RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 LOC105371045A0A1W2PR82 267 aa11.71□□□□□ -0.53
FDFT1-213ENST00000528729 ARID3AQ99856 593 aa11.7□□□□□ -0.54
FDFT1-213ENST00000528729 PDIA4P13667 645 aaKnown RBP11.69□□□□□ -0.54
FDFT1-213ENST00000528729 EIF5BO60841 1220 aaKnown RBP11.66□□□□□ -0.54
FDFT1-213ENST00000528729 GTPBP6O43824 516 aaPredicted RBP11.65□□□□□ -0.54
FDFT1-213ENST00000528729 C1orf115Q9H7X2 142 aa11.63□□□□□ -0.55
FDFT1-213ENST00000528729 NKX1-1Q15270 411 aaPredicted RBP11.62□□□□□ -0.55
FDFT1-213ENST00000528729 SHROOM4Q9ULL8 1493 aa11.61□□□□□ -0.55
FDFT1-213ENST00000528729 ZC3H15Q8WU90 426 aaKnown RBP11.59□□□□□ -0.55
FDFT1-213ENST00000528729 TRIM41Q8WV44 630 aa11.59□□□□□ -0.55
FDFT1-213ENST00000528729 NECTIN2Q92692 538 aa11.59□□□□□ -0.55
FDFT1-213ENST00000528729 SLC24A3Q9HC58 644 aa11.58□□□□□ -0.56
FDFT1-213ENST00000528729 MSH5O43196 834 aa11.56□□□□□ -0.56
FDFT1-213ENST00000528729 CIZ1Q9ULV3 898 aaPredicted RBP11.56□□□□□ -0.56
FDFT1-213ENST00000528729 HMGB1P09429 215 aaKnown RBP11.52□□□□□ -0.57
FDFT1-213ENST00000528729 PLCD3Q8N3E9 789 aa11.51□□□□□ -0.57
FDFT1-213ENST00000528729 KCNV2Q8TDN2 545 aa11.5□□□□□ -0.57
FDFT1-213ENST00000528729 STAG3Q9UJ98 1225 aa11.5□□□□□ -0.57
FDFT1-213ENST00000528729 IGSF3O75054 1194 aa11.48□□□□□ -0.57
FDFT1-213ENST00000528729 U3KPZ7 1027 aaPredicted RBP11.47□□□□□ -0.57
FDFT1-213ENST00000528729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.46□□□□□ -0.578e-12■■■■■ 27.4
FDFT1-213ENST00000528729 APBB1O00213 710 aa11.45□□□□□ -0.58
FDFT1-213ENST00000528729 KCTD17Q8N5Z5 321 aa11.45□□□□□ -0.58
FDFT1-213ENST00000528729 RNF25Q96BH1 459 aaPredicted RBP11.43□□□□□ -0.58
FDFT1-213ENST00000528729 ARID3CA6NKF2 412 aa11.42□□□□□ -0.58
FDFT1-213ENST00000528729 CDK11BP21127 795 aaKnown RBP11.42□□□□□ -0.58
FDFT1-213ENST00000528729 CDK11AQ9UQ88 783 aaPredicted RBP11.42□□□□□ -0.58
FDFT1-213ENST00000528729 RYDENQ9NUL5 291 aaKnown RBP11.41□□□□□ -0.58
FDFT1-213ENST00000528729 HSP90B1P14625 803 aaKnown RBP11.4□□□□□ -0.58
FDFT1-213ENST00000528729 RAD21O60216 631 aa11.38□□□□□ -0.59
FDFT1-213ENST00000528729 WDR70Q9NW82 654 aa11.38□□□□□ -0.59
FDFT1-213ENST00000528729 ZMYND10O75800 440 aa11.37□□□□□ -0.59
FDFT1-213ENST00000528729 RGS22Q8NE09 1264 aa11.37□□□□□ -0.59
FDFT1-213ENST00000528729 TRAIPQ9BWF2 469 aa11.35□□□□□ -0.59
FDFT1-213ENST00000528729 MIER1Q8N108 512 aa11.34□□□□□ -0.59
FDFT1-213ENST00000528729 IL27Q8NEV9 243 aa11.32□□□□□ -0.6
FDFT1-213ENST00000528729 MKRN3Q13064 507 aaKnown RBP11.31□□□□□ -0.6
FDFT1-213ENST00000528729 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
FDFT1-213ENST00000528729 RIOK3O14730 519 aaKnown RBP11.3□□□□□ -0.6
FDFT1-213ENST00000528729 PUS7Q96PZ0 661 aaKnown RBP11.3□□□□□ -0.6
FDFT1-213ENST00000528729 STK25O00506 426 aa11.29□□□□□ -0.6
FDFT1-213ENST00000528729 CCDC82Q8N4S0 544 aa11.28□□□□□ -0.6
FDFT1-213ENST00000528729 GPBP1L1Q9HC44 474 aaPredicted RBP11.28□□□□□ -0.6
FDFT1-213ENST00000528729 ABCC9O60706 1549 aa11.27□□□□□ -0.61
FDFT1-213ENST00000528729 TESPA1A2RU30 521 aaPredicted RBP11.26□□□□□ -0.61
FDFT1-213ENST00000528729 ARHGEF1Q92888 912 aaKnown RBP11.26□□□□□ -0.61
FDFT1-213ENST00000528729 MTMR7Q9Y216 660 aa11.26□□□□□ -0.61
FDFT1-213ENST00000528729 FLIIQ13045 1269 aa11.25□□□□□ -0.61
FDFT1-213ENST00000528729 BARGINQ6ZT62 677 aa11.25□□□□□ -0.61
FDFT1-213ENST00000528729 TMCO4Q5TGY1 634 aa11.24□□□□□ -0.61
FDFT1-213ENST00000528729 AK7Q96M32 723 aa11.23□□□□□ -0.61
FDFT1-213ENST00000528729 KDM4CQ9H3R0 1056 aa11.22□□□□□ -0.61
FDFT1-213ENST00000528729 VGFO15240 615 aaPredicted RBP11.21□□□□□ -0.61
FDFT1-213ENST00000528729 POLA2Q14181 598 aa11.21□□□□□ -0.61
FDFT1-213ENST00000528729 GSE1Q14687 1217 aa11.21□□□□□ -0.61
FDFT1-213ENST00000528729 RBM25P49756 843 aaKnown RBP11.19□□□□□ -0.62
FDFT1-213ENST00000528729 A6NJR5 290 aa11.18□□□□□ -0.62
FDFT1-213ENST00000528729 PLEKHG5O94827 1062 aa11.18□□□□□ -0.62
FDFT1-213ENST00000528729 MFAP1P55081 439 aaKnown RBP11.18□□□□□ -0.62
FDFT1-213ENST00000528729 CADPS2Q86UW7 1296 aa11.18□□□□□ -0.62
FDFT1-213ENST00000528729 AEBP1Q8IUX7 1158 aa11.18□□□□□ -0.62
FDFT1-213ENST00000528729 SEMA3EO15041 775 aa11.17□□□□□ -0.62
FDFT1-213ENST00000528729 TRAK2O60296 914 aa11.15□□□□□ -0.62
FDFT1-213ENST00000528729 CCDC180Q9P1Z9 1646 aa11.15□□□□□ -0.62
FDFT1-213ENST00000528729 SGIP1Q9BQI5 828 aa11.14□□□□□ -0.63
FDFT1-213ENST00000528729 FOXD4L5Q5VV16 416 aaPredicted RBP11.13□□□□□ -0.63
FDFT1-213ENST00000528729 SMYD5Q6GMV2 418 aa11.13□□□□□ -0.63
FDFT1-213ENST00000528729 FOXD4L4Q8WXT5 416 aaPredicted RBP11.13□□□□□ -0.63
FDFT1-213ENST00000528729 CHMP4AQ9BY43 222 aa11.13□□□□□ -0.63
FDFT1-213ENST00000528729 E9PSI1 815 aa11.11□□□□□ -0.63
FDFT1-213ENST00000528729 ZNF428Q96B54 188 aa11.11□□□□□ -0.63
FDFT1-213ENST00000528729 STK24Q9Y6E0 443 aa11.11□□□□□ -0.63
FDFT1-213ENST00000528729 BCL11BQ9C0K0 894 aaPredicted RBP11.09□□□□□ -0.63
FDFT1-213ENST00000528729 GZF1Q9H116 711 aaPredicted RBP11.09□□□□□ -0.63
FDFT1-213ENST00000528729 ONECUT3O60422 494 aaPredicted RBP11.07□□□□□ -0.64
FDFT1-213ENST00000528729 DCAF8L1A6NGE4 600 aa11.06□□□□□ -0.64
FDFT1-213ENST00000528729 PDE4DQ08499 809 aa11.06□□□□□ -0.64
FDFT1-213ENST00000528729 E2F4Q16254 413 aa11.05□□□□□ -0.64
FDFT1-213ENST00000528729 ZNF316A6NFI3 1004 aaPredicted RBP11.03□□□□□ -0.64
FDFT1-213ENST00000528729 TRIM66O15016 1216 aa11.03□□□□□ -0.64
FDFT1-213ENST00000528729 CLUAP1Q96AJ1 413 aa11.03□□□□□ -0.64
FDFT1-213ENST00000528729 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.02□□□□□ -0.65
FDFT1-213ENST00000528729 KRI1Q8N9T8 703 aaKnown RBP11.02□□□□□ -0.65
FDFT1-213ENST00000528729 ZFP91Q96JP5 570 aaPredicted RBP11.02□□□□□ -0.65
FDFT1-213ENST00000528729 SERPINA10Q9UK55 444 aa11.02□□□□□ -0.65
FDFT1-213ENST00000528729 ZBTB12Q9Y330 459 aaPredicted RBP11□□□□□ -0.65
FDFT1-213ENST00000528729 CCDC97Q96F63 343 aaPredicted RBP10.99□□□□□ -0.65
FDFT1-213ENST00000528729 FAM117AQ9C073 453 aa10.99□□□□□ -0.65
FDFT1-213ENST00000528729 RETREG2Q8NC44 543 aa10.98□□□□□ -0.65
FDFT1-213ENST00000528729 ZNF692Q9BU19 519 aaPredicted RBP10.98□□□□□ -0.65
FDFT1-213ENST00000528729 RSPH4AQ5TD94 716 aa10.96□□□□□ -0.65
FDFT1-213ENST00000528729 FBXW7Q969H0 707 aa10.96□□□□□ -0.65
FDFT1-213ENST00000528729 DDRGK1Q96HY6 314 aa10.96□□□□□ -0.65
FDFT1-213ENST00000528729 USP35Q9P2H5 1018 aa10.96□□□□□ -0.65
FDFT1-213ENST00000528729 PLEKHG3A1L390 1219 aa10.94□□□□□ -0.66
FDFT1-213ENST00000528729 NUBP1P53384 320 aa10.94□□□□□ -0.66
FDFT1-213ENST00000528729 DCAF8Q5TAQ9 597 aa10.94□□□□□ -0.66
FDFT1-213ENST00000528729 CHRM1P11229 460 aaPredicted RBP10.93□□□□□ -0.66
FDFT1-213ENST00000528729 IRF5Q13568 498 aa10.93□□□□□ -0.66
FDFT1-213ENST00000528729 GPIHBP1Q8IV16 184 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms