RNA–Protein interactions for RNA: ENST00000521715.5

LINC00293-204, long intergenic non-protein coding RNA 293, humanhuman

TSL 1 (best) BASIC

Gene LINC00293, Length 1,498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00293-204ENST00000521715 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
LINC00293-204ENST00000521715 SPDYE2BA6NHP3 402 aa11.66□□□□□ -0.54
LINC00293-204ENST00000521715 SPDYE6P0CI01 402 aa11.66□□□□□ -0.54
LINC00293-204ENST00000521715 SPDYE2Q495Y8 402 aa11.66□□□□□ -0.54
LINC00293-204ENST00000521715 ZNF692Q9BU19 519 aaPredicted RBP11.66□□□□□ -0.54
LINC00293-204ENST00000521715 RBM42Q9BTD8 480 aaKnown RBP11.65□□□□□ -0.54
LINC00293-204ENST00000521715 VASPP50552 380 aaPredicted RBP11.63□□□□□ -0.55
LINC00293-204ENST00000521715 IFNLR1Q8IU57 520 aaPredicted RBP11.61□□□□□ -0.55
LINC00293-204ENST00000521715 SSUH2Q9Y2M2 353 aa11.59□□□□□ -0.55
LINC00293-204ENST00000521715 SHROOM4Q9ULL8 1493 aa11.57□□□□□ -0.56
LINC00293-204ENST00000521715 ZBTB7CA1YPR0 619 aa11.55□□□□□ -0.56
LINC00293-204ENST00000521715 AKT1S1Q96B36 256 aa11.54□□□□□ -0.56
LINC00293-204ENST00000521715 BRPF1P55201 1214 aaPredicted RBP11.53□□□□□ -0.56
LINC00293-204ENST00000521715 CDK11BP21127 795 aaKnown RBP11.52□□□□□ -0.56
LINC00293-204ENST00000521715 CDK11AQ9UQ88 783 aaPredicted RBP11.52□□□□□ -0.56
LINC00293-204ENST00000521715 PLEKHG5O94827 1062 aa11.51□□□□□ -0.57
LINC00293-204ENST00000521715 HMGB1P09429 215 aaKnown RBP11.51□□□□□ -0.57
LINC00293-204ENST00000521715 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC00293-204ENST00000521715 REM2Q8IYK8 340 aaPredicted RBP11.48□□□□□ -0.57
LINC00293-204ENST00000521715 ECM2O94769 699 aaPredicted RBP11.45□□□□□ -0.58
LINC00293-204ENST00000521715 PROM2Q8N271 834 aa11.45□□□□□ -0.58
LINC00293-204ENST00000521715 ARID3AQ99856 593 aa11.45□□□□□ -0.58
LINC00293-204ENST00000521715 RSPH6AQ9H0K4 717 aa11.45□□□□□ -0.58
LINC00293-204ENST00000521715 IGSF3O75054 1194 aa11.44□□□□□ -0.58
LINC00293-204ENST00000521715 ZMYND15Q9H091 742 aa11.44□□□□□ -0.58
LINC00293-204ENST00000521715 HSP90B1P14625 803 aaKnown RBP11.42□□□□□ -0.58
LINC00293-204ENST00000521715 PDIA4P13667 645 aaKnown RBP11.39□□□□□ -0.59
LINC00293-204ENST00000521715 PITPNM1O00562 1244 aa11.36□□□□□ -0.59
LINC00293-204ENST00000521715 CHMP4AQ9BY43 222 aa11.36□□□□□ -0.59
LINC00293-204ENST00000521715 NECTIN2Q92692 538 aa11.35□□□□□ -0.59
LINC00293-204ENST00000521715 CLEC11AQ9Y240 323 aa11.35□□□□□ -0.59
LINC00293-204ENST00000521715 RGL2O15211 777 aa11.32□□□□□ -0.6
LINC00293-204ENST00000521715 NEUROD2Q15784 382 aa11.32□□□□□ -0.6
LINC00293-204ENST00000521715 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
LINC00293-204ENST00000521715 C1orf115Q9H7X2 142 aa11.29□□□□□ -0.6
LINC00293-204ENST00000521715 PUS7Q96PZ0 661 aaKnown RBP11.28□□□□□ -0.6
LINC00293-204ENST00000521715 CHRDL2Q6WN34 429 aa11.26□□□□□ -0.61
LINC00293-204ENST00000521715 CHGAP10645 457 aaKnown RBP11.25□□□□□ -0.61
LINC00293-204ENST00000521715 LMOD2Q6P5Q4 547 aa11.24□□□□□ -0.61
LINC00293-204ENST00000521715 STAG3Q9UJ98 1225 aa11.23□□□□□ -0.61
LINC00293-204ENST00000521715 PRR29P0C7W0 189 aa11.21□□□□□ -0.61
LINC00293-204ENST00000521715 KCTD17Q8N5Z5 321 aa11.2□□□□□ -0.62
LINC00293-204ENST00000521715 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC00293-204ENST00000521715 SPOCK2Q92563 424 aa11.18□□□□□ -0.62
LINC00293-204ENST00000521715 RAD21O60216 631 aa11.17□□□□□ -0.62
LINC00293-204ENST00000521715 FXR2P51116 673 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC00293-204ENST00000521715 PIP4P2Q8N4L2 257 aa11.13□□□□□ -0.63
LINC00293-204ENST00000521715 RGS22Q8NE09 1264 aa11.12□□□□□ -0.63
LINC00293-204ENST00000521715 CHADLQ6NUI6 762 aa11.12□□□□□ -0.63
LINC00293-204ENST00000521715 ARID3CA6NKF2 412 aa11.11□□□□□ -0.63
LINC00293-204ENST00000521715 BRD2P25440 801 aaKnown RBP11.1□□□□□ -0.63
LINC00293-204ENST00000521715 APBB1O00213 710 aa11.09□□□□□ -0.63
LINC00293-204ENST00000521715 CREBZFQ9NS37 354 aa11.09□□□□□ -0.63
LINC00293-204ENST00000521715 MIER1Q8N108 512 aa11.08□□□□□ -0.64
LINC00293-204ENST00000521715 UBE2Q2Q8WVN8 375 aa11.07□□□□□ -0.64
LINC00293-204ENST00000521715 PRKAR2AP13861 404 aaKnown RBP11.06□□□□□ -0.64
LINC00293-204ENST00000521715 P3H3Q8IVL6 736 aa11.05□□□□□ -0.64
LINC00293-204ENST00000521715 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
LINC00293-204ENST00000521715 SLC24A3Q9HC58 644 aa11.05□□□□□ -0.64
LINC00293-204ENST00000521715 MTMR7Q9Y216 660 aa11.05□□□□□ -0.64
LINC00293-204ENST00000521715 HS6ST3Q8IZP7 471 aa11.03□□□□□ -0.64
LINC00293-204ENST00000521715 RBM25P49756 843 aaKnown RBP11.02□□□□□ -0.65
LINC00293-204ENST00000521715 DHX37Q8IY37 1157 aaKnown RBP11.02□□□□□ -0.65
LINC00293-204ENST00000521715 ZC3H15Q8WU90 426 aaKnown RBP11.01□□□□□ -0.65
LINC00293-204ENST00000521715 MNX1P50219 401 aaPredicted RBP10.98□□□□□ -0.65
LINC00293-204ENST00000521715 TRAIPQ9BWF2 469 aa10.98□□□□□ -0.65
LINC00293-204ENST00000521715 TMCO4Q5TGY1 634 aa10.97□□□□□ -0.65
LINC00293-204ENST00000521715 ZNF428Q96B54 188 aa10.97□□□□□ -0.65
LINC00293-204ENST00000521715 FOXD4L5Q5VV16 416 aaPredicted RBP10.95□□□□□ -0.66
LINC00293-204ENST00000521715 POTEHQ6S545 545 aa10.95□□□□□ -0.66
LINC00293-204ENST00000521715 FOXD4L4Q8WXT5 416 aaPredicted RBP10.95□□□□□ -0.66
LINC00293-204ENST00000521715 FARP1Q9Y4F1 1045 aaPredicted RBP10.94□□□□□ -0.66
LINC00293-204ENST00000521715 POLR3GLQ9BT43 218 aa10.93□□□□□ -0.66
LINC00293-204ENST00000521715 MFAP1P55081 439 aaKnown RBP10.93□□□□□ -0.66
LINC00293-204ENST00000521715 AEBP1Q8IUX7 1158 aa10.93□□□□□ -0.66
LINC00293-204ENST00000521715 CCDC82Q8N4S0 544 aa10.93□□□□□ -0.66
LINC00293-204ENST00000521715 GTPBP6O43824 516 aaPredicted RBP10.91□□□□□ -0.66
LINC00293-204ENST00000521715 E9PSI1 815 aa10.89□□□□□ -0.67
LINC00293-204ENST00000521715 NKX1-1Q15270 411 aaPredicted RBP10.89□□□□□ -0.67
LINC00293-204ENST00000521715 USP35Q9P2H5 1018 aa10.87□□□□□ -0.67
LINC00293-204ENST00000521715 MKRN3Q13064 507 aaKnown RBP10.87□□□□□ -0.67
LINC00293-204ENST00000521715 FAM9AQ8IZU1 332 aaPredicted RBP10.87□□□□□ -0.67
LINC00293-204ENST00000521715 TAF7LQ5H9L4 462 aa10.85□□□□□ -0.67
LINC00293-204ENST00000521715 KCNV2Q8TDN2 545 aa10.85□□□□□ -0.67
LINC00293-204ENST00000521715 PDE4CQ08493 712 aa10.84□□□□□ -0.67
LINC00293-204ENST00000521715 IL27Q8NEV9 243 aa10.84□□□□□ -0.67
LINC00293-204ENST00000521715 ZBTB47Q9UFB7 747 aaPredicted RBP10.84□□□□□ -0.67
LINC00293-204ENST00000521715 GZF1Q9H116 711 aaPredicted RBP10.82□□□□□ -0.68
LINC00293-204ENST00000521715 NUBP1P53384 320 aa10.81□□□□□ -0.68
LINC00293-204ENST00000521715 FAM177A1Q8N128 213 aaPredicted RBP10.81□□□□□ -0.68
LINC00293-204ENST00000521715 WDR70Q9NW82 654 aa10.81□□□□□ -0.68
LINC00293-204ENST00000521715 RSPH4AQ5TD94 716 aa10.8□□□□□ -0.68
LINC00293-204ENST00000521715 RASEFQ8IZ41 740 aa10.79□□□□□ -0.68
LINC00293-204ENST00000521715 GPBP1L1Q9HC44 474 aaPredicted RBP10.79□□□□□ -0.68
LINC00293-204ENST00000521715 HAX1O00165 279 aa10.78□□□□□ -0.68
LINC00293-204ENST00000521715 EVX2Q03828 476 aa10.76□□□□□ -0.69
LINC00293-204ENST00000521715 ZMYND10O75800 440 aa10.75□□□□□ -0.69
LINC00293-204ENST00000521715 CIZ1Q9ULV3 898 aaPredicted RBP10.75□□□□□ -0.69
LINC00293-204ENST00000521715 C19orf67A6NJJ6 358 aa10.74□□□□□ -0.69
LINC00293-204ENST00000521715 CD44P16070 742 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms