RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 CCDC61Q9Y6R9 512 aa16.98■□□□□ 0.31
SGCE-211ENST00000522045 VASPP50552 380 aaPredicted RBP16.9■□□□□ 0.3
SGCE-211ENST00000522045 NUBP1P53384 320 aa16.9■□□□□ 0.3
SGCE-211ENST00000522045 MS4A3Q96HJ5 214 aa16.9■□□□□ 0.3
SGCE-211ENST00000522045 KIF12Q96FN5 646 aa16.85■□□□□ 0.29
SGCE-211ENST00000522045 FAM212AQ96EL1 285 aa16.84■□□□□ 0.29
SGCE-211ENST00000522045 LHX8Q68G74 356 aa16.81■□□□□ 0.28
SGCE-211ENST00000522045 MAP3K13O43283 966 aa16.77■□□□□ 0.28
SGCE-211ENST00000522045 KLHL34Q8N239 644 aa16.77■□□□□ 0.28
SGCE-211ENST00000522045 ASTLQ6HA08 431 aaPredicted RBP16.72■□□□□ 0.27
SGCE-211ENST00000522045 ATMINO43313 823 aaPredicted RBP16.69■□□□□ 0.26
SGCE-211ENST00000522045 DCAF8Q5TAQ9 597 aa16.69■□□□□ 0.26
SGCE-211ENST00000522045 SGIP1Q9BQI5 828 aa16.68■□□□□ 0.26
SGCE-211ENST00000522045 PCDHB13Q9Y5F0 798 aa16.66■□□□□ 0.26
SGCE-211ENST00000522045 PELP1Q8IZL8 1130 aaKnown RBP16.65■□□□□ 0.26
SGCE-211ENST00000522045 TIE1P35590 1138 aa16.62■□□□□ 0.25
SGCE-211ENST00000522045 TRPC6Q9Y210 931 aa16.62■□□□□ 0.25
SGCE-211ENST00000522045 BMP2KQ9NSY1 1161 aaPredicted RBP16.61■□□□□ 0.25
SGCE-211ENST00000522045 SLC39A7Q92504 469 aa16.6■□□□□ 0.25
SGCE-211ENST00000522045 ATN1P54259 1190 aaPredicted RBP16.59■□□□□ 0.25
SGCE-211ENST00000522045 IFNLR1Q8IU57 520 aaPredicted RBP16.59■□□□□ 0.25
SGCE-211ENST00000522045 GSE1Q14687 1217 aa16.58■□□□□ 0.24
SGCE-211ENST00000522045 METRNQ9UJH8 293 aa16.57■□□□□ 0.24
SGCE-211ENST00000522045 C7P10643 843 aa16.56■□□□□ 0.24
SGCE-211ENST00000522045 PYGBP11216 843 aa16.56■□□□□ 0.24
SGCE-211ENST00000522045 IFNL1Q8IU54 200 aa16.56■□□□□ 0.24
SGCE-211ENST00000522045 SPOCK2Q92563 424 aa16.54■□□□□ 0.24
SGCE-211ENST00000522045 TTLL13PA6NNM8 815 aa16.52■□□□□ 0.24
SGCE-211ENST00000522045 POTEB2H3BUK9 544 aa16.45■□□□□ 0.22
SGCE-211ENST00000522045 TMEM106CQ9BVX2 250 aa16.42■□□□□ 0.22
SGCE-211ENST00000522045 TRIM35Q9UPQ4 493 aa16.42■□□□□ 0.22
SGCE-211ENST00000522045 CIZ1Q9ULV3 898 aaPredicted RBP16.4■□□□□ 0.22
SGCE-211ENST00000522045 PCDHB8Q9UN66 801 aa16.39■□□□□ 0.21
SGCE-211ENST00000522045 CHRM1P11229 460 aaPredicted RBP16.38■□□□□ 0.21
SGCE-211ENST00000522045 ZNF467Q7Z7K2 595 aaPredicted RBP16.38■□□□□ 0.21
SGCE-211ENST00000522045 IER5LQ5T953 404 aa16.36■□□□□ 0.21
SGCE-211ENST00000522045 OTUD5Q96G74 571 aa16.35■□□□□ 0.21
SGCE-211ENST00000522045 SEC24BO95487 1268 aa16.33■□□□□ 0.2
SGCE-211ENST00000522045 POTEFA5A3E0 1075 aa16.31■□□□□ 0.2
SGCE-211ENST00000522045 MAMSTRQ6ZN01 415 aa16.28■□□□□ 0.2
SGCE-211ENST00000522045 COLQQ9Y215 455 aaPredicted RBP16.27■□□□□ 0.2
SGCE-211ENST00000522045 POTEJP0CG39 1038 aa16.26■□□□□ 0.19
SGCE-211ENST00000522045 TRIM41Q8WV44 630 aa16.22■□□□□ 0.19
SGCE-211ENST00000522045 SCUBE2Q9NQ36 999 aa16.21■□□□□ 0.19
SGCE-211ENST00000522045 PLCG2P16885 1265 aa16.19■□□□□ 0.18
SGCE-211ENST00000522045 PSEN1P49768 467 aa16.19■□□□□ 0.18
SGCE-211ENST00000522045 PDAP1Q13442 181 aaKnown RBP16.17■□□□□ 0.18
SGCE-211ENST00000522045 IRX5P78411 483 aaPredicted RBP16.16■□□□□ 0.18
SGCE-211ENST00000522045 GOLGA2Q08379 1002 aa16.15■□□□□ 0.18
SGCE-211ENST00000522045 OCEL1Q9H607 264 aa16.11■□□□□ 0.17
SGCE-211ENST00000522045 MKRN3Q13064 507 aaKnown RBP16.09■□□□□ 0.17
SGCE-211ENST00000522045 CABP2Q9NPB3 220 aa16■□□□□ 0.15
SGCE-211ENST00000522045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.98■□□□□ 0.15
SGCE-211ENST00000522045 PDCD7Q8N8D1 485 aaKnown RBP15.97■□□□□ 0.15
SGCE-211ENST00000522045 RIOK3O14730 519 aaKnown RBP15.96■□□□□ 0.15
SGCE-211ENST00000522045 RNF25Q96BH1 459 aaPredicted RBP15.94■□□□□ 0.14
SGCE-211ENST00000522045 SLAIN1Q8ND83 568 aa15.91■□□□□ 0.14
SGCE-211ENST00000522045 VGFO15240 615 aaPredicted RBP15.89■□□□□ 0.13
SGCE-211ENST00000522045 L3MBTL3Q96JM7 780 aaPredicted RBP15.89■□□□□ 0.13
SGCE-211ENST00000522045 ILDR1Q86SU0 546 aaPredicted RBP15.88■□□□□ 0.13
SGCE-211ENST00000522045 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.86■□□□□ 0.13
SGCE-211ENST00000522045 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.84■□□□□ 0.13
SGCE-211ENST00000522045 ZFP91Q96JP5 570 aaPredicted RBP15.84■□□□□ 0.13
SGCE-211ENST00000522045 ECM2O94769 699 aaPredicted RBP15.83■□□□□ 0.12
SGCE-211ENST00000522045 FAM163AQ96GL9 167 aaPredicted RBP15.83■□□□□ 0.12
SGCE-211ENST00000522045 TAOK2Q9UL54 1235 aa15.83■□□□□ 0.12
SGCE-211ENST00000522045 C3orf67Q6ZVT6 689 aa15.82■□□□□ 0.12
SGCE-211ENST00000522045 EFCAB3Q8N7B9 438 aa15.82■□□□□ 0.12
SGCE-211ENST00000522045 POTEMA6NI47 508 aa15.81■□□□□ 0.12
SGCE-211ENST00000522045 POTEGQ6S5H5 508 aa15.78■□□□□ 0.12
SGCE-211ENST00000522045 PKD2Q13563 968 aa15.77■□□□□ 0.12
SGCE-211ENST00000522045 DPY19L2Q6NUT2 758 aa15.77■□□□□ 0.12
SGCE-211ENST00000522045 G3V3G9 751 aa15.76■□□□□ 0.11
SGCE-211ENST00000522045 LCE2DQ5TA82 110 aaPredicted RBP15.76■□□□□ 0.11
SGCE-211ENST00000522045 BOLA1Q9Y3E2 137 aa15.72■□□□□ 0.11
SGCE-211ENST00000522045 SOX12O15370 315 aa15.71■□□□□ 0.11
SGCE-211ENST00000522045 BCL11BQ9C0K0 894 aaPredicted RBP15.7■□□□□ 0.1
SGCE-211ENST00000522045 SNPHO15079 494 aa15.67■□□□□ 0.1
SGCE-211ENST00000522045 RGL2O15211 777 aa15.67■□□□□ 0.1
SGCE-211ENST00000522045 STK24Q9Y6E0 443 aa15.66■□□□□ 0.1
SGCE-211ENST00000522045 STK25O00506 426 aa15.65■□□□□ 0.1
SGCE-211ENST00000522045 ST18O60284 1047 aa15.62■□□□□ 0.09
SGCE-211ENST00000522045 PHF8Q9UPP1 1060 aa15.62■□□□□ 0.09
SGCE-211ENST00000522045 TMEM121BQ9BXQ6 578 aaPredicted RBP15.6■□□□□ 0.09
SGCE-211ENST00000522045 MS4A4AQ96JQ5 239 aa15.58■□□□□ 0.08
SGCE-211ENST00000522045 NLRP6P59044 892 aa15.57■□□□□ 0.08
SGCE-211ENST00000522045 PCDH10Q9P2E7 1040 aa15.57■□□□□ 0.08
SGCE-211ENST00000522045 MICALL2Q8IY33 904 aa15.55■□□□□ 0.08
SGCE-211ENST00000522045 FBXO22Q8NEZ5 403 aa15.51■□□□□ 0.07
SGCE-211ENST00000522045 MFRPQ9BY79 579 aa15.49■□□□□ 0.07
SGCE-211ENST00000522045 PLSCR2Q9NRY7 297 aa15.47■□□□□ 0.07
SGCE-211ENST00000522045 TMEM92Q6UXU6 159 aa15.39■□□□□ 0.05
SGCE-211ENST00000522045 CDAN1Q8IWY9 1227 aa15.39■□□□□ 0.05
SGCE-211ENST00000522045 MARVELD3Q96A59 401 aa15.39■□□□□ 0.05
SGCE-211ENST00000522045 HOXB3P14651 431 aaPredicted RBP15.37■□□□□ 0.05
SGCE-211ENST00000522045 DOK7Q18PE1 504 aa15.37■□□□□ 0.05
SGCE-211ENST00000522045 HS6ST3Q8IZP7 471 aa15.37■□□□□ 0.05
SGCE-211ENST00000522045 EMP3P54852 163 aa15.35■□□□□ 0.05
SGCE-211ENST00000522045 ZNF710Q8N1W2 664 aa15.35■□□□□ 0.05
SGCE-211ENST00000522045 RIMBP2O15034 1052 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms