RNA–Protein interactions for RNA: ENST00000525528.1

BDNF-212, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 BASIC

Gene BDNF, Length 4,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-212ENST00000525528 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.42□□□□□ -0.9
BDNF-212ENST00000525528 MYH16Q9H6N6 1097 aa9.41□□□□□ -0.9
BDNF-212ENST00000525528 KDM2AQ9Y2K7 1162 aa9.41□□□□□ -0.9
BDNF-212ENST00000525528 GLIPR1L2Q4G1C9 344 aa9.39□□□□□ -0.91
BDNF-212ENST00000525528 ANP32BQ92688 251 aaKnown RBP9.39□□□□□ -0.91
BDNF-212ENST00000525528 SENP3Q9H4L4 574 aaPredicted RBP9.39□□□□□ -0.91
BDNF-212ENST00000525528 EIF5BO60841 1220 aaKnown RBP9.39□□□□□ -0.91
BDNF-212ENST00000525528 TMC1Q8TDI8 760 aa9.38□□□□□ -0.91
BDNF-212ENST00000525528 EIF4G2P78344 907 aaKnown RBP eCLIP9.38□□□□□ -0.91
BDNF-212ENST00000525528 POGKQ9P215 609 aa9.37□□□□□ -0.91
BDNF-212ENST00000525528 CDCA8Q53HL2 280 aa9.37□□□□□ -0.91
BDNF-212ENST00000525528 CFAP53Q96M91 514 aa9.36□□□□□ -0.91
BDNF-212ENST00000525528 MLECQ14165 292 aa9.35□□□□□ -0.91
BDNF-212ENST00000525528 CFDP1Q9UEE9 299 aaPredicted RBP9.34□□□□□ -0.91
BDNF-212ENST00000525528 RSF1Q96T23 1441 aaPredicted RBP9.32□□□□□ -0.92
BDNF-212ENST00000525528 PPM1GO15355 546 aaPredicted RBP9.31□□□□□ -0.92
BDNF-212ENST00000525528 TMX4Q9H1E5 349 aaPredicted RBP9.31□□□□□ -0.92
BDNF-212ENST00000525528 GOLGA2Q08379 1002 aa9.31□□□□□ -0.92
BDNF-212ENST00000525528 ANP32AP39687 249 aaKnown RBP9.3□□□□□ -0.92
BDNF-212ENST00000525528 RGL3Q3MIN7 710 aa9.3□□□□□ -0.92
BDNF-212ENST00000525528 SALL2Q9Y467 1007 aaPredicted RBP9.29□□□□□ -0.92
BDNF-212ENST00000525528 RB1CC1Q8TDY2 1594 aa9.29□□□□□ -0.92
BDNF-212ENST00000525528 NUDCQ9Y266 331 aa9.29□□□□□ -0.92
BDNF-212ENST00000525528 CCDC9Q9Y3X0 531 aaKnown RBP9.28□□□□□ -0.92
BDNF-212ENST00000525528 DCAF8L1A6NGE4 600 aa9.27□□□□□ -0.93
BDNF-212ENST00000525528 KANK1Q14678 1352 aa9.26□□□□□ -0.93
BDNF-212ENST00000525528 FAM9BQ8IZU0 186 aa9.26□□□□□ -0.93
BDNF-212ENST00000525528 MAPK8IP3Q9UPT6 1336 aa9.24□□□□□ -0.93
BDNF-212ENST00000525528 RRP7BPQ9NSQ0 103 aa9.24□□□□□ -0.93
BDNF-212ENST00000525528 KNSTRNQ9Y448 316 aa9.24□□□□□ -0.93
BDNF-212ENST00000525528 HNRNPUQ00839 825 aaKnown RBP eCLIP9.23□□□□□ -0.93
BDNF-212ENST00000525528 TULP1O00294 542 aaPredicted RBP9.22□□□□□ -0.93
BDNF-212ENST00000525528 CSB-PGBD3P0DP91 1061 aa9.22□□□□□ -0.93
BDNF-212ENST00000525528 ZRSR1Q15695 479 aaKnown RBP9.21□□□□□ -0.93
BDNF-212ENST00000525528 PNNQ9H307 717 aaKnown RBP9.21□□□□□ -0.93
BDNF-212ENST00000525528 GGT6Q6P531 493 aa9.21□□□□□ -0.94
BDNF-212ENST00000525528 EID1Q9Y6B2 187 aa9.2□□□□□ -0.94
BDNF-212ENST00000525528 MRS2Q9HD23 443 aa9.2□□□□□ -0.94
BDNF-212ENST00000525528 CHMP4BQ9H444 224 aaKnown RBP9.19□□□□□ -0.94
BDNF-212ENST00000525528 BAZ1BQ9UIG0 1483 aaKnown RBP9.19□□□□□ -0.94
BDNF-212ENST00000525528 NCLP19338 710 aaKnown RBP9.19□□□□□ -0.94
BDNF-212ENST00000525528 DDX10Q13206 875 aaKnown RBP9.17□□□□□ -0.94
BDNF-212ENST00000525528 OS9Q13438 667 aaPredicted RBP9.17□□□□□ -0.94
BDNF-212ENST00000525528 CHMP4AQ9BY43 222 aa9.17□□□□□ -0.94
BDNF-212ENST00000525528 ISY1Q9ULR0 285 aaKnown RBP9.17□□□□□ -0.94
BDNF-212ENST00000525528 KIF27Q86VH2 1401 aa9.17□□□□□ -0.94
BDNF-212ENST00000525528 CASC1Q6TDU7 716 aa9.17□□□□□ -0.94
BDNF-212ENST00000525528 SRPK2P78362 688 aaKnown RBP9.16□□□□□ -0.94
BDNF-212ENST00000525528 PAK3O75914 559 aaPredicted RBP9.16□□□□□ -0.94
BDNF-212ENST00000525528 CARMIL2Q6F5E8 1435 aa9.15□□□□□ -0.94
BDNF-212ENST00000525528 SOX12O15370 315 aa9.15□□□□□ -0.94
BDNF-212ENST00000525528 FGD1P98174 961 aa9.15□□□□□ -0.94
BDNF-212ENST00000525528 CCDC136Q96JN2 1154 aa9.15□□□□□ -0.94
BDNF-212ENST00000525528 EFCAB2Q5VUJ9 269 aa9.15□□□□□ -0.94
BDNF-212ENST00000525528 LAS1LQ9Y4W2 734 aaKnown RBP9.15□□□□□ -0.94
BDNF-212ENST00000525528 G3V3G9 751 aa9.15□□□□□ -0.95
BDNF-212ENST00000525528 DCAF8Q5TAQ9 597 aa9.15□□□□□ -0.95
BDNF-212ENST00000525528 CARD11Q9BXL7 1154 aa9.14□□□□□ -0.95
BDNF-212ENST00000525528 CCNB3Q8WWL7 1395 aa9.14□□□□□ -0.95
BDNF-212ENST00000525528 FTSJ3Q8IY81 847 aaKnown RBP9.13□□□□□ -0.95
BDNF-212ENST00000525528 CLIP1P30622 1438 aa9.13□□□□□ -0.95
BDNF-212ENST00000525528 RTF1Q92541 710 aaKnown RBP9.13□□□□□ -0.95
BDNF-212ENST00000525528 PHF23Q9BUL5 403 aaPredicted RBP9.13□□□□□ -0.95
BDNF-212ENST00000525528 U2SURPO15042 1029 aaKnown RBP9.12□□□□□ -0.95
BDNF-212ENST00000525528 PDS5BQ9NTI5 1447 aa9.12□□□□□ -0.95
BDNF-212ENST00000525528 MS4A1P11836 297 aa9.11□□□□□ -0.95
BDNF-212ENST00000525528 FOXD1Q16676 465 aa9.11□□□□□ -0.95
BDNF-212ENST00000525528 HDGFL2Q7Z4V5 671 aaPredicted RBP9.11□□□□□ -0.95
BDNF-212ENST00000525528 KCNJ4P48050 445 aa9.11□□□□□ -0.95
BDNF-212ENST00000525528 ZNF330Q9Y3S2 320 aaPredicted RBP9.11□□□□□ -0.95
BDNF-212ENST00000525528 MIER1Q8N108 512 aa9.11□□□□□ -0.95
BDNF-212ENST00000525528 EEA1Q15075 1411 aa9.1□□□□□ -0.95
BDNF-212ENST00000525528 CLSTN1O94985 981 aa9.1□□□□□ -0.95
BDNF-212ENST00000525528 GTF2E1P29083 439 aaPredicted RBP9.1□□□□□ -0.95
BDNF-212ENST00000525528 NEUROD2Q15784 382 aa9.1□□□□□ -0.95
BDNF-212ENST00000525528 GOLGA6L22H0YM25 854 aa9.09□□□□□ -0.95
BDNF-212ENST00000525528 NCBP3Q53F19 620 aaKnown RBP9.09□□□□□ -0.95
BDNF-212ENST00000525528 MEX3CQ5U5Q3 659 aaKnown RBP9.09□□□□□ -0.95
BDNF-212ENST00000525528 NBR1Q14596 966 aa9.09□□□□□ -0.95
BDNF-212ENST00000525528 CYB5RLQ6IPT4 315 aa9.08□□□□□ -0.96
BDNF-212ENST00000525528 WRNQ14191 1432 aaPredicted RBP eCLIP9.08□□□□□ -0.96
BDNF-212ENST00000525528 FKBP8Q14318 412 aa9.08□□□□□ -0.96
BDNF-212ENST00000525528 OSCARQ8IYS5 282 aa9.08□□□□□ -0.96
BDNF-212ENST00000525528 NACADO15069 1562 aa9.07□□□□□ -0.96
BDNF-212ENST00000525528 STK26Q9P289 416 aa9.07□□□□□ -0.96
BDNF-212ENST00000525528 TNNT2P45379 298 aaPredicted RBP9.07□□□□□ -0.96
BDNF-212ENST00000525528 SAFB2Q14151 953 aaKnown RBP eCLIP9.07□□□□□ -0.96
BDNF-212ENST00000525528 TMF1P82094 1093 aa9.07□□□□□ -0.96
BDNF-212ENST00000525528 HDAC5Q9UQL6 1122 aa9.07□□□□□ -0.96
BDNF-212ENST00000525528 CEP162Q5TB80 1403 aa9.06□□□□□ -0.96
BDNF-212ENST00000525528 NGDNQ8NEJ9 315 aaKnown RBP9.06□□□□□ -0.96
BDNF-212ENST00000525528 MSH5O43196 834 aa9.06□□□□□ -0.96
BDNF-212ENST00000525528 DEKP35659 375 aaKnown RBP9.06□□□□□ -0.96
BDNF-212ENST00000525528 BECN1Q14457 450 aa9.05□□□□□ -0.96
BDNF-212ENST00000525528 NAP1L2Q9ULW6 460 aaPredicted RBP9.05□□□□□ -0.96
BDNF-212ENST00000525528 ERICH6BQ5W0A0 696 aa9.05□□□□□ -0.96
BDNF-212ENST00000525528 TAOK2Q9UL54 1235 aa9.04□□□□□ -0.96
BDNF-212ENST00000525528 RTN4Q9NQC3 1192 aaKnown RBP9.03□□□□□ -0.96
BDNF-212ENST00000525528 TAF7LQ5H9L4 462 aa9.03□□□□□ -0.96
BDNF-212ENST00000525528 EVA1CP58658 441 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms