RNA–Protein interactions for RNA: ENST00000519888.5

AP3B1-205, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 5

Gene AP3B1, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-205ENST00000519888 CCDC61Q9Y6R9 512 aa14.24□□□□□ -0.13
AP3B1-205ENST00000519888 MS4A3Q96HJ5 214 aa14.19□□□□□ -0.14
AP3B1-205ENST00000519888 NUBP1P53384 320 aa14.17□□□□□ -0.14
AP3B1-205ENST00000519888 LHX8Q68G74 356 aa14.15□□□□□ -0.14
AP3B1-205ENST00000519888 KIF12Q96FN5 646 aa14.15□□□□□ -0.14
AP3B1-205ENST00000519888 VASPP50552 380 aaPredicted RBP14.14□□□□□ -0.15
AP3B1-205ENST00000519888 FAM212AQ96EL1 285 aa14.11□□□□□ -0.15
AP3B1-205ENST00000519888 MAP3K13O43283 966 aa14.08□□□□□ -0.16
AP3B1-205ENST00000519888 KLHL34Q8N239 644 aa14.07□□□□□ -0.16
AP3B1-205ENST00000519888 ASTLQ6HA08 431 aaPredicted RBP14.04□□□□□ -0.16
AP3B1-205ENST00000519888 ATMINO43313 823 aaPredicted RBP14.02□□□□□ -0.17
AP3B1-205ENST00000519888 DCAF8Q5TAQ9 597 aa14.02□□□□□ -0.17
AP3B1-205ENST00000519888 PELP1Q8IZL8 1130 aaKnown RBP14□□□□□ -0.17
AP3B1-205ENST00000519888 SGIP1Q9BQI5 828 aa13.99□□□□□ -0.17
AP3B1-205ENST00000519888 PCDHB13Q9Y5F0 798 aa13.98□□□□□ -0.17
AP3B1-205ENST00000519888 TRPC6Q9Y210 931 aa13.96□□□□□ -0.17
AP3B1-205ENST00000519888 TIE1P35590 1138 aa13.94□□□□□ -0.18
AP3B1-205ENST00000519888 SLC39A7Q92504 469 aa13.94□□□□□ -0.18
AP3B1-205ENST00000519888 BMP2KQ9NSY1 1161 aaPredicted RBP13.94□□□□□ -0.18
AP3B1-205ENST00000519888 ATN1P54259 1190 aaPredicted RBP13.93□□□□□ -0.18
AP3B1-205ENST00000519888 C7P10643 843 aa13.91□□□□□ -0.18
AP3B1-205ENST00000519888 METRNQ9UJH8 293 aa13.91□□□□□ -0.18
AP3B1-205ENST00000519888 GSE1Q14687 1217 aa13.9□□□□□ -0.18
AP3B1-205ENST00000519888 PYGBP11216 843 aa13.89□□□□□ -0.19
AP3B1-205ENST00000519888 IFNL1Q8IU54 200 aa13.89□□□□□ -0.19
AP3B1-205ENST00000519888 IFNLR1Q8IU57 520 aaPredicted RBP13.89□□□□□ -0.19
AP3B1-205ENST00000519888 TTLL13PA6NNM8 815 aa13.86□□□□□ -0.19
AP3B1-205ENST00000519888 SPOCK2Q92563 424 aa13.85□□□□□ -0.19
AP3B1-205ENST00000519888 POTEB2H3BUK9 544 aa13.83□□□□□ -0.2
AP3B1-205ENST00000519888 TMEM106CQ9BVX2 250 aa13.78□□□□□ -0.2
AP3B1-205ENST00000519888 TRIM35Q9UPQ4 493 aa13.78□□□□□ -0.2
AP3B1-205ENST00000519888 PCDHB8Q9UN66 801 aa13.76□□□□□ -0.21
AP3B1-205ENST00000519888 OTUD5Q96G74 571 aa13.75□□□□□ -0.21
AP3B1-205ENST00000519888 CIZ1Q9ULV3 898 aaPredicted RBP13.75□□□□□ -0.21
AP3B1-205ENST00000519888 CHRM1P11229 460 aaPredicted RBP13.73□□□□□ -0.21
AP3B1-205ENST00000519888 SEC24BO95487 1268 aa13.72□□□□□ -0.21
AP3B1-205ENST00000519888 IER5LQ5T953 404 aa13.72□□□□□ -0.21
AP3B1-205ENST00000519888 ZNF467Q7Z7K2 595 aaPredicted RBP13.72□□□□□ -0.21
AP3B1-205ENST00000519888 POTEFA5A3E0 1075 aa13.7□□□□□ -0.22
AP3B1-205ENST00000519888 MAMSTRQ6ZN01 415 aa13.69□□□□□ -0.22
AP3B1-205ENST00000519888 POTEJP0CG39 1038 aa13.67□□□□□ -0.22
AP3B1-205ENST00000519888 COLQQ9Y215 455 aaPredicted RBP13.67□□□□□ -0.22
AP3B1-205ENST00000519888 SCUBE2Q9NQ36 999 aa13.62□□□□□ -0.23
AP3B1-205ENST00000519888 PLCG2P16885 1265 aa13.6□□□□□ -0.23
AP3B1-205ENST00000519888 PSEN1P49768 467 aa13.58□□□□□ -0.24
AP3B1-205ENST00000519888 TRIM41Q8WV44 630 aa13.58□□□□□ -0.24
AP3B1-205ENST00000519888 IRX5P78411 483 aaPredicted RBP13.56□□□□□ -0.24
AP3B1-205ENST00000519888 GOLGA2Q08379 1002 aa13.55□□□□□ -0.24
AP3B1-205ENST00000519888 PDAP1Q13442 181 aaKnown RBP13.55□□□□□ -0.24
AP3B1-205ENST00000519888 OCEL1Q9H607 264 aa13.53□□□□□ -0.24
AP3B1-205ENST00000519888 MKRN3Q13064 507 aaKnown RBP13.51□□□□□ -0.25
AP3B1-205ENST00000519888 CABP2Q9NPB3 220 aa13.42□□□□□ -0.26
AP3B1-205ENST00000519888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.41□□□□□ -0.268e-11■■■■■ 48.4
AP3B1-205ENST00000519888 PDCD7Q8N8D1 485 aaKnown RBP13.39□□□□□ -0.27
AP3B1-205ENST00000519888 RIOK3O14730 519 aaKnown RBP13.37□□□□□ -0.27
AP3B1-205ENST00000519888 SLAIN1Q8ND83 568 aa13.37□□□□□ -0.27
AP3B1-205ENST00000519888 RNF25Q96BH1 459 aaPredicted RBP13.34□□□□□ -0.27
AP3B1-205ENST00000519888 FAM163AQ96GL9 167 aaPredicted RBP13.34□□□□□ -0.27
AP3B1-205ENST00000519888 L3MBTL3Q96JM7 780 aaPredicted RBP13.34□□□□□ -0.27
AP3B1-205ENST00000519888 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.32□□□□□ -0.28
AP3B1-205ENST00000519888 VGFO15240 615 aaPredicted RBP13.31□□□□□ -0.28
AP3B1-205ENST00000519888 POTEMA6NI47 508 aa13.3□□□□□ -0.28
AP3B1-205ENST00000519888 ILDR1Q86SU0 546 aaPredicted RBP13.3□□□□□ -0.28
AP3B1-205ENST00000519888 POTEGQ6S5H5 508 aa13.29□□□□□ -0.28
AP3B1-205ENST00000519888 EFCAB3Q8N7B9 438 aa13.28□□□□□ -0.28
AP3B1-205ENST00000519888 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.27□□□□□ -0.29
AP3B1-205ENST00000519888 C3orf67Q6ZVT6 689 aa13.27□□□□□ -0.29
AP3B1-205ENST00000519888 ZFP91Q96JP5 570 aaPredicted RBP13.27□□□□□ -0.29
AP3B1-205ENST00000519888 TAOK2Q9UL54 1235 aa13.26□□□□□ -0.29
AP3B1-205ENST00000519888 ECM2O94769 699 aaPredicted RBP13.25□□□□□ -0.29
AP3B1-205ENST00000519888 LCE2DQ5TA82 110 aaPredicted RBP13.24□□□□□ -0.29
AP3B1-205ENST00000519888 DPY19L2Q6NUT2 758 aa13.24□□□□□ -0.29
AP3B1-205ENST00000519888 G3V3G9 751 aa13.23□□□□□ -0.29
AP3B1-205ENST00000519888 PKD2Q13563 968 aa13.19□□□□□ -0.3
AP3B1-205ENST00000519888 BOLA1Q9Y3E2 137 aa13.19□□□□□ -0.3
AP3B1-205ENST00000519888 SOX12O15370 315 aa13.18□□□□□ -0.3
AP3B1-205ENST00000519888 SNPHO15079 494 aa13.17□□□□□ -0.3
AP3B1-205ENST00000519888 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
AP3B1-205ENST00000519888 ST18O60284 1047 aa13.13□□□□□ -0.31
AP3B1-205ENST00000519888 STK24Q9Y6E0 443 aa13.13□□□□□ -0.31
AP3B1-205ENST00000519888 RGL2O15211 777 aa13.12□□□□□ -0.31
AP3B1-205ENST00000519888 STK25O00506 426 aa13.1□□□□□ -0.31
AP3B1-205ENST00000519888 PCDH10Q9P2E7 1040 aa13.1□□□□□ -0.31
AP3B1-205ENST00000519888 PHF8Q9UPP1 1060 aa13.1□□□□□ -0.31
AP3B1-205ENST00000519888 TMEM121BQ9BXQ6 578 aaPredicted RBP13.08□□□□□ -0.32
AP3B1-205ENST00000519888 MS4A4AQ96JQ5 239 aa13.06□□□□□ -0.32
AP3B1-205ENST00000519888 NLRP6P59044 892 aa13.05□□□□□ -0.32
AP3B1-205ENST00000519888 PLSCR2Q9NRY7 297 aa13.05□□□□□ -0.32
AP3B1-205ENST00000519888 MICALL2Q8IY33 904 aa13.03□□□□□ -0.32
AP3B1-205ENST00000519888 FBXO22Q8NEZ5 403 aa12.99□□□□□ -0.33
AP3B1-205ENST00000519888 MFRPQ9BY79 579 aa12.98□□□□□ -0.33
AP3B1-205ENST00000519888 CDAN1Q8IWY9 1227 aa12.95□□□□□ -0.34
AP3B1-205ENST00000519888 MARVELD3Q96A59 401 aa12.94□□□□□ -0.34
AP3B1-205ENST00000519888 TMEM92Q6UXU6 159 aa12.91□□□□□ -0.34
AP3B1-205ENST00000519888 HOXB3P14651 431 aaPredicted RBP12.9□□□□□ -0.34
AP3B1-205ENST00000519888 DOK7Q18PE1 504 aa12.9□□□□□ -0.34
AP3B1-205ENST00000519888 EMP3P54852 163 aa12.89□□□□□ -0.35
AP3B1-205ENST00000519888 ZNF710Q8N1W2 664 aa12.89□□□□□ -0.35
AP3B1-205ENST00000519888 RIMBP2O15034 1052 aa12.85□□□□□ -0.35
AP3B1-205ENST00000519888 HS6ST3Q8IZP7 471 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms