RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 CD44P16070 742 aaKnown RBP13.15□□□□□ -0.3
NUP98-216ENST00000529379 SP7Q8TDD2 431 aaPredicted RBP13.15□□□□□ -0.3
NUP98-216ENST00000529379 FAM212AQ96EL1 285 aa13.13□□□□□ -0.31
NUP98-216ENST00000529379 RGL2O15211 777 aa13.09□□□□□ -0.31
NUP98-216ENST00000529379 TRIM41Q8WV44 630 aa13.07□□□□□ -0.32
NUP98-216ENST00000529379 DCAF8L2P0C7V8 631 aa13.06□□□□□ -0.32
NUP98-216ENST00000529379 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
NUP98-216ENST00000529379 ZRANB1Q9UGI0 708 aa13.03□□□□□ -0.32
NUP98-216ENST00000529379 ZNF579Q8NAF0 562 aaKnown RBP13□□□□□ -0.33
NUP98-216ENST00000529379 RNF25Q96BH1 459 aaPredicted RBP12.99□□□□□ -0.33
NUP98-216ENST00000529379 PYGBP11216 843 aa12.98□□□□□ -0.33
NUP98-216ENST00000529379 GABBR2O75899 941 aa12.97□□□□□ -0.33
NUP98-216ENST00000529379 CHRM1P11229 460 aaPredicted RBP12.97□□□□□ -0.33
NUP98-216ENST00000529379 PHF12Q96QT6 1004 aa12.97□□□□□ -0.33
NUP98-216ENST00000529379 CCDC61Q9Y6R9 512 aa12.95□□□□□ -0.34
NUP98-216ENST00000529379 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
NUP98-216ENST00000529379 RIOK3O14730 519 aaKnown RBP12.89□□□□□ -0.35
NUP98-216ENST00000529379 GALR2O43603 387 aaPredicted RBP12.85□□□□□ -0.35
NUP98-216ENST00000529379 CHGAP10645 457 aaKnown RBP12.83□□□□□ -0.36
NUP98-216ENST00000529379 KIF12Q96FN5 646 aa12.83□□□□□ -0.36
NUP98-216ENST00000529379 VGFO15240 615 aaPredicted RBP12.8□□□□□ -0.36
NUP98-216ENST00000529379 POTEIP0CG38 1075 aa12.79□□□□□ -0.36
NUP98-216ENST00000529379 MS4A3Q96HJ5 214 aa12.79□□□□□ -0.36
NUP98-216ENST00000529379 MAP3K13O43283 966 aa12.78□□□□□ -0.36
NUP98-216ENST00000529379 TAOK2Q9UL54 1235 aa12.78□□□□□ -0.36
NUP98-216ENST00000529379 PCDHB8Q9UN66 801 aa12.78□□□□□ -0.36
NUP98-216ENST00000529379 PCDHB13Q9Y5F0 798 aa12.78□□□□□ -0.36
NUP98-216ENST00000529379 CLCN6P51797 869 aa12.77□□□□□ -0.37
NUP98-216ENST00000529379 ZNF467Q7Z7K2 595 aaPredicted RBP12.77□□□□□ -0.37
NUP98-216ENST00000529379 HS6ST3Q8IZP7 471 aa12.77□□□□□ -0.37
NUP98-216ENST00000529379 BBXQ8WY36 941 aaPredicted RBP12.77□□□□□ -0.37
NUP98-216ENST00000529379 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.75□□□□□ -0.37
NUP98-216ENST00000529379 ZFP91Q96JP5 570 aaPredicted RBP12.75□□□□□ -0.37
NUP98-216ENST00000529379 SGIP1Q9BQI5 828 aa12.75□□□□□ -0.37
NUP98-216ENST00000529379 IFNL1Q8IU54 200 aa12.73□□□□□ -0.37
NUP98-216ENST00000529379 STK25O00506 426 aa12.72□□□□□ -0.37
NUP98-216ENST00000529379 SLC24A1O60721 1099 aa12.72□□□□□ -0.37
NUP98-216ENST00000529379 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
NUP98-216ENST00000529379 TRPC6Q9Y210 931 aa12.72□□□□□ -0.37
NUP98-216ENST00000529379 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.69□□□□□ -0.38
NUP98-216ENST00000529379 PDAP1Q13442 181 aaKnown RBP12.68□□□□□ -0.38
NUP98-216ENST00000529379 BCL11BQ9C0K0 894 aaPredicted RBP12.68□□□□□ -0.38
NUP98-216ENST00000529379 DNAJC5Q9H3Z4 198 aa12.67□□□□□ -0.38
NUP98-216ENST00000529379 STK24Q9Y6E0 443 aa12.67□□□□□ -0.38
NUP98-216ENST00000529379 PSEN1P49768 467 aa12.65□□□□□ -0.38
NUP98-216ENST00000529379 NKX1-1Q15270 411 aaPredicted RBP12.63□□□□□ -0.39
NUP98-216ENST00000529379 PAXIP1Q6ZW49 1069 aaPredicted RBP12.63□□□□□ -0.39
NUP98-216ENST00000529379 PELP1Q8IZL8 1130 aaKnown RBP12.62□□□□□ -0.39
NUP98-216ENST00000529379 DCBLD2Q96PD2 775 aa12.62□□□□□ -0.39
NUP98-216ENST00000529379 CFAP44Q96MT7 982 aa12.61□□□□□ -0.39
NUP98-216ENST00000529379 ATMINO43313 823 aaPredicted RBP12.59□□□□□ -0.39
NUP98-216ENST00000529379 SPRYD3Q8NCJ5 442 aa12.59□□□□□ -0.39
NUP98-216ENST00000529379 BMP2KQ9NSY1 1161 aaPredicted RBP12.59□□□□□ -0.39
NUP98-216ENST00000529379 ASTLQ6HA08 431 aaPredicted RBP12.58□□□□□ -0.4
NUP98-216ENST00000529379 ATN1P54259 1190 aaPredicted RBP12.55□□□□□ -0.4
NUP98-216ENST00000529379 HAP1P54257 671 aaPredicted RBP12.54□□□□□ -0.4
NUP98-216ENST00000529379 TTLL13PA6NNM8 815 aa12.53□□□□□ -0.4
NUP98-216ENST00000529379 TIE1P35590 1138 aa12.53□□□□□ -0.4
NUP98-216ENST00000529379 GTPBP6O43824 516 aaPredicted RBP12.52□□□□□ -0.41
NUP98-216ENST00000529379 TMEM106CQ9BVX2 250 aa12.5□□□□□ -0.41
NUP98-216ENST00000529379 CABP2Q9NPB3 220 aa12.5□□□□□ -0.41
NUP98-216ENST00000529379 EFCAB3Q8N7B9 438 aa12.47□□□□□ -0.41
NUP98-216ENST00000529379 MFRPQ9BY79 579 aa12.44□□□□□ -0.42
NUP98-216ENST00000529379 TSHZ2Q9NRE2 1034 aa12.42□□□□□ -0.42
NUP98-216ENST00000529379 TRIM35Q9UPQ4 493 aa12.42□□□□□ -0.42
NUP98-216ENST00000529379 POTEFA5A3E0 1075 aa12.41□□□□□ -0.42
NUP98-216ENST00000529379 POTEB2H3BUK9 544 aa12.4□□□□□ -0.42
NUP98-216ENST00000529379 RYDENQ9NUL5 291 aaKnown RBP12.4□□□□□ -0.42
NUP98-216ENST00000529379 SOX12O15370 315 aa12.39□□□□□ -0.43
NUP98-216ENST00000529379 METRNQ9UJH8 293 aa12.39□□□□□ -0.43
NUP98-216ENST00000529379 PHF8Q9UPP1 1060 aa12.39□□□□□ -0.43
NUP98-216ENST00000529379 GOLGA2Q08379 1002 aa12.38□□□□□ -0.43
NUP98-216ENST00000529379 FBXO22Q8NEZ5 403 aa12.37□□□□□ -0.43
NUP98-216ENST00000529379 SLC39A7Q92504 469 aa12.37□□□□□ -0.43
NUP98-216ENST00000529379 C7P10643 843 aa12.36□□□□□ -0.43
NUP98-216ENST00000529379 COLQQ9Y215 455 aaPredicted RBP12.35□□□□□ -0.43
NUP98-216ENST00000529379 NLRP6P59044 892 aa12.34□□□□□ -0.43
NUP98-216ENST00000529379 MKRN3Q13064 507 aaKnown RBP12.34□□□□□ -0.43
NUP98-216ENST00000529379 LHX8Q68G74 356 aa12.33□□□□□ -0.44
NUP98-216ENST00000529379 VSIG10Q8N0Z9 540 aa12.33□□□□□ -0.44
NUP98-216ENST00000529379 POTEJP0CG39 1038 aa12.32□□□□□ -0.44
NUP98-216ENST00000529379 MS4A4AQ96JQ5 239 aa12.31□□□□□ -0.44
NUP98-216ENST00000529379 KDM2AQ9Y2K7 1162 aa12.31□□□□□ -0.44
NUP98-216ENST00000529379 PPP1R37O75864 691 aa12.3□□□□□ -0.44
NUP98-216ENST00000529379 IER5LQ5T953 404 aa12.29□□□□□ -0.44
NUP98-216ENST00000529379 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
NUP98-216ENST00000529379 ILDR1Q86SU0 546 aaPredicted RBP12.26□□□□□ -0.45
NUP98-216ENST00000529379 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.25□□□□□ -0.457e-7■■■□□ 18.8
NUP98-216ENST00000529379 PDCD7Q8N8D1 485 aaKnown RBP12.21□□□□□ -0.45
NUP98-216ENST00000529379 CADPS2Q86UW7 1296 aa12.2□□□□□ -0.46
NUP98-216ENST00000529379 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
NUP98-216ENST00000529379 SEC24BO95487 1268 aa12.18□□□□□ -0.46
NUP98-216ENST00000529379 DPY19L2Q6NUT2 758 aa12.18□□□□□ -0.46
NUP98-216ENST00000529379 OCEL1Q9H607 264 aa12.17□□□□□ -0.46
NUP98-216ENST00000529379 PLCG2P16885 1265 aa12.15□□□□□ -0.46
NUP98-216ENST00000529379 MICALL2Q8IY33 904 aa12.05□□□□□ -0.48
NUP98-216ENST00000529379 NCKAP5LQ9HCH0 1330 aa12.05□□□□□ -0.48
NUP98-216ENST00000529379 BOLA1Q9Y3E2 137 aa12.03□□□□□ -0.48
NUP98-216ENST00000529379 TMEM121BQ9BXQ6 578 aaPredicted RBP12.02□□□□□ -0.49
NUP98-216ENST00000529379 CRISPLD2Q9H0B8 497 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms