RNA–Protein interactions for RNA: ENST00000528987.1

CD59-211, Transcript of CD59 molecule (CD59 blood group), humanhuman

TSL 1 (best)

Gene CD59, Length 3,716 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD59-211ENST00000528987 ZMYND15Q9H091 742 aa8.61□□□□□ -1.03
CD59-211ENST00000528987 APBB1O00213 710 aa8.6□□□□□ -1.03
CD59-211ENST00000528987 SPOCK2Q92563 424 aa8.59□□□□□ -1.03
CD59-211ENST00000528987 RAD21O60216 631 aa8.58□□□□□ -1.04
CD59-211ENST00000528987 KCTD17Q8N5Z5 321 aa8.58□□□□□ -1.04
CD59-211ENST00000528987 SLC24A3Q9HC58 644 aa8.58□□□□□ -1.04
CD59-211ENST00000528987 ZNF428Q96B54 188 aa8.57□□□□□ -1.04
CD59-211ENST00000528987 DNAJC5Q9H3Z4 198 aa8.57□□□□□ -1.04
CD59-211ENST00000528987 AEBP1Q8IUX7 1158 aa8.56□□□□□ -1.04
CD59-211ENST00000528987 DNAJC5BQ9UF47 199 aa8.56□□□□□ -1.04
CD59-211ENST00000528987 RBM25P49756 843 aaKnown RBP8.54□□□□□ -1.04
CD59-211ENST00000528987 CHMP4AQ9BY43 222 aa8.54□□□□□ -1.04
CD59-211ENST00000528987 POLR3GLQ9BT43 218 aa8.54□□□□□ -1.04
CD59-211ENST00000528987 FOXD4L5Q5VV16 416 aaPredicted RBP8.51□□□□□ -1.05
CD59-211ENST00000528987 IL27Q8NEV9 243 aa8.51□□□□□ -1.05
CD59-211ENST00000528987 FOXD4L4Q8WXT5 416 aaPredicted RBP8.51□□□□□ -1.05
CD59-211ENST00000528987 SHROOM4Q9ULL8 1493 aa8.51□□□□□ -1.05
CD59-211ENST00000528987 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.49□□□□□ -1.05
CD59-211ENST00000528987 PLCD3Q8N3E9 789 aa8.49□□□□□ -1.05
CD59-211ENST00000528987 GPBP1L1Q9HC44 474 aaPredicted RBP8.47□□□□□ -1.05
CD59-211ENST00000528987 MTMR7Q9Y216 660 aa8.45□□□□□ -1.06
CD59-211ENST00000528987 USP35Q9P2H5 1018 aa8.45□□□□□ -1.06
CD59-211ENST00000528987 PABPN1Q86U42 306 aaKnown RBP eCLIP8.44□□□□□ -1.06
CD59-211ENST00000528987 HSP90B1P14625 803 aaKnown RBP8.44□□□□□ -1.06
CD59-211ENST00000528987 DHX37Q8IY37 1157 aaKnown RBP8.44□□□□□ -1.06
CD59-211ENST00000528987 WDR70Q9NW82 654 aa8.43□□□□□ -1.06
CD59-211ENST00000528987 RB1CC1Q8TDY2 1594 aa8.42□□□□□ -1.06
CD59-211ENST00000528987 NKX1-1Q15270 411 aaPredicted RBP8.42□□□□□ -1.06
CD59-211ENST00000528987 MYT1LQ9UL68 1186 aa8.41□□□□□ -1.06
CD59-211ENST00000528987 CCDC82Q8N4S0 544 aa8.41□□□□□ -1.06
CD59-211ENST00000528987 ZC3H15Q8WU90 426 aaKnown RBP8.41□□□□□ -1.06
CD59-211ENST00000528987 HMGB1P09429 215 aaKnown RBP8.4□□□□□ -1.06
CD59-211ENST00000528987 FAM9AQ8IZU1 332 aaPredicted RBP8.4□□□□□ -1.06
CD59-211ENST00000528987 KCNV2Q8TDN2 545 aa8.4□□□□□ -1.06
CD59-211ENST00000528987 SAMD1Q6SPF0 538 aaPredicted RBP8.37□□□□□ -1.07
CD59-211ENST00000528987 P3H3Q8IVL6 736 aa8.37□□□□□ -1.07
CD59-211ENST00000528987 MKRN3Q13064 507 aaKnown RBP8.37□□□□□ -1.07
CD59-211ENST00000528987 MKRN4PQ13434 485 aaPredicted RBP8.37□□□□□ -1.07
CD59-211ENST00000528987 ZNF219Q9P2Y4 722 aaPredicted RBP8.37□□□□□ -1.07
CD59-211ENST00000528987 TMCO4Q5TGY1 634 aa8.36□□□□□ -1.07
CD59-211ENST00000528987 GTPBP6O43824 516 aaPredicted RBP8.36□□□□□ -1.07
CD59-211ENST00000528987 HS6ST3Q8IZP7 471 aa8.36□□□□□ -1.07
CD59-211ENST00000528987 DCAF8L1A6NGE4 600 aa8.35□□□□□ -1.07
CD59-211ENST00000528987 NACADO15069 1562 aa8.35□□□□□ -1.07
CD59-211ENST00000528987 MIER1Q8N108 512 aa8.34□□□□□ -1.07
CD59-211ENST00000528987 PROM2Q8N271 834 aa8.34□□□□□ -1.07
CD59-211ENST00000528987 STK25O00506 426 aa8.33□□□□□ -1.08
CD59-211ENST00000528987 GZF1Q9H116 711 aaPredicted RBP8.33□□□□□ -1.08
CD59-211ENST00000528987 MFAP1P55081 439 aaKnown RBP8.3□□□□□ -1.08
CD59-211ENST00000528987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.3□□□□□ -1.08
CD59-211ENST00000528987 RNF25Q96BH1 459 aaPredicted RBP8.28□□□□□ -1.08
CD59-211ENST00000528987 CLUAP1Q96AJ1 413 aa8.28□□□□□ -1.08
CD59-211ENST00000528987 HOXD11P31277 338 aaPredicted RBP8.27□□□□□ -1.09
CD59-211ENST00000528987 SEMA3EO15041 775 aa8.27□□□□□ -1.09
CD59-211ENST00000528987 FBXW7Q969H0 707 aa8.26□□□□□ -1.09
CD59-211ENST00000528987 ZCCHC6Q5VYS8 1495 aaKnown RBP8.25□□□□□ -1.09
CD59-211ENST00000528987 RGS22Q8NE09 1264 aa8.24□□□□□ -1.09
CD59-211ENST00000528987 ZNF777Q9ULD5 760 aaPredicted RBP8.23□□□□□ -1.09
CD59-211ENST00000528987 E9PSI1 815 aa8.23□□□□□ -1.09
CD59-211ENST00000528987 PPM1GO15355 546 aaPredicted RBP8.23□□□□□ -1.09
CD59-211ENST00000528987 KRI1Q8N9T8 703 aaKnown RBP8.23□□□□□ -1.09
CD59-211ENST00000528987 PUS7Q96PZ0 661 aaKnown RBP8.21□□□□□ -1.09
CD59-211ENST00000528987 KDM4CQ9H3R0 1056 aa8.2□□□□□ -1.1
CD59-211ENST00000528987 SCRIBQ14160 1630 aa8.19□□□□□ -1.1
CD59-211ENST00000528987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.19□□□□□ -1.1
CD59-211ENST00000528987 HNRNPUL2Q1KMD3 747 aaKnown RBP8.19□□□□□ -1.1
CD59-211ENST00000528987 POLA2Q14181 598 aa8.19□□□□□ -1.1
CD59-211ENST00000528987 STK24Q9Y6E0 443 aa8.18□□□□□ -1.1
CD59-211ENST00000528987 CADPS2Q86UW7 1296 aa8.17□□□□□ -1.1
CD59-211ENST00000528987 MYO15BQ96JP2 1530 aa8.17□□□□□ -1.1
CD59-211ENST00000528987 BRD2P25440 801 aaKnown RBP8.16□□□□□ -1.1
CD59-211ENST00000528987 RETREG2Q8NC44 543 aa8.16□□□□□ -1.1
CD59-211ENST00000528987 UNC13AQ9UPW8 1703 aa8.16□□□□□ -1.1
CD59-211ENST00000528987 ZNF316A6NFI3 1004 aaPredicted RBP8.15□□□□□ -1.1
CD59-211ENST00000528987 U3KPZ7 1027 aaPredicted RBP8.14□□□□□ -1.11
CD59-211ENST00000528987 CCDC97Q96F63 343 aaPredicted RBP8.14□□□□□ -1.11
CD59-211ENST00000528987 BCL11BQ9C0K0 894 aaPredicted RBP8.14□□□□□ -1.11
CD59-211ENST00000528987 FAM177A1Q8N128 213 aaPredicted RBP8.13□□□□□ -1.11
CD59-211ENST00000528987 FAM117AQ9C073 453 aa8.13□□□□□ -1.11
CD59-211ENST00000528987 ATP1B4Q9UN42 357 aaPredicted RBP8.13□□□□□ -1.11
CD59-211ENST00000528987 DCAF1Q9Y4B6 1507 aa8.12□□□□□ -1.11
CD59-211ENST00000528987 BICRAQ9NZM4 1560 aa8.12□□□□□ -1.11
CD59-211ENST00000528987 ZMYND10O75800 440 aa8.11□□□□□ -1.11
CD59-211ENST00000528987 UBE2Q2Q8WVN8 375 aa8.11□□□□□ -1.11
CD59-211ENST00000528987 CWC22Q9HCG8 908 aaKnown RBP8.1□□□□□ -1.11
CD59-211ENST00000528987 ARID4BQ4LE39 1312 aaPredicted RBP8.1□□□□□ -1.11
CD59-211ENST00000528987 DMRT2Q9Y5R5 561 aa8.09□□□□□ -1.11
CD59-211ENST00000528987 TRAK2O60296 914 aa8.08□□□□□ -1.12
CD59-211ENST00000528987 ZNF526Q8TF50 670 aaPredicted RBP8.08□□□□□ -1.12
CD59-211ENST00000528987 RIOK3O14730 519 aaKnown RBP8.07□□□□□ -1.12
CD59-211ENST00000528987 IRF5Q13568 498 aa8.07□□□□□ -1.12
CD59-211ENST00000528987 AK7Q96M32 723 aa8.07□□□□□ -1.12
CD59-211ENST00000528987 PDE4CQ08493 712 aa8.06□□□□□ -1.12
CD59-211ENST00000528987 TRAIPQ9BWF2 469 aa8.06□□□□□ -1.12
CD59-211ENST00000528987 PDE4DQ08499 809 aa8.05□□□□□ -1.12
CD59-211ENST00000528987 DCAF8Q5TAQ9 597 aa8.04□□□□□ -1.12
CD59-211ENST00000528987 IRX6P78412 446 aaPredicted RBP8.04□□□□□ -1.12
CD59-211ENST00000528987 FLIIQ13045 1269 aa8.03□□□□□ -1.12
CD59-211ENST00000528987 RBM26Q5T8P6 1007 aaKnown RBP8.03□□□□□ -1.12
CD59-211ENST00000528987 BARGINQ6ZT62 677 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms