RNA–Protein interactions for RNA: ENST00000519100.5

PABPC1-209, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-209ENST00000519100 TSPYL2Q9H2G4 693 aaPredicted RBP9.67□□□□□ -0.86
PABPC1-209ENST00000519100 NUBP1P53384 320 aa9.62□□□□□ -0.87
PABPC1-209ENST00000519100 MS4A3Q96HJ5 214 aa9.62□□□□□ -0.87
PABPC1-209ENST00000519100 CCDC61Q9Y6R9 512 aa9.62□□□□□ -0.87
PABPC1-209ENST00000519100 RASEFQ8IZ41 740 aa9.61□□□□□ -0.87
PABPC1-209ENST00000519100 PELP1Q8IZL8 1130 aaKnown RBP9.57□□□□□ -0.88
PABPC1-209ENST00000519100 KIF12Q96FN5 646 aa9.57□□□□□ -0.88
PABPC1-209ENST00000519100 KLHL34Q8N239 644 aa9.56□□□□□ -0.88
PABPC1-209ENST00000519100 ASTLQ6HA08 431 aaPredicted RBP9.55□□□□□ -0.88
PABPC1-209ENST00000519100 ATMINO43313 823 aaPredicted RBP9.54□□□□□ -0.88
PABPC1-209ENST00000519100 ZBTB47Q9UFB7 747 aaPredicted RBP9.54□□□□□ -0.88
PABPC1-209ENST00000519100 POTEB2H3BUK9 544 aa9.52□□□□□ -0.89
PABPC1-209ENST00000519100 SPOCK2Q92563 424 aa9.52□□□□□ -0.89
PABPC1-209ENST00000519100 MAP3K13O43283 966 aa9.51□□□□□ -0.89
PABPC1-209ENST00000519100 C7P10643 843 aa9.48□□□□□ -0.89
PABPC1-209ENST00000519100 SLC39A7Q92504 469 aa9.48□□□□□ -0.89
PABPC1-209ENST00000519100 METRNQ9UJH8 293 aa9.48□□□□□ -0.89
PABPC1-209ENST00000519100 ATN1P54259 1190 aaPredicted RBP9.47□□□□□ -0.89
PABPC1-209ENST00000519100 OTUD5Q96G74 571 aa9.47□□□□□ -0.89
PABPC1-209ENST00000519100 TRPC6Q9Y210 931 aa9.47□□□□□ -0.89
PABPC1-209ENST00000519100 BMP2KQ9NSY1 1161 aaPredicted RBP9.45□□□□□ -0.9
PABPC1-209ENST00000519100 FAM212AQ96EL1 285 aa9.43□□□□□ -0.9
PABPC1-209ENST00000519100 TIE1P35590 1138 aa9.42□□□□□ -0.9
PABPC1-209ENST00000519100 SGIP1Q9BQI5 828 aa9.42□□□□□ -0.9
PABPC1-209ENST00000519100 DCAF8Q5TAQ9 597 aa9.41□□□□□ -0.9
PABPC1-209ENST00000519100 PCDHB13Q9Y5F0 798 aa9.41□□□□□ -0.9
PABPC1-209ENST00000519100 PKD2Q13563 968 aa9.39□□□□□ -0.91
PABPC1-209ENST00000519100 TTLL13PA6NNM8 815 aa9.38□□□□□ -0.91
PABPC1-209ENST00000519100 POTEJP0CG39 1038 aa9.38□□□□□ -0.91
PABPC1-209ENST00000519100 PYGBP11216 843 aa9.37□□□□□ -0.91
PABPC1-209ENST00000519100 IFNL1Q8IU54 200 aa9.37□□□□□ -0.91
PABPC1-209ENST00000519100 CIZ1Q9ULV3 898 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-209ENST00000519100 GSE1Q14687 1217 aa9.36□□□□□ -0.91
PABPC1-209ENST00000519100 POTEFA5A3E0 1075 aa9.35□□□□□ -0.91
PABPC1-209ENST00000519100 MAMSTRQ6ZN01 415 aa9.33□□□□□ -0.92
PABPC1-209ENST00000519100 RNF25Q96BH1 459 aaPredicted RBP9.32□□□□□ -0.92
PABPC1-209ENST00000519100 TRIM35Q9UPQ4 493 aa9.32□□□□□ -0.92
PABPC1-209ENST00000519100 SEC24BO95487 1268 aa9.3□□□□□ -0.92
PABPC1-209ENST00000519100 TMEM106CQ9BVX2 250 aa9.3□□□□□ -0.92
PABPC1-209ENST00000519100 COLQQ9Y215 455 aaPredicted RBP9.3□□□□□ -0.92
PABPC1-209ENST00000519100 CHRM1P11229 460 aaPredicted RBP9.29□□□□□ -0.92
PABPC1-209ENST00000519100 IER5LQ5T953 404 aa9.29□□□□□ -0.92
PABPC1-209ENST00000519100 RTN4Q9NQC3 1192 aaKnown RBP9.29□□□□□ -0.92
PABPC1-209ENST00000519100 SCUBE2Q9NQ36 999 aa9.28□□□□□ -0.92
PABPC1-209ENST00000519100 PCDHB8Q9UN66 801 aa9.27□□□□□ -0.93
PABPC1-209ENST00000519100 RGL2O15211 777 aa9.24□□□□□ -0.93
PABPC1-209ENST00000519100 ECM2O94769 699 aaPredicted RBP9.24□□□□□ -0.93
PABPC1-209ENST00000519100 TRIM41Q8WV44 630 aa9.22□□□□□ -0.93
PABPC1-209ENST00000519100 POTEMA6NI47 508 aa9.2□□□□□ -0.94
PABPC1-209ENST00000519100 PLCG2P16885 1265 aa9.19□□□□□ -0.94
PABPC1-209ENST00000519100 IRX5P78411 483 aaPredicted RBP9.18□□□□□ -0.94
PABPC1-209ENST00000519100 AMER1Q5JTC6 1135 aaPredicted RBP9.18□□□□□ -0.94
PABPC1-209ENST00000519100 POTEGQ6S5H5 508 aa9.18□□□□□ -0.94
PABPC1-209ENST00000519100 ZNF467Q7Z7K2 595 aaPredicted RBP9.17□□□□□ -0.94
PABPC1-209ENST00000519100 FAM163AQ96GL9 167 aaPredicted RBP9.16□□□□□ -0.94
PABPC1-209ENST00000519100 RIOK3O14730 519 aaKnown RBP9.15□□□□□ -0.94
PABPC1-209ENST00000519100 LCE2DQ5TA82 110 aaPredicted RBP9.14□□□□□ -0.95
PABPC1-209ENST00000519100 OCEL1Q9H607 264 aa9.14□□□□□ -0.95
PABPC1-209ENST00000519100 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.12□□□□□ -0.95
PABPC1-209ENST00000519100 PSEN1P49768 467 aa9.12□□□□□ -0.95
PABPC1-209ENST00000519100 ZFP91Q96JP5 570 aaPredicted RBP9.12□□□□□ -0.95
PABPC1-209ENST00000519100 PLSCR2Q9NRY7 297 aa9.12□□□□□ -0.95
PABPC1-209ENST00000519100 PDAP1Q13442 181 aaKnown RBP9.1□□□□□ -0.95
PABPC1-209ENST00000519100 SLAIN1Q8ND83 568 aa9.1□□□□□ -0.95
PABPC1-209ENST00000519100 VGFO15240 615 aaPredicted RBP9.09□□□□□ -0.95
PABPC1-209ENST00000519100 GOLGA2Q08379 1002 aa9.08□□□□□ -0.96
PABPC1-209ENST00000519100 MKRN3Q13064 507 aaKnown RBP9.07□□□□□ -0.96
PABPC1-209ENST00000519100 PDCD7Q8N8D1 485 aaKnown RBP9.05□□□□□ -0.96
PABPC1-209ENST00000519100 PCDH10Q9P2E7 1040 aa9.04□□□□□ -0.96
PABPC1-209ENST00000519100 BCL11BQ9C0K0 894 aaPredicted RBP9.03□□□□□ -0.96
PABPC1-209ENST00000519100 CABP2Q9NPB3 220 aa9.02□□□□□ -0.97
PABPC1-209ENST00000519100 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.02□□□□□ -0.976e-20■□□□□ 10.8
PABPC1-209ENST00000519100 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.02□□□□□ -0.97
PABPC1-209ENST00000519100 HS6ST3Q8IZP7 471 aa9□□□□□ -0.97
PABPC1-209ENST00000519100 STK25O00506 426 aa8.99□□□□□ -0.97
PABPC1-209ENST00000519100 ST18O60284 1047 aa8.99□□□□□ -0.97
PABPC1-209ENST00000519100 EFCAB3Q8N7B9 438 aa8.99□□□□□ -0.97
PABPC1-209ENST00000519100 L3MBTL3Q96JM7 780 aaPredicted RBP8.99□□□□□ -0.97
PABPC1-209ENST00000519100 STK24Q9Y6E0 443 aa8.99□□□□□ -0.97
PABPC1-209ENST00000519100 ILDR1Q86SU0 546 aaPredicted RBP8.97□□□□□ -0.97
PABPC1-209ENST00000519100 CHGAP10645 457 aaKnown RBP8.96□□□□□ -0.98
PABPC1-209ENST00000519100 NKX1-1Q15270 411 aaPredicted RBP8.96□□□□□ -0.98
PABPC1-209ENST00000519100 C3orf67Q6ZVT6 689 aa8.96□□□□□ -0.98
PABPC1-209ENST00000519100 DPY19L2Q6NUT2 758 aa8.95□□□□□ -0.98
PABPC1-209ENST00000519100 SNPHO15079 494 aa8.94□□□□□ -0.98
PABPC1-209ENST00000519100 DCAF8L2P0C7V8 631 aa8.94□□□□□ -0.98
PABPC1-209ENST00000519100 MS4A4AQ96JQ5 239 aa8.93□□□□□ -0.98
PABPC1-209ENST00000519100 MFRPQ9BY79 579 aa8.93□□□□□ -0.98
PABPC1-209ENST00000519100 DNAJC5Q9H3Z4 198 aa8.93□□□□□ -0.98
PABPC1-209ENST00000519100 TAOK2Q9UL54 1235 aa8.93□□□□□ -0.98
PABPC1-209ENST00000519100 PHF8Q9UPP1 1060 aa8.92□□□□□ -0.98
PABPC1-209ENST00000519100 CDAN1Q8IWY9 1227 aa8.91□□□□□ -0.98
PABPC1-209ENST00000519100 FBXO22Q8NEZ5 403 aa8.91□□□□□ -0.98
PABPC1-209ENST00000519100 TMEM121BQ9BXQ6 578 aaPredicted RBP8.89□□□□□ -0.99
PABPC1-209ENST00000519100 BOLA1Q9Y3E2 137 aa8.88□□□□□ -0.99
PABPC1-209ENST00000519100 G3V3G9 751 aa8.87□□□□□ -0.99
PABPC1-209ENST00000519100 SOX12O15370 315 aa8.86□□□□□ -0.99
PABPC1-209ENST00000519100 MARVELD3Q96A59 401 aa8.85□□□□□ -0.99
PABPC1-209ENST00000519100 PPP1R37O75864 691 aa8.83□□□□□ -1
PABPC1-209ENST00000519100 GTPBP6O43824 516 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms