RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 MIER1Q8N108 512 aa8.67□□□□□ -1.02
HMGN1P28-201ENST00000521340 TSPYL2Q9H2G4 693 aaPredicted RBP8.64□□□□□ -1.03
HMGN1P28-201ENST00000521340 CCDC61Q9Y6R9 512 aa8.61□□□□□ -1.03
HMGN1P28-201ENST00000521340 RASEFQ8IZ41 740 aa8.6□□□□□ -1.03
HMGN1P28-201ENST00000521340 MS4A3Q96HJ5 214 aa8.6□□□□□ -1.03
HMGN1P28-201ENST00000521340 PKD2Q13563 968 aa8.59□□□□□ -1.03
HMGN1P28-201ENST00000521340 PELP1Q8IZL8 1130 aaKnown RBP8.59□□□□□ -1.03
HMGN1P28-201ENST00000521340 PLEKHG5O94827 1062 aa8.58□□□□□ -1.04
HMGN1P28-201ENST00000521340 PLCD3Q8N3E9 789 aa8.58□□□□□ -1.04
HMGN1P28-201ENST00000521340 KIF12Q96FN5 646 aa8.56□□□□□ -1.04
HMGN1P28-201ENST00000521340 NUBP1P53384 320 aa8.54□□□□□ -1.04
HMGN1P28-201ENST00000521340 POTEB2H3BUK9 544 aa8.53□□□□□ -1.04
HMGN1P28-201ENST00000521340 ATMINO43313 823 aaPredicted RBP8.53□□□□□ -1.04
HMGN1P28-201ENST00000521340 ASTLQ6HA08 431 aaPredicted RBP8.53□□□□□ -1.04
HMGN1P28-201ENST00000521340 MAP3K13O43283 966 aa8.51□□□□□ -1.05
HMGN1P28-201ENST00000521340 TRPC6Q9Y210 931 aa8.51□□□□□ -1.05
HMGN1P28-201ENST00000521340 PLCB2Q00722 1185 aa8.49□□□□□ -1.05
HMGN1P28-201ENST00000521340 ZBTB47Q9UFB7 747 aaPredicted RBP8.48□□□□□ -1.05
HMGN1P28-201ENST00000521340 ATN1P54259 1190 aaPredicted RBP8.47□□□□□ -1.05
HMGN1P28-201ENST00000521340 OTUD5Q96G74 571 aa8.46□□□□□ -1.06
HMGN1P28-201ENST00000521340 BMP2KQ9NSY1 1161 aaPredicted RBP8.46□□□□□ -1.06
HMGN1P28-201ENST00000521340 METRNQ9UJH8 293 aa8.45□□□□□ -1.06
HMGN1P28-201ENST00000521340 POTEJP0CG39 1038 aa8.43□□□□□ -1.06
HMGN1P28-201ENST00000521340 C7P10643 843 aa8.43□□□□□ -1.06
HMGN1P28-201ENST00000521340 SLC39A7Q92504 469 aa8.43□□□□□ -1.06
HMGN1P28-201ENST00000521340 TIE1P35590 1138 aa8.41□□□□□ -1.06
HMGN1P28-201ENST00000521340 SPOCK2Q92563 424 aa8.41□□□□□ -1.06
HMGN1P28-201ENST00000521340 FAM212AQ96EL1 285 aa8.4□□□□□ -1.06
HMGN1P28-201ENST00000521340 SGIP1Q9BQI5 828 aa8.4□□□□□ -1.06
HMGN1P28-201ENST00000521340 PCDHB13Q9Y5F0 798 aa8.4□□□□□ -1.06
HMGN1P28-201ENST00000521340 POTEFA5A3E0 1075 aa8.39□□□□□ -1.07
HMGN1P28-201ENST00000521340 TTLL13PA6NNM8 815 aa8.39□□□□□ -1.07
HMGN1P28-201ENST00000521340 IFNL1Q8IU54 200 aa8.39□□□□□ -1.07
HMGN1P28-201ENST00000521340 DCAF8Q5TAQ9 597 aa8.38□□□□□ -1.07
HMGN1P28-201ENST00000521340 PYGBP11216 843 aa8.34□□□□□ -1.07
HMGN1P28-201ENST00000521340 KLHL34Q8N239 644 aa8.33□□□□□ -1.08
HMGN1P28-201ENST00000521340 COLQQ9Y215 455 aaPredicted RBP8.33□□□□□ -1.08
HMGN1P28-201ENST00000521340 RGL2O15211 777 aa8.32□□□□□ -1.08
HMGN1P28-201ENST00000521340 TRIM35Q9UPQ4 493 aa8.32□□□□□ -1.08
HMGN1P28-201ENST00000521340 ECM2O94769 699 aaPredicted RBP8.3□□□□□ -1.08
HMGN1P28-201ENST00000521340 TMEM106CQ9BVX2 250 aa8.3□□□□□ -1.08
HMGN1P28-201ENST00000521340 PCDHB8Q9UN66 801 aa8.29□□□□□ -1.08
HMGN1P28-201ENST00000521340 BBXQ8WY36 941 aaPredicted RBP8.28□□□□□ -1.08
HMGN1P28-201ENST00000521340 IER5LQ5T953 404 aa8.27□□□□□ -1.09
HMGN1P28-201ENST00000521340 MAMSTRQ6ZN01 415 aa8.27□□□□□ -1.09
HMGN1P28-201ENST00000521340 SEC24BO95487 1268 aa8.26□□□□□ -1.09
HMGN1P28-201ENST00000521340 GSE1Q14687 1217 aa8.26□□□□□ -1.09
HMGN1P28-201ENST00000521340 KDM2AQ9Y2K7 1162 aa8.26□□□□□ -1.09
HMGN1P28-201ENST00000521340 VSIG10Q8N0Z9 540 aa8.25□□□□□ -1.09
HMGN1P28-201ENST00000521340 DCAF8L2P0C7V8 631 aa8.24□□□□□ -1.09
HMGN1P28-201ENST00000521340 HAP1P54257 671 aaPredicted RBP8.24□□□□□ -1.09
HMGN1P28-201ENST00000521340 CHRM1P11229 460 aaPredicted RBP8.23□□□□□ -1.09
HMGN1P28-201ENST00000521340 SCUBE2Q9NQ36 999 aa8.22□□□□□ -1.09
HMGN1P28-201ENST00000521340 IRX5P78411 483 aaPredicted RBP8.21□□□□□ -1.1
HMGN1P28-201ENST00000521340 LCE2DQ5TA82 110 aaPredicted RBP8.19□□□□□ -1.1
HMGN1P28-201ENST00000521340 RNF25Q96BH1 459 aaPredicted RBP8.19□□□□□ -1.1
HMGN1P28-201ENST00000521340 ZNF467Q7Z7K2 595 aaPredicted RBP8.18□□□□□ -1.1
HMGN1P28-201ENST00000521340 PLCG2P16885 1265 aa8.17□□□□□ -1.1
HMGN1P28-201ENST00000521340 DNAJC5Q9H3Z4 198 aa8.17□□□□□ -1.1
HMGN1P28-201ENST00000521340 POTEMA6NI47 508 aa8.16□□□□□ -1.1
HMGN1P28-201ENST00000521340 POTEGQ6S5H5 508 aa8.16□□□□□ -1.1
HMGN1P28-201ENST00000521340 PAXIP1Q6ZW49 1069 aaPredicted RBP8.16□□□□□ -1.1
HMGN1P28-201ENST00000521340 CIZ1Q9ULV3 898 aaPredicted RBP8.16□□□□□ -1.1
HMGN1P28-201ENST00000521340 FAM163AQ96GL9 167 aaPredicted RBP8.15□□□□□ -1.1
HMGN1P28-201ENST00000521340 OCEL1Q9H607 264 aa8.15□□□□□ -1.1
HMGN1P28-201ENST00000521340 PSEN1P49768 467 aa8.14□□□□□ -1.11
HMGN1P28-201ENST00000521340 TSHZ2Q9NRE2 1034 aa8.14□□□□□ -1.11
HMGN1P28-201ENST00000521340 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.14□□□□□ -1.11
HMGN1P28-201ENST00000521340 TRIM41Q8WV44 630 aa8.12□□□□□ -1.11
HMGN1P28-201ENST00000521340 HS6ST3Q8IZP7 471 aa8.11□□□□□ -1.11
HMGN1P28-201ENST00000521340 PDCD7Q8N8D1 485 aaKnown RBP8.11□□□□□ -1.11
HMGN1P28-201ENST00000521340 CHGAP10645 457 aaKnown RBP8.1□□□□□ -1.11
HMGN1P28-201ENST00000521340 SPRYD3Q8NCJ5 442 aa8.1□□□□□ -1.11
HMGN1P28-201ENST00000521340 SLAIN1Q8ND83 568 aa8.1□□□□□ -1.11
HMGN1P28-201ENST00000521340 PDAP1Q13442 181 aaKnown RBP8.09□□□□□ -1.11
HMGN1P28-201ENST00000521340 NKX1-1Q15270 411 aaPredicted RBP8.09□□□□□ -1.11
HMGN1P28-201ENST00000521340 BCANQ96GW7 911 aa8.09□□□□□ -1.11
HMGN1P28-201ENST00000521340 CFAP44Q96MT7 982 aa8.09□□□□□ -1.11
HMGN1P28-201ENST00000521340 MKRN3Q13064 507 aaKnown RBP8.07□□□□□ -1.12
HMGN1P28-201ENST00000521340 PRKCSHP14314 528 aaPredicted RBP8.06□□□□□ -1.12
HMGN1P28-201ENST00000521340 ILDR1Q86SU0 546 aaPredicted RBP8.06□□□□□ -1.12
HMGN1P28-201ENST00000521340 PLSCR2Q9NRY7 297 aa8.06□□□□□ -1.12
HMGN1P28-201ENST00000521340 GOLGA2Q08379 1002 aa8.05□□□□□ -1.12
HMGN1P28-201ENST00000521340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.05□□□□□ -1.12
HMGN1P28-201ENST00000521340 CABP2Q9NPB3 220 aa8.04□□□□□ -1.12
HMGN1P28-201ENST00000521340 TAOK2Q9UL54 1235 aa8.04□□□□□ -1.12
HMGN1P28-201ENST00000521340 DPY19L2Q6NUT2 758 aa8.03□□□□□ -1.12
HMGN1P28-201ENST00000521340 GTPBP6O43824 516 aaPredicted RBP8.02□□□□□ -1.13
HMGN1P28-201ENST00000521340 ST18O60284 1047 aa8.02□□□□□ -1.13
HMGN1P28-201ENST00000521340 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.02□□□□□ -1.13
HMGN1P28-201ENST00000521340 RIOK3O14730 519 aaKnown RBP8□□□□□ -1.13
HMGN1P28-201ENST00000521340 L3MBTL3Q96JM7 780 aaPredicted RBP8□□□□□ -1.13
HMGN1P28-201ENST00000521340 PCDH10Q9P2E7 1040 aa8□□□□□ -1.13
HMGN1P28-201ENST00000521340 EFCAB3Q8N7B9 438 aa7.96□□□□□ -1.14
HMGN1P28-201ENST00000521340 C3orf67Q6ZVT6 689 aa7.95□□□□□ -1.14
HMGN1P28-201ENST00000521340 VGFO15240 615 aaPredicted RBP7.94□□□□□ -1.14
HMGN1P28-201ENST00000521340 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.93□□□□□ -1.14
HMGN1P28-201ENST00000521340 ZFP91Q96JP5 570 aaPredicted RBP7.93□□□□□ -1.14
HMGN1P28-201ENST00000521340 BOLA1Q9Y3E2 137 aa7.93□□□□□ -1.14
HMGN1P28-201ENST00000521340 SNPHO15079 494 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms