RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 CD44P16070 742 aaKnown RBP14.46□□□□□ -0.09
SQLE-203ENST00000518931 C19orf67A6NJJ6 358 aa14.43□□□□□ -0.1
SQLE-203ENST00000518931 HAX1O00165 279 aa14.43□□□□□ -0.1
SQLE-203ENST00000518931 ZRANB1Q9UGI0 708 aa14.42□□□□□ -0.1
SQLE-203ENST00000518931 TRIM41Q8WV44 630 aa14.41□□□□□ -0.1
SQLE-203ENST00000518931 PYGBP11216 843 aa14.39□□□□□ -0.11
SQLE-203ENST00000518931 CCDC61Q9Y6R9 512 aa14.38□□□□□ -0.11
SQLE-203ENST00000518931 CHRM1P11229 460 aaPredicted RBP14.34□□□□□ -0.11
SQLE-203ENST00000518931 EVX2Q03828 476 aa14.32□□□□□ -0.12
SQLE-203ENST00000518931 RGL2O15211 777 aa14.31□□□□□ -0.12
SQLE-203ENST00000518931 DCAF8L2P0C7V8 631 aa14.28□□□□□ -0.12
SQLE-203ENST00000518931 PHF12Q96QT6 1004 aa14.28□□□□□ -0.12
SQLE-203ENST00000518931 ZNF579Q8NAF0 562 aaKnown RBP14.25□□□□□ -0.13
SQLE-203ENST00000518931 KIF12Q96FN5 646 aa14.25□□□□□ -0.13
SQLE-203ENST00000518931 RNF25Q96BH1 459 aaPredicted RBP14.24□□□□□ -0.13
SQLE-203ENST00000518931 MAP3K13O43283 966 aa14.23□□□□□ -0.13
SQLE-203ENST00000518931 RIOK3O14730 519 aaKnown RBP14.2□□□□□ -0.14
SQLE-203ENST00000518931 PCDHB13Q9Y5F0 798 aa14.2□□□□□ -0.14
SQLE-203ENST00000518931 PCDHB8Q9UN66 801 aa14.18□□□□□ -0.14
SQLE-203ENST00000518931 SGIP1Q9BQI5 828 aa14.17□□□□□ -0.14
SQLE-203ENST00000518931 ZNF467Q7Z7K2 595 aaPredicted RBP14.16□□□□□ -0.14
SQLE-203ENST00000518931 IFNL1Q8IU54 200 aa14.14□□□□□ -0.15
SQLE-203ENST00000518931 TAOK2Q9UL54 1235 aa14.12□□□□□ -0.15
SQLE-203ENST00000518931 VGFO15240 615 aaPredicted RBP14.1□□□□□ -0.15
SQLE-203ENST00000518931 MS4A3Q96HJ5 214 aa14.1□□□□□ -0.15
SQLE-203ENST00000518931 CHGAP10645 457 aaKnown RBP14.07□□□□□ -0.16
SQLE-203ENST00000518931 CLCN6P51797 869 aa14.07□□□□□ -0.16
SQLE-203ENST00000518931 GALR2O43603 387 aaPredicted RBP14.05□□□□□ -0.16
SQLE-203ENST00000518931 PDAP1Q13442 181 aaKnown RBP14.05□□□□□ -0.16
SQLE-203ENST00000518931 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.04□□□□□ -0.16
SQLE-203ENST00000518931 ZFP91Q96JP5 570 aaPredicted RBP14.04□□□□□ -0.16
SQLE-203ENST00000518931 GABBR2O75899 941 aa14.03□□□□□ -0.16
SQLE-203ENST00000518931 PSEN1P49768 467 aa14.03□□□□□ -0.16
SQLE-203ENST00000518931 TRPC6Q9Y210 931 aa14.02□□□□□ -0.17
SQLE-203ENST00000518931 STK25O00506 426 aa14.01□□□□□ -0.17
SQLE-203ENST00000518931 SP7Q8TDD2 431 aaPredicted RBP13.99□□□□□ -0.17
SQLE-203ENST00000518931 HS6ST3Q8IZP7 471 aa13.98□□□□□ -0.17
SQLE-203ENST00000518931 BCL11BQ9C0K0 894 aaPredicted RBP13.97□□□□□ -0.17
SQLE-203ENST00000518931 STK24Q9Y6E0 443 aa13.97□□□□□ -0.17
SQLE-203ENST00000518931 TMEM106CQ9BVX2 250 aa13.93□□□□□ -0.18
SQLE-203ENST00000518931 TIE1P35590 1138 aa13.91□□□□□ -0.18
SQLE-203ENST00000518931 BBXQ8WY36 941 aaPredicted RBP13.9□□□□□ -0.18
SQLE-203ENST00000518931 BMP2KQ9NSY1 1161 aaPredicted RBP13.89□□□□□ -0.19
SQLE-203ENST00000518931 TTLL13PA6NNM8 815 aa13.87□□□□□ -0.19
SQLE-203ENST00000518931 CABP2Q9NPB3 220 aa13.87□□□□□ -0.19
SQLE-203ENST00000518931 DCBLD2Q96PD2 775 aa13.85□□□□□ -0.19
SQLE-203ENST00000518931 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.85□□□□□ -0.19
SQLE-203ENST00000518931 DNAJC5Q9H3Z4 198 aa13.83□□□□□ -0.2
SQLE-203ENST00000518931 ATMINO43313 823 aaPredicted RBP13.81□□□□□ -0.2
SQLE-203ENST00000518931 ATN1P54259 1190 aaPredicted RBP13.81□□□□□ -0.2
SQLE-203ENST00000518931 GOLGA2Q08379 1002 aa13.81□□□□□ -0.2
SQLE-203ENST00000518931 NKX1-1Q15270 411 aaPredicted RBP13.8□□□□□ -0.2
SQLE-203ENST00000518931 ASTLQ6HA08 431 aaPredicted RBP13.8□□□□□ -0.2
SQLE-203ENST00000518931 EFCAB3Q8N7B9 438 aa13.8□□□□□ -0.2
SQLE-203ENST00000518931 TRIM35Q9UPQ4 493 aa13.79□□□□□ -0.2
SQLE-203ENST00000518931 PAXIP1Q6ZW49 1069 aaPredicted RBP13.76□□□□□ -0.21
SQLE-203ENST00000518931 MKRN3Q13064 507 aaKnown RBP13.75□□□□□ -0.21
SQLE-203ENST00000518931 CFAP44Q96MT7 982 aa13.74□□□□□ -0.21
SQLE-203ENST00000518931 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
SQLE-203ENST00000518931 SPRYD3Q8NCJ5 442 aa13.73□□□□□ -0.21
SQLE-203ENST00000518931 SOX12O15370 315 aa13.72□□□□□ -0.21
SQLE-203ENST00000518931 PELP1Q8IZL8 1130 aaKnown RBP13.72□□□□□ -0.21
SQLE-203ENST00000518931 PLCB2Q00722 1185 aa13.71□□□□□ -0.21
SQLE-203ENST00000518931 GTPBP6O43824 516 aaPredicted RBP13.69□□□□□ -0.22
SQLE-203ENST00000518931 MFRPQ9BY79 579 aa13.69□□□□□ -0.22
SQLE-203ENST00000518931 PHF8Q9UPP1 1060 aa13.69□□□□□ -0.22
SQLE-203ENST00000518931 NLRP6P59044 892 aa13.67□□□□□ -0.22
SQLE-203ENST00000518931 RYDENQ9NUL5 291 aaKnown RBP13.65□□□□□ -0.22
SQLE-203ENST00000518931 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.65□□□□□ -0.222e-10■□□□□ 8.9
SQLE-203ENST00000518931 FBXO22Q8NEZ5 403 aa13.63□□□□□ -0.23
SQLE-203ENST00000518931 IER5LQ5T953 404 aa13.62□□□□□ -0.23
SQLE-203ENST00000518931 SLC39A7Q92504 469 aa13.6□□□□□ -0.23
SQLE-203ENST00000518931 C7P10643 843 aa13.58□□□□□ -0.24
SQLE-203ENST00000518931 IRX5P78411 483 aaPredicted RBP13.58□□□□□ -0.24
SQLE-203ENST00000518931 MS4A4AQ96JQ5 239 aa13.58□□□□□ -0.24
SQLE-203ENST00000518931 SEC24BO95487 1268 aa13.57□□□□□ -0.24
SQLE-203ENST00000518931 ILDR1Q86SU0 546 aaPredicted RBP13.57□□□□□ -0.24
SQLE-203ENST00000518931 OCEL1Q9H607 264 aa13.57□□□□□ -0.24
SQLE-203ENST00000518931 METRNQ9UJH8 293 aa13.56□□□□□ -0.24
SQLE-203ENST00000518931 PPP1R37O75864 691 aa13.54□□□□□ -0.24
SQLE-203ENST00000518931 PLCG2P16885 1265 aa13.54□□□□□ -0.24
SQLE-203ENST00000518931 HAP1P54257 671 aaPredicted RBP13.54□□□□□ -0.24
SQLE-203ENST00000518931 DPY19L2Q6NUT2 758 aa13.54□□□□□ -0.24
SQLE-203ENST00000518931 COLQQ9Y215 455 aaPredicted RBP13.54□□□□□ -0.24
SQLE-203ENST00000518931 PDCD7Q8N8D1 485 aaKnown RBP13.53□□□□□ -0.24
SQLE-203ENST00000518931 POTEFA5A3E0 1075 aa13.5□□□□□ -0.25
SQLE-203ENST00000518931 TSHZ2Q9NRE2 1034 aa13.49□□□□□ -0.25
SQLE-203ENST00000518931 SLC24A1O60721 1099 aa13.46□□□□□ -0.25
SQLE-203ENST00000518931 L3MBTL3Q96JM7 780 aaPredicted RBP13.41□□□□□ -0.26
SQLE-203ENST00000518931 G3V3G9 751 aa13.39□□□□□ -0.27
SQLE-203ENST00000518931 BOLA1Q9Y3E2 137 aa13.39□□□□□ -0.27
SQLE-203ENST00000518931 MICALL2Q8IY33 904 aa13.36□□□□□ -0.27
SQLE-203ENST00000518931 CADPS2Q86UW7 1296 aa13.34□□□□□ -0.27
SQLE-203ENST00000518931 TMEM121BQ9BXQ6 578 aaPredicted RBP13.33□□□□□ -0.28
SQLE-203ENST00000518931 POTEB2H3BUK9 544 aa13.31□□□□□ -0.28
SQLE-203ENST00000518931 VSIG10Q8N0Z9 540 aa13.3□□□□□ -0.28
SQLE-203ENST00000518931 KDM2AQ9Y2K7 1162 aa13.28□□□□□ -0.28
SQLE-203ENST00000518931 POTEJP0CG39 1038 aa13.26□□□□□ -0.29
SQLE-203ENST00000518931 PDE4AP27815 886 aa13.23□□□□□ -0.29
SQLE-203ENST00000518931 C3orf67Q6ZVT6 689 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms