ENST00000531023 MAP3K13O43283 966 aa12.92□□□□□ -0.34
PSMA1-210ENST00000531023 C7P10643 843 aa12.91□□□□□ -0.34
PSMA1-210ENST00000531023 SLC39A7Q92504 469 aa12.91□□□□□ -0.34
PSMA1-210ENST00000531023 NUBP1P53384 320 aa12.9□□□□□ -0.34
PSMA1-210ENST00000531023 FAM212AQ96EL1 285 aa12.89□□□□□ -0.35
PSMA1-210ENST00000531023 METRNQ9UJH8 293 aa12.89□□□□□ -0.35
PSMA1-210ENST00000531023 POTEB2H3BUK9 544 aa12.85□□□□□ -0.35
PSMA1-210ENST00000531023 ATN1P54259 1190 aaPredicted RBP12.85□□□□□ -0.35
PSMA1-210ENST00000531023 SGIP1Q9BQI5 828 aa12.85□□□□□ -0.35
PSMA1-210ENST00000531023 TIE1P35590 1138 aa12.84□□□□□ -0.35
PSMA1-210ENST00000531023 BMP2KQ9NSY1 1161 aaPredicted RBP12.83□□□□□ -0.36
PSMA1-210ENST00000531023 PCDHB13Q9Y5F0 798 aa12.83□□□□□ -0.36
PSMA1-210ENST00000531023 OTUD5Q96G74 571 aa12.82□□□□□ -0.36
PSMA1-210ENST00000531023 TRPC6Q9Y210 931 aa12.81□□□□□ -0.36
PSMA1-210ENST00000531023 DCAF8Q5TAQ9 597 aa12.78□□□□□ -0.36
PSMA1-210ENST00000531023 VASPP50552 380 aaPredicted RBP12.76□□□□□ -0.37
PSMA1-210ENST00000531023 MAMSTRQ6ZN01 415 aa12.76□□□□□ -0.37
PSMA1-210ENST00000531023 KLHL34Q8N239 644 aa12.76□□□□□ -0.37
PSMA1-210ENST00000531023 TTLL13PA6NNM8 815 aa12.75□□□□□ -0.37
PSMA1-210ENST00000531023 IFNL1Q8IU54 200 aa12.72□□□□□ -0.37
PSMA1-210ENST00000531023 SEC24BO95487 1268 aa12.69□□□□□ -0.38
PSMA1-210ENST00000531023 TRIM35Q9UPQ4 493 aa12.68□□□□□ -0.38
PSMA1-210ENST00000531023 SCUBE2Q9NQ36 999 aa12.67□□□□□ -0.38
PSMA1-210ENST00000531023 POTEJP0CG39 1038 aa12.66□□□□□ -0.38
PSMA1-210ENST00000531023 PYGBP11216 843 aa12.66□□□□□ -0.38
PSMA1-210ENST00000531023 IER5LQ5T953 404 aa12.66□□□□□ -0.38
PSMA1-210ENST00000531023 TMEM106CQ9BVX2 250 aa12.66□□□□□ -0.38
PSMA1-210ENST00000531023 GSE1Q14687 1217 aa12.65□□□□□ -0.38
PSMA1-210ENST00000531023 POTEFA5A3E0 1075 aa12.64□□□□□ -0.39
PSMA1-210ENST00000531023 COLQQ9Y215 455 aaPredicted RBP12.61□□□□□ -0.39
PSMA1-210ENST00000531023 PCDHB8Q9UN66 801 aa12.57□□□□□ -0.4
PSMA1-210ENST00000531023 PLCG2P16885 1265 aa12.53□□□□□ -0.4
PSMA1-210ENST00000531023 ZNF467Q7Z7K2 595 aaPredicted RBP12.53□□□□□ -0.4
PSMA1-210ENST00000531023 SPOCK2Q92563 424 aa12.53□□□□□ -0.4
PSMA1-210ENST00000531023 CHRM1P11229 460 aaPredicted RBP12.52□□□□□ -0.41
PSMA1-210ENST00000531023 IFNLR1Q8IU57 520 aaPredicted RBP12.5□□□□□ -0.41
PSMA1-210ENST00000531023 POTEMA6NI47 508 aa12.48□□□□□ -0.41
PSMA1-210ENST00000531023 IRX5P78411 483 aaPredicted RBP12.47□□□□□ -0.41
PSMA1-210ENST00000531023 POTEGQ6S5H5 508 aa12.46□□□□□ -0.41
PSMA1-210ENST00000531023 CIZ1Q9ULV3 898 aaPredicted RBP12.46□□□□□ -0.41
PSMA1-210ENST00000531023 FAM163AQ96GL9 167 aaPredicted RBP12.45□□□□□ -0.42
PSMA1-210ENST00000531023 OCEL1Q9H607 264 aa12.45□□□□□ -0.42
PSMA1-210ENST00000531023 GOLGA2Q08379 1002 aa12.44□□□□□ -0.42
PSMA1-210ENST00000531023 PSEN1P49768 467 aa12.39□□□□□ -0.43
PSMA1-210ENST00000531023 MKRN3Q13064 507 aaKnown RBP12.39□□□□□ -0.43
PSMA1-210ENST00000531023 SLAIN1Q8ND83 568 aa12.39□□□□□ -0.43
PSMA1-210ENST00000531023 PLSCR2Q9NRY7 297 aa12.38□□□□□ -0.43
PSMA1-210ENST00000531023 PDAP1Q13442 181 aaKnown RBP12.36□□□□□ -0.43
PSMA1-210ENST00000531023 PCDH10Q9P2E7 1040 aa12.34□□□□□ -0.43
PSMA1-210ENST00000531023 LCE2DQ5TA82 110 aaPredicted RBP12.33□□□□□ -0.44
PSMA1-210ENST00000531023 TRIM41Q8WV44 630 aa12.31□□□□□ -0.44
PSMA1-210ENST00000531023 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.31□□□□□ -0.44
PSMA1-210ENST00000531023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.29□□□□□ -0.44
PSMA1-210ENST00000531023 PDCD7Q8N8D1 485 aaKnown RBP12.28□□□□□ -0.44
PSMA1-210ENST00000531023 L3MBTL3Q96JM7 780 aaPredicted RBP12.28□□□□□ -0.44
PSMA1-210ENST00000531023 C3orf67Q6ZVT6 689 aa12.24□□□□□ -0.45
PSMA1-210ENST00000531023 CABP2Q9NPB3 220 aa12.24□□□□□ -0.45
PSMA1-210ENST00000531023 SNPHO15079 494 aa12.22□□□□□ -0.45
PSMA1-210ENST00000531023 ST18O60284 1047 aa12.19□□□□□ -0.46
PSMA1-210ENST00000531023 G3V3G9 751 aa12.17□□□□□ -0.46
PSMA1-210ENST00000531023 ILDR1Q86SU0 546 aaPredicted RBP12.17□□□□□ -0.46
PSMA1-210ENST00000531023 TMEM121BQ9BXQ6 578 aaPredicted RBP12.13□□□□□ -0.47
PSMA1-210ENST00000531023 DPY19L2Q6NUT2 758 aa12.12□□□□□ -0.47
PSMA1-210ENST00000531023 RIOK3O14730 519 aaKnown RBP12.11□□□□□ -0.47
PSMA1-210ENST00000531023 CDAN1Q8IWY9 1227 aa12.1□□□□□ -0.47
PSMA1-210ENST00000531023 EFCAB3Q8N7B9 438 aa12.09□□□□□ -0.47
PSMA1-210ENST00000531023 BOLA1Q9Y3E2 137 aa12.09□□□□□ -0.47
PSMA1-210ENST00000531023 VGFO15240 615 aaPredicted RBP12.06□□□□□ -0.48
PSMA1-210ENST00000531023 RNF25Q96BH1 459 aaPredicted RBP12.04□□□□□ -0.48
PSMA1-210ENST00000531023 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.03□□□□□ -0.48
PSMA1-210ENST00000531023 ZFP91Q96JP5 570 aaPredicted RBP12.03□□□□□ -0.48
PSMA1-210ENST00000531023 TAOK2Q9UL54 1235 aa12.03□□□□□ -0.48
PSMA1-210ENST00000531023 SOX12O15370 315 aa12.02□□□□□ -0.49
PSMA1-210ENST00000531023 MARVELD3Q96A59 401 aa12.01□□□□□ -0.49
PSMA1-210ENST00000531023 EMP3P54852 163 aa11.96□□□□□ -0.49
PSMA1-210ENST00000531023 MICALL2Q8IY33 904 aa11.91□□□□□ -0.5
PSMA1-210ENST00000531023 PHF8Q9UPP1 1060 aa11.91□□□□□ -0.5
PSMA1-210ENST00000531023 ECM2O94769 699 aaPredicted RBP11.9□□□□□ -0.5
PSMA1-210ENST00000531023 DOK7Q18PE1 504 aa11.9□□□□□ -0.5
PSMA1-210ENST00000531023 ZNF710Q8N1W2 664 aa11.9□□□□□ -0.5
PSMA1-210ENST00000531023 BCL11BQ9C0K0 894 aaPredicted RBP11.9□□□□□ -0.5
PSMA1-210ENST00000531023 HOXB3P14651 431 aaPredicted RBP11.88□□□□□ -0.51
PSMA1-210ENST00000531023 NLRP6P59044 892 aa11.88□□□□□ -0.51
PSMA1-210ENST00000531023 MS4A4AQ96JQ5 239 aa11.88□□□□□ -0.51
PSMA1-210ENST00000531023 STK24Q9Y6E0 443 aa11.88□□□□□ -0.51
PSMA1-210ENST00000531023 FAM205CA6NFA0 338 aa11.86□□□□□ -0.51
PSMA1-210ENST00000531023 RIMBP2O15034 1052 aa11.86□□□□□ -0.51
PSMA1-210ENST00000531023 STK25O00506 426 aa11.85□□□□□ -0.51
PSMA1-210ENST00000531023 HS3ST6Q96QI5 342 aa11.84□□□□□ -0.51
PSMA1-210ENST00000531023 HOXB1P14653 301 aaPredicted RBP11.82□□□□□ -0.52
PSMA1-210ENST00000531023 PKD2Q13563 968 aa11.8□□□□□ -0.52
PSMA1-210ENST00000531023 TMEM92Q6UXU6 159 aa11.8□□□□□ -0.52
PSMA1-210ENST00000531023 SPNS2Q8IVW8 549 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms