RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 ASTLQ6HA08 431 aaPredicted RBP13.02□□□□□ -0.33
HDAC2-208ENST00000520746 ATMINO43313 823 aaPredicted RBP13□□□□□ -0.33
HDAC2-208ENST00000520746 FKBP8Q14318 412 aa13□□□□□ -0.33
HDAC2-208ENST00000520746 RASEFQ8IZ41 740 aa13□□□□□ -0.33
HDAC2-208ENST00000520746 KIF12Q96FN5 646 aa12.99□□□□□ -0.33
HDAC2-208ENST00000520746 PLCD3Q8N3E9 789 aa12.98□□□□□ -0.33
HDAC2-208ENST00000520746 OTUD5Q96G74 571 aa12.96□□□□□ -0.33
HDAC2-208ENST00000520746 METRNQ9UJH8 293 aa12.94□□□□□ -0.34
HDAC2-208ENST00000520746 MAP3K13O43283 966 aa12.92□□□□□ -0.34
HDAC2-208ENST00000520746 SLC39A7Q92504 469 aa12.92□□□□□ -0.34
HDAC2-208ENST00000520746 ATN1P54259 1190 aaPredicted RBP12.9□□□□□ -0.34
HDAC2-208ENST00000520746 TRPC6Q9Y210 931 aa12.9□□□□□ -0.34
HDAC2-208ENST00000520746 C7P10643 843 aa12.89□□□□□ -0.35
HDAC2-208ENST00000520746 NUBP1P53384 320 aa12.87□□□□□ -0.35
HDAC2-208ENST00000520746 BMP2KQ9NSY1 1161 aaPredicted RBP12.87□□□□□ -0.35
HDAC2-208ENST00000520746 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
HDAC2-208ENST00000520746 POTEJP0CG39 1038 aa12.83□□□□□ -0.36
HDAC2-208ENST00000520746 TIE1P35590 1138 aa12.82□□□□□ -0.36
HDAC2-208ENST00000520746 POTEFA5A3E0 1075 aa12.77□□□□□ -0.37
HDAC2-208ENST00000520746 PCDHB13Q9Y5F0 798 aa12.77□□□□□ -0.37
HDAC2-208ENST00000520746 TTLL13PA6NNM8 815 aa12.76□□□□□ -0.37
HDAC2-208ENST00000520746 FAM212AQ96EL1 285 aa12.76□□□□□ -0.37
HDAC2-208ENST00000520746 SGIP1Q9BQI5 828 aa12.76□□□□□ -0.37
HDAC2-208ENST00000520746 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
HDAC2-208ENST00000520746 MAMSTRQ6ZN01 415 aa12.71□□□□□ -0.37
HDAC2-208ENST00000520746 IFNL1Q8IU54 200 aa12.71□□□□□ -0.37
HDAC2-208ENST00000520746 TRIM35Q9UPQ4 493 aa12.68□□□□□ -0.38
HDAC2-208ENST00000520746 COLQQ9Y215 455 aaPredicted RBP12.68□□□□□ -0.38
HDAC2-208ENST00000520746 SCUBE2Q9NQ36 999 aa12.65□□□□□ -0.38
HDAC2-208ENST00000520746 SEC24BO95487 1268 aa12.63□□□□□ -0.39
HDAC2-208ENST00000520746 IER5LQ5T953 404 aa12.63□□□□□ -0.39
HDAC2-208ENST00000520746 DCAF8Q5TAQ9 597 aa12.63□□□□□ -0.39
HDAC2-208ENST00000520746 POTEMA6NI47 508 aa12.62□□□□□ -0.39
HDAC2-208ENST00000520746 TMEM106CQ9BVX2 250 aa12.61□□□□□ -0.39
HDAC2-208ENST00000520746 PYGBP11216 843 aa12.6□□□□□ -0.39
HDAC2-208ENST00000520746 VASPP50552 380 aaPredicted RBP12.6□□□□□ -0.39
HDAC2-208ENST00000520746 POTEGQ6S5H5 508 aa12.59□□□□□ -0.39
HDAC2-208ENST00000520746 PLSCR2Q9NRY7 297 aa12.56□□□□□ -0.4
HDAC2-208ENST00000520746 LCE2DQ5TA82 110 aaPredicted RBP12.55□□□□□ -0.4
HDAC2-208ENST00000520746 KLHL34Q8N239 644 aa12.54□□□□□ -0.4
HDAC2-208ENST00000520746 PCDHB8Q9UN66 801 aa12.52□□□□□ -0.41
HDAC2-208ENST00000520746 IRX5P78411 483 aaPredicted RBP12.49□□□□□ -0.41
HDAC2-208ENST00000520746 FAM163AQ96GL9 167 aaPredicted RBP12.49□□□□□ -0.41
HDAC2-208ENST00000520746 PLCG2P16885 1265 aa12.48□□□□□ -0.41
HDAC2-208ENST00000520746 GSE1Q14687 1217 aa12.47□□□□□ -0.41
HDAC2-208ENST00000520746 ZNF467Q7Z7K2 595 aaPredicted RBP12.41□□□□□ -0.42
HDAC2-208ENST00000520746 OCEL1Q9H607 264 aa12.4□□□□□ -0.42
HDAC2-208ENST00000520746 CHRM1P11229 460 aaPredicted RBP12.39□□□□□ -0.43
HDAC2-208ENST00000520746 SLAIN1Q8ND83 568 aa12.39□□□□□ -0.43
HDAC2-208ENST00000520746 IFNLR1Q8IU57 520 aaPredicted RBP12.38□□□□□ -0.43
HDAC2-208ENST00000520746 PCDH10Q9P2E7 1040 aa12.38□□□□□ -0.43
HDAC2-208ENST00000520746 SPOCK2Q92563 424 aa12.34□□□□□ -0.43
HDAC2-208ENST00000520746 PSEN1P49768 467 aa12.31□□□□□ -0.44
HDAC2-208ENST00000520746 PDCD7Q8N8D1 485 aaKnown RBP12.3□□□□□ -0.44
HDAC2-208ENST00000520746 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
HDAC2-208ENST00000520746 CIZ1Q9ULV3 898 aaPredicted RBP12.28□□□□□ -0.44
HDAC2-208ENST00000520746 ST18O60284 1047 aa12.27□□□□□ -0.45
HDAC2-208ENST00000520746 MKRN3Q13064 507 aaKnown RBP12.27□□□□□ -0.45
HDAC2-208ENST00000520746 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.26□□□□□ -0.45
HDAC2-208ENST00000520746 PDAP1Q13442 181 aaKnown RBP12.25□□□□□ -0.45
HDAC2-208ENST00000520746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.22□□□□□ -0.457e-8■■■□□ 16.1
HDAC2-208ENST00000520746 CDAN1Q8IWY9 1227 aa12.19□□□□□ -0.46
HDAC2-208ENST00000520746 ILDR1Q86SU0 546 aaPredicted RBP12.18□□□□□ -0.46
HDAC2-208ENST00000520746 L3MBTL3Q96JM7 780 aaPredicted RBP12.18□□□□□ -0.46
HDAC2-208ENST00000520746 C3orf67Q6ZVT6 689 aa12.17□□□□□ -0.46
HDAC2-208ENST00000520746 CABP2Q9NPB3 220 aa12.17□□□□□ -0.46
HDAC2-208ENST00000520746 SNPHO15079 494 aa12.15□□□□□ -0.46
HDAC2-208ENST00000520746 DPY19L2Q6NUT2 758 aa12.13□□□□□ -0.47
HDAC2-208ENST00000520746 TMEM121BQ9BXQ6 578 aaPredicted RBP12.13□□□□□ -0.47
HDAC2-208ENST00000520746 TRIM41Q8WV44 630 aa12.1□□□□□ -0.47
HDAC2-208ENST00000520746 MARVELD3Q96A59 401 aa12.07□□□□□ -0.48
HDAC2-208ENST00000520746 BOLA1Q9Y3E2 137 aa12.03□□□□□ -0.48
HDAC2-208ENST00000520746 EFCAB3Q8N7B9 438 aa12.02□□□□□ -0.49
HDAC2-208ENST00000520746 G3V3G9 751 aa12□□□□□ -0.49
HDAC2-208ENST00000520746 RNF25Q96BH1 459 aaPredicted RBP12□□□□□ -0.49
HDAC2-208ENST00000520746 RIOK3O14730 519 aaKnown RBP11.96□□□□□ -0.49
HDAC2-208ENST00000520746 EMP3P54852 163 aa11.96□□□□□ -0.49
HDAC2-208ENST00000520746 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.93□□□□□ -0.5
HDAC2-208ENST00000520746 HOXB3P14651 431 aaPredicted RBP11.93□□□□□ -0.5
HDAC2-208ENST00000520746 ZFP91Q96JP5 570 aaPredicted RBP11.93□□□□□ -0.5
HDAC2-208ENST00000520746 POTEB3A0JP26 581 aa11.91□□□□□ -0.5
HDAC2-208ENST00000520746 VGFO15240 615 aaPredicted RBP11.91□□□□□ -0.5
HDAC2-208ENST00000520746 POTEBQ6S5H4 581 aa11.91□□□□□ -0.5
HDAC2-208ENST00000520746 SPNS2Q8IVW8 549 aa11.9□□□□□ -0.5
HDAC2-208ENST00000520746 HS3ST6Q96QI5 342 aa11.89□□□□□ -0.51
HDAC2-208ENST00000520746 FAM205CA6NFA0 338 aa11.88□□□□□ -0.51
HDAC2-208ENST00000520746 SOX12O15370 315 aa11.88□□□□□ -0.51
HDAC2-208ENST00000520746 MICALL2Q8IY33 904 aa11.88□□□□□ -0.51
HDAC2-208ENST00000520746 MS4A4AQ96JQ5 239 aa11.88□□□□□ -0.51
HDAC2-208ENST00000520746 MMRN1Q13201 1228 aa11.87□□□□□ -0.51
HDAC2-208ENST00000520746 PHF8Q9UPP1 1060 aa11.85□□□□□ -0.51
HDAC2-208ENST00000520746 TMEM92Q6UXU6 159 aa11.84□□□□□ -0.51
HDAC2-208ENST00000520746 KRTAP3-3Q9BYR6 98 aa11.84□□□□□ -0.51
HDAC2-208ENST00000520746 KRTAP3-2Q9BYR7 98 aa11.84□□□□□ -0.51
HDAC2-208ENST00000520746 DOK7Q18PE1 504 aa11.83□□□□□ -0.52
HDAC2-208ENST00000520746 HOXB1P14653 301 aaPredicted RBP11.82□□□□□ -0.52
HDAC2-208ENST00000520746 ZNF710Q8N1W2 664 aa11.82□□□□□ -0.52
HDAC2-208ENST00000520746 BCL11BQ9C0K0 894 aaPredicted RBP11.78□□□□□ -0.52
HDAC2-208ENST00000520746 RIMBP2O15034 1052 aa11.75□□□□□ -0.53
HDAC2-208ENST00000520746 FBXO22Q8NEZ5 403 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 1199.8 ms