RNA–Protein interactions for RNA: ENST00000521189.1

CLVS1-207, Transcript of clavesin 1, humanhuman

TSL 2

Gene CLVS1, Length 2,532 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-207ENST00000521189 CDK11BP21127 795 aaKnown RBP9.74□□□□□ -0.85
CLVS1-207ENST00000521189 DIEXFQ68CQ4 756 aaKnown RBP9.74□□□□□ -0.85
CLVS1-207ENST00000521189 FANCIQ9NVI1 1328 aa9.73□□□□□ -0.85
CLVS1-207ENST00000521189 MYO15BQ96JP2 1530 aa9.72□□□□□ -0.85
CLVS1-207ENST00000521189 SAMD1Q6SPF0 538 aaPredicted RBP9.71□□□□□ -0.86
CLVS1-207ENST00000521189 NAP1L5Q96NT1 182 aaPredicted RBP9.71□□□□□ -0.86
CLVS1-207ENST00000521189 SUPT16HQ9Y5B9 1047 aaKnown RBP9.71□□□□□ -0.86
CLVS1-207ENST00000521189 CCER1Q8TC90 406 aaPredicted RBP9.69□□□□□ -0.86
CLVS1-207ENST00000521189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.69□□□□□ -0.86
CLVS1-207ENST00000521189 A0A0U1RQG5 324 aaPredicted RBP9.68□□□□□ -0.86
CLVS1-207ENST00000521189 HMGB1P09429 215 aaKnown RBP9.68□□□□□ -0.86
CLVS1-207ENST00000521189 TPRNQ4KMQ1 711 aa9.66□□□□□ -0.86
CLVS1-207ENST00000521189 VSIG10Q8N0Z9 540 aa9.66□□□□□ -0.86
CLVS1-207ENST00000521189 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.66□□□□□ -0.86
CLVS1-207ENST00000521189 LOC105371045A0A1W2PR82 267 aa9.63□□□□□ -0.87
CLVS1-207ENST00000521189 RBM19Q9Y4C8 960 aaKnown RBP9.63□□□□□ -0.87
CLVS1-207ENST00000521189 DHX37Q8IY37 1157 aaKnown RBP9.63□□□□□ -0.87
CLVS1-207ENST00000521189 C11orf95C9JLR9 678 aaPredicted RBP9.61□□□□□ -0.87
CLVS1-207ENST00000521189 HAP1P54257 671 aaPredicted RBP9.61□□□□□ -0.87
CLVS1-207ENST00000521189 U3KPZ7 1027 aaPredicted RBP9.59□□□□□ -0.87
CLVS1-207ENST00000521189 ARID3AQ99856 593 aa9.58□□□□□ -0.88
CLVS1-207ENST00000521189 IPO4Q8TEX9 1081 aaKnown RBP9.57□□□□□ -0.88
CLVS1-207ENST00000521189 PAXIP1Q6ZW49 1069 aaPredicted RBP9.56□□□□□ -0.88
CLVS1-207ENST00000521189 NAP1L2Q9ULW6 460 aaPredicted RBP9.55□□□□□ -0.88
CLVS1-207ENST00000521189 RRP9O43818 475 aaKnown RBP9.54□□□□□ -0.88
CLVS1-207ENST00000521189 TRIM41Q8WV44 630 aa9.54□□□□□ -0.88
CLVS1-207ENST00000521189 TEX2Q8IWB9 1127 aa9.52□□□□□ -0.88
CLVS1-207ENST00000521189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.51□□□□□ -0.89
CLVS1-207ENST00000521189 NCLP19338 710 aaKnown RBP9.51□□□□□ -0.89
CLVS1-207ENST00000521189 HNRNPUL2Q1KMD3 747 aaKnown RBP9.51□□□□□ -0.89
CLVS1-207ENST00000521189 CHRM1P11229 460 aaPredicted RBP9.51□□□□□ -0.89
CLVS1-207ENST00000521189 SHROOM4Q9ULL8 1493 aa9.5□□□□□ -0.89
CLVS1-207ENST00000521189 TMEM132AQ24JP5 1023 aa9.5□□□□□ -0.89
CLVS1-207ENST00000521189 IL27Q8NEV9 243 aa9.49□□□□□ -0.89
CLVS1-207ENST00000521189 ARID4BQ4LE39 1312 aaPredicted RBP9.47□□□□□ -0.89
CLVS1-207ENST00000521189 ZNF219Q9P2Y4 722 aaPredicted RBP9.46□□□□□ -0.9
CLVS1-207ENST00000521189 RTL5Q5HYW3 569 aaPredicted RBP9.45□□□□□ -0.9
CLVS1-207ENST00000521189 FTSJ3Q8IY81 847 aaKnown RBP9.44□□□□□ -0.9
CLVS1-207ENST00000521189 CALD1Q05682 793 aaKnown RBP9.44□□□□□ -0.9
CLVS1-207ENST00000521189 CENPJQ9HC77 1338 aaPredicted RBP9.44□□□□□ -0.9
CLVS1-207ENST00000521189 CNGB1Q14028 1251 aaPredicted RBP9.43□□□□□ -0.9
CLVS1-207ENST00000521189 VGFO15240 615 aaPredicted RBP9.43□□□□□ -0.9
CLVS1-207ENST00000521189 CCDC9Q9Y3X0 531 aaKnown RBP9.42□□□□□ -0.9
CLVS1-207ENST00000521189 CANXP27824 592 aaKnown RBP9.42□□□□□ -0.9
CLVS1-207ENST00000521189 HSP90AA2PQ14568 343 aaPredicted RBP9.42□□□□□ -0.9
CLVS1-207ENST00000521189 BBXQ8WY36 941 aaPredicted RBP9.41□□□□□ -0.9
CLVS1-207ENST00000521189 USP35Q9P2H5 1018 aa9.41□□□□□ -0.9
CLVS1-207ENST00000521189 FAM43AQ8N2R8 423 aa9.4□□□□□ -0.9
CLVS1-207ENST00000521189 WASHC2CQ9Y4E1 1318 aa9.4□□□□□ -0.9
CLVS1-207ENST00000521189 TICAM2Q86XR7 235 aa9.4□□□□□ -0.91
CLVS1-207ENST00000521189 ZNF316A6NFI3 1004 aaPredicted RBP9.39□□□□□ -0.91
CLVS1-207ENST00000521189 ZFP91Q96JP5 570 aaPredicted RBP9.38□□□□□ -0.91
CLVS1-207ENST00000521189 POLR3GLQ9BT43 218 aa9.38□□□□□ -0.91
CLVS1-207ENST00000521189 SPDYE4A6NLX3 237 aa9.37□□□□□ -0.91
CLVS1-207ENST00000521189 CLSTN1O94985 981 aa9.37□□□□□ -0.91
CLVS1-207ENST00000521189 PPM1GO15355 546 aaPredicted RBP9.36□□□□□ -0.91
CLVS1-207ENST00000521189 PUS7Q96PZ0 661 aaKnown RBP9.35□□□□□ -0.91
CLVS1-207ENST00000521189 WASHC2AQ641Q2 1341 aa9.34□□□□□ -0.91
CLVS1-207ENST00000521189 GTF2E1P29083 439 aaPredicted RBP9.34□□□□□ -0.91
CLVS1-207ENST00000521189 MKRN4PQ13434 485 aaPredicted RBP9.34□□□□□ -0.91
CLVS1-207ENST00000521189 NEFMP07197 916 aa9.34□□□□□ -0.91
CLVS1-207ENST00000521189 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.34□□□□□ -0.91
CLVS1-207ENST00000521189 ANP32BQ92688 251 aaKnown RBP9.33□□□□□ -0.92
CLVS1-207ENST00000521189 PRDM4Q9UKN5 801 aa9.33□□□□□ -0.92
CLVS1-207ENST00000521189 PTMAP06454 111 aaKnown RBP9.33□□□□□ -0.92
CLVS1-207ENST00000521189 CHMP4BQ9H444 224 aaKnown RBP9.33□□□□□ -0.92
CLVS1-207ENST00000521189 PLCB2Q00722 1185 aa9.32□□□□□ -0.92
CLVS1-207ENST00000521189 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.32□□□□□ -0.92
CLVS1-207ENST00000521189 NOP58Q9Y2X3 529 aaKnown RBP9.32□□□□□ -0.92
CLVS1-207ENST00000521189 SECISBP2LQ93073 1101 aaKnown RBP9.31□□□□□ -0.92
CLVS1-207ENST00000521189 STAC3Q96MF2 364 aa9.31□□□□□ -0.92
CLVS1-207ENST00000521189 HSP90AA1P07900 732 aaKnown RBP9.3□□□□□ -0.92
CLVS1-207ENST00000521189 MCCP23508 829 aa9.29□□□□□ -0.92
CLVS1-207ENST00000521189 GRIPAP1Q4V328 841 aa9.29□□□□□ -0.92
CLVS1-207ENST00000521189 PTMSP20962 102 aa9.29□□□□□ -0.92
CLVS1-207ENST00000521189 CLGNO14967 610 aa9.28□□□□□ -0.92
CLVS1-207ENST00000521189 TRHP20396 242 aaPredicted RBP9.27□□□□□ -0.93
CLVS1-207ENST00000521189 NPM1P06748 294 aaKnown RBP eCLIP9.26□□□□□ -0.93
CLVS1-207ENST00000521189 VASPP50552 380 aaPredicted RBP9.26□□□□□ -0.93
CLVS1-207ENST00000521189 SETQ01105 290 aaPredicted RBP9.26□□□□□ -0.93
CLVS1-207ENST00000521189 MIER1Q8N108 512 aa9.25□□□□□ -0.93
CLVS1-207ENST00000521189 CNPY4Q8N129 248 aa9.25□□□□□ -0.93
CLVS1-207ENST00000521189 SPINK5Q9NQ38 1064 aaPredicted RBP9.25□□□□□ -0.93
CLVS1-207ENST00000521189 AXDND1Q5T1B0 1012 aaPredicted RBP9.24□□□□□ -0.93
CLVS1-207ENST00000521189 PDCL3Q9H2J4 239 aa9.24□□□□□ -0.93
CLVS1-207ENST00000521189 IFNLR1Q8IU57 520 aaPredicted RBP9.24□□□□□ -0.93
CLVS1-207ENST00000521189 PLCD4Q9BRC7 762 aa9.23□□□□□ -0.93
CLVS1-207ENST00000521189 ANP32AP39687 249 aaKnown RBP9.23□□□□□ -0.93
CLVS1-207ENST00000521189 MMP14P50281 582 aa9.22□□□□□ -0.93
CLVS1-207ENST00000521189 POLA2Q14181 598 aa9.22□□□□□ -0.93
CLVS1-207ENST00000521189 ZNF622Q969S3 477 aaKnown RBP eCLIP9.22□□□□□ -0.93
CLVS1-207ENST00000521189 IGSF3O75054 1194 aa9.21□□□□□ -0.94
CLVS1-207ENST00000521189 IRX6P78412 446 aaPredicted RBP9.21□□□□□ -0.94
CLVS1-207ENST00000521189 PSMD1Q99460 953 aa9.21□□□□□ -0.94
CLVS1-207ENST00000521189 UBTFP17480 764 aaKnown RBP9.2□□□□□ -0.94
CLVS1-207ENST00000521189 PHF14O94880 888 aa9.19□□□□□ -0.94
CLVS1-207ENST00000521189 SUPT5HO00267 1087 aaKnown RBP9.18□□□□□ -0.94
CLVS1-207ENST00000521189 NBR1Q14596 966 aa9.18□□□□□ -0.94
CLVS1-207ENST00000521189 PROM2Q8N271 834 aa9.18□□□□□ -0.94
CLVS1-207ENST00000521189 FBLN2P98095 1184 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms