RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 DCAF8Q5TAQ9 597 aa13.67□□□□□ -0.22
CAPRIN1-208ENST00000530008 RIOK3O14730 519 aaKnown RBP13.66□□□□□ -0.22
CAPRIN1-208ENST00000530008 NBR1Q14596 966 aa13.66□□□□□ -0.22
CAPRIN1-208ENST00000530008 CACNB1Q02641 598 aaPredicted RBP13.65□□□□□ -0.22
CAPRIN1-208ENST00000530008 NKX1-1Q15270 411 aaPredicted RBP13.64□□□□□ -0.23
CAPRIN1-208ENST00000530008 SPDYE1Q8NFV5 336 aaPredicted RBP13.61□□□□□ -0.23
CAPRIN1-208ENST00000530008 GTPBP6O43824 516 aaPredicted RBP13.59□□□□□ -0.23
CAPRIN1-208ENST00000530008 FAM212AQ96EL1 285 aa13.57□□□□□ -0.24
CAPRIN1-208ENST00000530008 VGFO15240 615 aaPredicted RBP13.56□□□□□ -0.24
CAPRIN1-208ENST00000530008 CREBZFQ9NS37 354 aa13.56□□□□□ -0.24
CAPRIN1-208ENST00000530008 STK25O00506 426 aa13.55□□□□□ -0.24
CAPRIN1-208ENST00000530008 CHRM1P11229 460 aaPredicted RBP13.52□□□□□ -0.25
CAPRIN1-208ENST00000530008 MNX1P50219 401 aaPredicted RBP13.52□□□□□ -0.25
CAPRIN1-208ENST00000530008 AKT1S1Q96B36 256 aa13.52□□□□□ -0.25
CAPRIN1-208ENST00000530008 PRR29P0C7W0 189 aa13.51□□□□□ -0.25
CAPRIN1-208ENST00000530008 CLEC11AQ9Y240 323 aa13.5□□□□□ -0.25
CAPRIN1-208ENST00000530008 RBM42Q9BTD8 480 aaKnown RBP13.48□□□□□ -0.25
CAPRIN1-208ENST00000530008 RASEFQ8IZ41 740 aa13.47□□□□□ -0.25
CAPRIN1-208ENST00000530008 SGIP1Q9BQI5 828 aa13.47□□□□□ -0.25
CAPRIN1-208ENST00000530008 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.43□□□□□ -0.26
CAPRIN1-208ENST00000530008 ZFP91Q96JP5 570 aaPredicted RBP13.43□□□□□ -0.26
CAPRIN1-208ENST00000530008 BCL11BQ9C0K0 894 aaPredicted RBP13.43□□□□□ -0.26
CAPRIN1-208ENST00000530008 STK24Q9Y6E0 443 aa13.43□□□□□ -0.26
CAPRIN1-208ENST00000530008 RYDENQ9NUL5 291 aaKnown RBP13.41□□□□□ -0.26
CAPRIN1-208ENST00000530008 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
CAPRIN1-208ENST00000530008 PYGBP11216 843 aa13.37□□□□□ -0.27
CAPRIN1-208ENST00000530008 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
CAPRIN1-208ENST00000530008 P3H3Q8IVL6 736 aa13.24□□□□□ -0.29
CAPRIN1-208ENST00000530008 ZNF467Q7Z7K2 595 aaPredicted RBP13.2□□□□□ -0.3
CAPRIN1-208ENST00000530008 CADPS2Q86UW7 1296 aa13.16□□□□□ -0.3
CAPRIN1-208ENST00000530008 TSPYL2Q9H2G4 693 aaPredicted RBP13.15□□□□□ -0.3
CAPRIN1-208ENST00000530008 WDR70Q9NW82 654 aa13.15□□□□□ -0.3
CAPRIN1-208ENST00000530008 PDAP1Q13442 181 aaKnown RBP13.14□□□□□ -0.31
CAPRIN1-208ENST00000530008 KCNV2Q8TDN2 545 aa13.12□□□□□ -0.31
CAPRIN1-208ENST00000530008 GTF3C3Q9Y5Q9 886 aa13.11□□□□□ -0.31
CAPRIN1-208ENST00000530008 CHADLQ6NUI6 762 aa13.1□□□□□ -0.31
CAPRIN1-208ENST00000530008 TIMELESSQ9UNS1 1208 aa13.1□□□□□ -0.31
CAPRIN1-208ENST00000530008 TULP1O00294 542 aaPredicted RBP13.09□□□□□ -0.31
CAPRIN1-208ENST00000530008 PCDHB8Q9UN66 801 aa13.09□□□□□ -0.31
CAPRIN1-208ENST00000530008 PCDHB13Q9Y5F0 798 aa13.09□□□□□ -0.31
CAPRIN1-208ENST00000530008 FARP1Q9Y4F1 1045 aaPredicted RBP13.07□□□□□ -0.32
CAPRIN1-208ENST00000530008 PSEN1P49768 467 aa13.05□□□□□ -0.32
CAPRIN1-208ENST00000530008 TMEM132AQ24JP5 1023 aa13.05□□□□□ -0.32
CAPRIN1-208ENST00000530008 LMOD2Q6P5Q4 547 aa13.05□□□□□ -0.32
CAPRIN1-208ENST00000530008 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.05□□□□□ -0.32
CAPRIN1-208ENST00000530008 MFRPQ9BY79 579 aa13.05□□□□□ -0.32
CAPRIN1-208ENST00000530008 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
CAPRIN1-208ENST00000530008 CCDC61Q9Y6R9 512 aa13.01□□□□□ -0.33
CAPRIN1-208ENST00000530008 PPP1R37O75864 691 aa12.95□□□□□ -0.34
CAPRIN1-208ENST00000530008 ERICH6Q7L0X2 663 aa12.95□□□□□ -0.34
CAPRIN1-208ENST00000530008 ARHGEF1Q92888 912 aaKnown RBP12.95□□□□□ -0.34
CAPRIN1-208ENST00000530008 FBXO22Q8NEZ5 403 aa12.92□□□□□ -0.34
CAPRIN1-208ENST00000530008 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
CAPRIN1-208ENST00000530008 NLRP6P59044 892 aa12.91□□□□□ -0.34
CAPRIN1-208ENST00000530008 IFNL1Q8IU54 200 aa12.91□□□□□ -0.34
CAPRIN1-208ENST00000530008 EFCAB3Q8N7B9 438 aa12.91□□□□□ -0.34
CAPRIN1-208ENST00000530008 E2F4Q16254 413 aa12.9□□□□□ -0.34
CAPRIN1-208ENST00000530008 SOX12O15370 315 aa12.89□□□□□ -0.35
CAPRIN1-208ENST00000530008 CABP2Q9NPB3 220 aa12.88□□□□□ -0.35
CAPRIN1-208ENST00000530008 PHF8Q9UPP1 1060 aa12.87□□□□□ -0.35
CAPRIN1-208ENST00000530008 PAK3O75914 559 aaPredicted RBP12.86□□□□□ -0.35
CAPRIN1-208ENST00000530008 MAP3K13O43283 966 aa12.85□□□□□ -0.35
CAPRIN1-208ENST00000530008 ZC3H15Q8WU90 426 aaKnown RBP12.84□□□□□ -0.35
CAPRIN1-208ENST00000530008 KIF12Q96FN5 646 aa12.84□□□□□ -0.35
CAPRIN1-208ENST00000530008 TESPA1A2RU30 521 aaPredicted RBP12.83□□□□□ -0.36
CAPRIN1-208ENST00000530008 BRPF1P55201 1214 aaPredicted RBP12.83□□□□□ -0.36
CAPRIN1-208ENST00000530008 SEMA3EO15041 775 aa12.82□□□□□ -0.36
CAPRIN1-208ENST00000530008 FXR2P51116 673 aaKnown RBP eCLIP12.81□□□□□ -0.362e-6■□□□□ 8.6
CAPRIN1-208ENST00000530008 NCKAP5LQ9HCH0 1330 aa12.79□□□□□ -0.36
CAPRIN1-208ENST00000530008 PDE4AP27815 886 aa12.75□□□□□ -0.37
CAPRIN1-208ENST00000530008 C14orf37Q86TY3 774 aa12.75□□□□□ -0.37
CAPRIN1-208ENST00000530008 LARP6Q9BRS8 491 aaKnown RBP12.75□□□□□ -0.37
CAPRIN1-208ENST00000530008 SLC24A3Q9HC58 644 aa12.74□□□□□ -0.37
CAPRIN1-208ENST00000530008 MFSD10Q14728 455 aa12.73□□□□□ -0.37
CAPRIN1-208ENST00000530008 NEUROD2Q15784 382 aa12.72□□□□□ -0.37
CAPRIN1-208ENST00000530008 MS4A4AQ96JQ5 239 aa12.72□□□□□ -0.37
CAPRIN1-208ENST00000530008 SMYD5Q6GMV2 418 aa12.71□□□□□ -0.37
CAPRIN1-208ENST00000530008 CRISPLD2Q9H0B8 497 aa12.7□□□□□ -0.38
CAPRIN1-208ENST00000530008 ARIH1Q9Y4X5 557 aaPredicted RBP12.7□□□□□ -0.38
CAPRIN1-208ENST00000530008 ZMYND10O75800 440 aa12.68□□□□□ -0.38
CAPRIN1-208ENST00000530008 DDX27Q96GQ7 796 aaKnown RBP12.68□□□□□ -0.38
CAPRIN1-208ENST00000530008 ARXQ96QS3 562 aa12.67□□□□□ -0.38
CAPRIN1-208ENST00000530008 ZRANB1Q9UGI0 708 aa12.66□□□□□ -0.38
CAPRIN1-208ENST00000530008 CAMK2BQ13554 666 aa12.64□□□□□ -0.39
CAPRIN1-208ENST00000530008 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
CAPRIN1-208ENST00000530008 GOLGA2Q08379 1002 aa12.63□□□□□ -0.39
CAPRIN1-208ENST00000530008 PHF12Q96QT6 1004 aa12.63□□□□□ -0.39
CAPRIN1-208ENST00000530008 TMEM106CQ9BVX2 250 aa12.61□□□□□ -0.39
CAPRIN1-208ENST00000530008 CD44P16070 742 aaKnown RBP12.59□□□□□ -0.39
CAPRIN1-208ENST00000530008 CHRDL2Q6WN34 429 aa12.59□□□□□ -0.39
CAPRIN1-208ENST00000530008 BARGINQ6ZT62 677 aa12.59□□□□□ -0.39
CAPRIN1-208ENST00000530008 MKRN3Q13064 507 aaKnown RBP12.56□□□□□ -0.4
CAPRIN1-208ENST00000530008 MLLT3P42568 568 aaPredicted RBP12.52□□□□□ -0.41
CAPRIN1-208ENST00000530008 RBM26Q5T8P6 1007 aaKnown RBP12.52□□□□□ -0.41
CAPRIN1-208ENST00000530008 TRPC6Q9Y210 931 aa12.52□□□□□ -0.41
CAPRIN1-208ENST00000530008 PPP1R15BQ5SWA1 713 aa12.51□□□□□ -0.41
CAPRIN1-208ENST00000530008 GPIHBP1Q8IV16 184 aa12.5□□□□□ -0.41
CAPRIN1-208ENST00000530008 AK7Q96M32 723 aa12.5□□□□□ -0.41
CAPRIN1-208ENST00000530008 MS4A3Q96HJ5 214 aa12.49□□□□□ -0.41
CAPRIN1-208ENST00000530008 GPHNQ9NQX3 736 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms