RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 CCDC61Q9Y6R9 512 aa16.63■□□□□ 0.25
COPB1-203ENST00000525214 FAM212AQ96EL1 285 aa16.54■□□□□ 0.24
COPB1-203ENST00000525214 CLCN6P51797 869 aa16.53■□□□□ 0.24
COPB1-203ENST00000525214 SPOCK2Q92563 424 aa16.53■□□□□ 0.24
COPB1-203ENST00000525214 GALR2O43603 387 aaPredicted RBP16.5■□□□□ 0.23
COPB1-203ENST00000525214 DCAF8Q5TAQ9 597 aa16.47■□□□□ 0.23
COPB1-203ENST00000525214 KIF12Q96FN5 646 aa16.47■□□□□ 0.23
COPB1-203ENST00000525214 MS4A3Q96HJ5 214 aa16.44■□□□□ 0.22
COPB1-203ENST00000525214 MAP3K13O43283 966 aa16.41■□□□□ 0.22
COPB1-203ENST00000525214 GSE1Q14687 1217 aa16.38■□□□□ 0.21
COPB1-203ENST00000525214 POTEIP0CG38 1075 aa16.37■□□□□ 0.21
COPB1-203ENST00000525214 PYGBP11216 843 aa16.34■□□□□ 0.21
COPB1-203ENST00000525214 CIZ1Q9ULV3 898 aaPredicted RBP16.31■□□□□ 0.2
COPB1-203ENST00000525214 SGIP1Q9BQI5 828 aa16.29■□□□□ 0.2
COPB1-203ENST00000525214 PCDHB13Q9Y5F0 798 aa16.29■□□□□ 0.2
COPB1-203ENST00000525214 DCBLD2Q96PD2 775 aa16.28■□□□□ 0.2
COPB1-203ENST00000525214 TRPC6Q9Y210 931 aa16.28■□□□□ 0.2
COPB1-203ENST00000525214 IFNL1Q8IU54 200 aa16.26■□□□□ 0.19
COPB1-203ENST00000525214 CHRM1P11229 460 aaPredicted RBP16.23■□□□□ 0.19
COPB1-203ENST00000525214 ATMINO43313 823 aaPredicted RBP16.17■□□□□ 0.18
COPB1-203ENST00000525214 ASTLQ6HA08 431 aaPredicted RBP16.17■□□□□ 0.18
COPB1-203ENST00000525214 PCDHB8Q9UN66 801 aa16.17■□□□□ 0.18
COPB1-203ENST00000525214 BMP2KQ9NSY1 1161 aaPredicted RBP16.16■□□□□ 0.18
COPB1-203ENST00000525214 TIE1P35590 1138 aa16.15■□□□□ 0.18
COPB1-203ENST00000525214 PELP1Q8IZL8 1130 aaKnown RBP16.15■□□□□ 0.18
COPB1-203ENST00000525214 ATN1P54259 1190 aaPredicted RBP16.11■□□□□ 0.17
COPB1-203ENST00000525214 TRIM41Q8WV44 630 aa16.11■□□□□ 0.17
COPB1-203ENST00000525214 TTLL13PA6NNM8 815 aa16.1■□□□□ 0.17
COPB1-203ENST00000525214 ZNF467Q7Z7K2 595 aaPredicted RBP16.09■□□□□ 0.17
COPB1-203ENST00000525214 PKD2Q13563 968 aa16.06■□□□□ 0.16
COPB1-203ENST00000525214 TMEM106CQ9BVX2 250 aa16.03■□□□□ 0.16
COPB1-203ENST00000525214 RNF25Q96BH1 459 aaPredicted RBP16.02■□□□□ 0.16
COPB1-203ENST00000525214 TRIM35Q9UPQ4 493 aa15.98■□□□□ 0.15
COPB1-203ENST00000525214 PSEN1P49768 467 aa15.95■□□□□ 0.14
COPB1-203ENST00000525214 SLC39A7Q92504 469 aa15.95■□□□□ 0.14
COPB1-203ENST00000525214 ECM2O94769 699 aaPredicted RBP15.94■□□□□ 0.14
COPB1-203ENST00000525214 PDAP1Q13442 181 aaKnown RBP15.94■□□□□ 0.14
COPB1-203ENST00000525214 METRNQ9UJH8 293 aa15.94■□□□□ 0.14
COPB1-203ENST00000525214 C7P10643 843 aa15.92■□□□□ 0.14
COPB1-203ENST00000525214 RIOK3O14730 519 aaKnown RBP15.91■□□□□ 0.14
COPB1-203ENST00000525214 POTEFA5A3E0 1075 aa15.88■□□□□ 0.13
COPB1-203ENST00000525214 LHX8Q68G74 356 aa15.87■□□□□ 0.13
COPB1-203ENST00000525214 POTEB2H3BUK9 544 aa15.86■□□□□ 0.13
COPB1-203ENST00000525214 RGL2O15211 777 aa15.86■□□□□ 0.13
COPB1-203ENST00000525214 IER5LQ5T953 404 aa15.84■□□□□ 0.13
COPB1-203ENST00000525214 COLQQ9Y215 455 aaPredicted RBP15.82■□□□□ 0.12
COPB1-203ENST00000525214 VGFO15240 615 aaPredicted RBP15.81■□□□□ 0.12
COPB1-203ENST00000525214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.79■□□□□ 0.12
COPB1-203ENST00000525214 ZFP91Q96JP5 570 aaPredicted RBP15.79■□□□□ 0.12
COPB1-203ENST00000525214 IRX5P78411 483 aaPredicted RBP15.76■□□□□ 0.11
COPB1-203ENST00000525214 CABP2Q9NPB3 220 aa15.76■□□□□ 0.11
COPB1-203ENST00000525214 SEC24BO95487 1268 aa15.74■□□□□ 0.11
COPB1-203ENST00000525214 POTEJP0CG39 1038 aa15.74■□□□□ 0.11
COPB1-203ENST00000525214 GOLGA2Q08379 1002 aa15.72■□□□□ 0.11
COPB1-203ENST00000525214 MKRN3Q13064 507 aaKnown RBP15.7■□□□□ 0.1
COPB1-203ENST00000525214 TAOK2Q9UL54 1235 aa15.68■□□□□ 0.1
COPB1-203ENST00000525214 PLCG2P16885 1265 aa15.67■□□□□ 0.1
COPB1-203ENST00000525214 OCEL1Q9H607 264 aa15.67■□□□□ 0.1
COPB1-203ENST00000525214 EFCAB3Q8N7B9 438 aa15.66■□□□□ 0.1
COPB1-203ENST00000525214 PDCD7Q8N8D1 485 aaKnown RBP15.65■□□□□ 0.1
COPB1-203ENST00000525214 BCL11BQ9C0K0 894 aaPredicted RBP15.65■□□□□ 0.1
COPB1-203ENST00000525214 ILDR1Q86SU0 546 aaPredicted RBP15.64■□□□□ 0.09
COPB1-203ENST00000525214 OTUD5Q96G74 571 aa15.63■□□□□ 0.09
COPB1-203ENST00000525214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.62■□□□□ 0.091e-6■□□□□ 10.8
COPB1-203ENST00000525214 STK25O00506 426 aa15.61■□□□□ 0.09
COPB1-203ENST00000525214 STK24Q9Y6E0 443 aa15.6■□□□□ 0.09
COPB1-203ENST00000525214 RTN4Q9NQC3 1192 aaKnown RBP15.55■□□□□ 0.08
COPB1-203ENST00000525214 AMER1Q5JTC6 1135 aaPredicted RBP15.53■□□□□ 0.08
COPB1-203ENST00000525214 DPY19L2Q6NUT2 758 aa15.53■□□□□ 0.08
COPB1-203ENST00000525214 SOX12O15370 315 aa15.52■□□□□ 0.08
COPB1-203ENST00000525214 MAMSTRQ6ZN01 415 aa15.51■□□□□ 0.07
COPB1-203ENST00000525214 HS6ST3Q8IZP7 471 aa15.5■□□□□ 0.07
COPB1-203ENST00000525214 PHF8Q9UPP1 1060 aa15.5■□□□□ 0.07
COPB1-203ENST00000525214 MS4A4AQ96JQ5 239 aa15.48■□□□□ 0.07
COPB1-203ENST00000525214 SCUBE2Q9NQ36 999 aa15.47■□□□□ 0.07
COPB1-203ENST00000525214 CHGAP10645 457 aaKnown RBP15.46■□□□□ 0.07
COPB1-203ENST00000525214 MFRPQ9BY79 579 aa15.46■□□□□ 0.07
COPB1-203ENST00000525214 FBXO22Q8NEZ5 403 aa15.44■□□□□ 0.06
COPB1-203ENST00000525214 L3MBTL3Q96JM7 780 aaPredicted RBP15.42■□□□□ 0.06
COPB1-203ENST00000525214 NLRP6P59044 892 aa15.4■□□□□ 0.06
COPB1-203ENST00000525214 BOLA1Q9Y3E2 137 aa15.37■□□□□ 0.05
COPB1-203ENST00000525214 DCAF8L2P0C7V8 631 aa15.36■□□□□ 0.05
COPB1-203ENST00000525214 DNAJC5Q9H3Z4 198 aa15.35■□□□□ 0.05
COPB1-203ENST00000525214 NKX1-1Q15270 411 aaPredicted RBP15.33■□□□□ 0.04
COPB1-203ENST00000525214 TMEM121BQ9BXQ6 578 aaPredicted RBP15.33■□□□□ 0.04
COPB1-203ENST00000525214 SLAIN1Q8ND83 568 aa15.32■□□□□ 0.04
COPB1-203ENST00000525214 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.31■□□□□ 0.04
COPB1-203ENST00000525214 C3orf67Q6ZVT6 689 aa15.3■□□□□ 0.04
COPB1-203ENST00000525214 MICALL2Q8IY33 904 aa15.29■□□□□ 0.04
COPB1-203ENST00000525214 G3V3G9 751 aa15.27■□□□□ 0.04
COPB1-203ENST00000525214 PPP1R37O75864 691 aa15.23■□□□□ 0.03
COPB1-203ENST00000525214 TMEM92Q6UXU6 159 aa15.18■□□□□ 0.02
COPB1-203ENST00000525214 LCE2DQ5TA82 110 aaPredicted RBP15.14■□□□□ 0.01
COPB1-203ENST00000525214 GTPBP6O43824 516 aaPredicted RBP15.13■□□□□ 0.01
COPB1-203ENST00000525214 RYDENQ9NUL5 291 aaKnown RBP15.08■□□□□ 0
COPB1-203ENST00000525214 FAM163AQ96GL9 167 aaPredicted RBP15.07■□□□□ 0
COPB1-203ENST00000525214 BBXQ8WY36 941 aaPredicted RBP15.06■□□□□ 0
COPB1-203ENST00000525214 KIF3CO14782 793 aa15.01□□□□□ -0.01
COPB1-203ENST00000525214 SNPHO15079 494 aa15□□□□□ -0.01
COPB1-203ENST00000525214 ST18O60284 1047 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms