RNA–Protein interactions for RNA: ENST00000518426.1

CLVS1-202, Transcript of clavesin 1, humanhuman

TSL 4

Gene CLVS1, Length 312 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-202ENST00000518426 PABPN1Q86U42 306 aaKnown RBP eCLIP7.82□□□□□ -1.16
CLVS1-202ENST00000518426 PCDH10Q9P2E7 1040 aa7.81□□□□□ -1.16
CLVS1-202ENST00000518426 ZNF579Q8NAF0 562 aaKnown RBP7.8□□□□□ -1.16
CLVS1-202ENST00000518426 POTEB2H3BUK9 544 aa7.79□□□□□ -1.16
CLVS1-202ENST00000518426 ECM2O94769 699 aaPredicted RBP7.79□□□□□ -1.16
CLVS1-202ENST00000518426 ZRANB1Q9UGI0 708 aa7.78□□□□□ -1.16
CLVS1-202ENST00000518426 STAG3Q9UJ98 1225 aa7.78□□□□□ -1.16
CLVS1-202ENST00000518426 PLCD3Q8N3E9 789 aa7.77□□□□□ -1.17
CLVS1-202ENST00000518426 GALR2O43603 387 aaPredicted RBP7.75□□□□□ -1.17
CLVS1-202ENST00000518426 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.75□□□□□ -1.17
CLVS1-202ENST00000518426 VSIG10Q8N0Z9 540 aa7.74□□□□□ -1.17
CLVS1-202ENST00000518426 BBXQ8WY36 941 aaPredicted RBP7.73□□□□□ -1.17
CLVS1-202ENST00000518426 BCANQ96GW7 911 aa7.73□□□□□ -1.17
CLVS1-202ENST00000518426 MIER1Q8N108 512 aa7.72□□□□□ -1.17
CLVS1-202ENST00000518426 NPM1P06748 294 aaKnown RBP eCLIP7.71□□□□□ -1.18
CLVS1-202ENST00000518426 PAXIP1Q6ZW49 1069 aaPredicted RBP7.71□□□□□ -1.18
CLVS1-202ENST00000518426 CFAP44Q96MT7 982 aa7.71□□□□□ -1.18
CLVS1-202ENST00000518426 RGL2O15211 777 aa7.7□□□□□ -1.18
CLVS1-202ENST00000518426 CIZ1Q9ULV3 898 aaPredicted RBP7.66□□□□□ -1.18
CLVS1-202ENST00000518426 PRKCSHP14314 528 aaPredicted RBP7.65□□□□□ -1.18
CLVS1-202ENST00000518426 PLEKHG5O94827 1062 aa7.64□□□□□ -1.19
CLVS1-202ENST00000518426 KDM2AQ9Y2K7 1162 aa7.64□□□□□ -1.19
CLVS1-202ENST00000518426 PELP1Q8IZL8 1130 aaKnown RBP7.63□□□□□ -1.19
CLVS1-202ENST00000518426 TAOK2Q9UL54 1235 aa7.63□□□□□ -1.19
CLVS1-202ENST00000518426 SPRYD3Q8NCJ5 442 aa7.62□□□□□ -1.19
CLVS1-202ENST00000518426 ZBTB47Q9UFB7 747 aaPredicted RBP7.62□□□□□ -1.19
CLVS1-202ENST00000518426 PAK3O75914 559 aaPredicted RBP7.61□□□□□ -1.19
CLVS1-202ENST00000518426 CHGAP10645 457 aaKnown RBP7.61□□□□□ -1.19
CLVS1-202ENST00000518426 FAM163AQ96GL9 167 aaPredicted RBP7.61□□□□□ -1.19
CLVS1-202ENST00000518426 PHF12Q96QT6 1004 aa7.61□□□□□ -1.19
CLVS1-202ENST00000518426 LCE2DQ5TA82 110 aaPredicted RBP7.6□□□□□ -1.19
CLVS1-202ENST00000518426 MAMSTRQ6ZN01 415 aa7.6□□□□□ -1.19
CLVS1-202ENST00000518426 CREBZFQ9NS37 354 aa7.6□□□□□ -1.19
CLVS1-202ENST00000518426 METRNQ9UJH8 293 aa7.6□□□□□ -1.19
CLVS1-202ENST00000518426 POTEJP0CG39 1038 aa7.58□□□□□ -1.2
CLVS1-202ENST00000518426 TSHZ2Q9NRE2 1034 aa7.58□□□□□ -1.2
CLVS1-202ENST00000518426 SLC39A7Q92504 469 aa7.57□□□□□ -1.2
CLVS1-202ENST00000518426 C7P10643 843 aa7.55□□□□□ -1.2
CLVS1-202ENST00000518426 TPRNQ4KMQ1 711 aa7.55□□□□□ -1.2
CLVS1-202ENST00000518426 ASTLQ6HA08 431 aaPredicted RBP7.54□□□□□ -1.2
CLVS1-202ENST00000518426 TRIM41Q8WV44 630 aa7.54□□□□□ -1.2
CLVS1-202ENST00000518426 SCUBE2Q9NQ36 999 aa7.54□□□□□ -1.2
CLVS1-202ENST00000518426 ATMINO43313 823 aaPredicted RBP7.52□□□□□ -1.21
CLVS1-202ENST00000518426 HS6ST3Q8IZP7 471 aa7.5□□□□□ -1.21
CLVS1-202ENST00000518426 GSE1Q14687 1217 aa7.49□□□□□ -1.21
CLVS1-202ENST00000518426 CDAN1Q8IWY9 1227 aa7.49□□□□□ -1.21
CLVS1-202ENST00000518426 MS4A3Q96HJ5 214 aa7.49□□□□□ -1.21
CLVS1-202ENST00000518426 RNF25Q96BH1 459 aaPredicted RBP7.48□□□□□ -1.21
CLVS1-202ENST00000518426 NUBP1P53384 320 aa7.46□□□□□ -1.22
CLVS1-202ENST00000518426 DCAF8Q5TAQ9 597 aa7.46□□□□□ -1.22
CLVS1-202ENST00000518426 NBR1Q14596 966 aa7.43□□□□□ -1.22
CLVS1-202ENST00000518426 RIOK3O14730 519 aaKnown RBP7.42□□□□□ -1.22
CLVS1-202ENST00000518426 ATN1P54259 1190 aaPredicted RBP7.41□□□□□ -1.22
CLVS1-202ENST00000518426 FAM212AQ96EL1 285 aa7.41□□□□□ -1.22
CLVS1-202ENST00000518426 DNAJC5Q9H3Z4 198 aa7.41□□□□□ -1.22
CLVS1-202ENST00000518426 NKX1-1Q15270 411 aaPredicted RBP7.4□□□□□ -1.22
CLVS1-202ENST00000518426 STK25O00506 426 aa7.39□□□□□ -1.23
CLVS1-202ENST00000518426 POTEFA5A3E0 1075 aa7.38□□□□□ -1.23
CLVS1-202ENST00000518426 MNX1P50219 401 aaPredicted RBP7.38□□□□□ -1.23
CLVS1-202ENST00000518426 VGFO15240 615 aaPredicted RBP7.37□□□□□ -1.23
CLVS1-202ENST00000518426 GTPBP6O43824 516 aaPredicted RBP7.37□□□□□ -1.23
CLVS1-202ENST00000518426 MMRN1Q13201 1228 aa7.35□□□□□ -1.23
CLVS1-202ENST00000518426 RASEFQ8IZ41 740 aa7.34□□□□□ -1.23
CLVS1-202ENST00000518426 BMP2KQ9NSY1 1161 aaPredicted RBP7.33□□□□□ -1.24
CLVS1-202ENST00000518426 STK24Q9Y6E0 443 aa7.33□□□□□ -1.24
CLVS1-202ENST00000518426 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.32□□□□□ -1.24
CLVS1-202ENST00000518426 ZFP91Q96JP5 570 aaPredicted RBP7.32□□□□□ -1.24
CLVS1-202ENST00000518426 BCL11BQ9C0K0 894 aaPredicted RBP7.32□□□□□ -1.24
CLVS1-202ENST00000518426 PYGBP11216 843 aa7.31□□□□□ -1.24
CLVS1-202ENST00000518426 CHRM1P11229 460 aaPredicted RBP7.31□□□□□ -1.24
CLVS1-202ENST00000518426 SPNS2Q8IVW8 549 aa7.31□□□□□ -1.24
CLVS1-202ENST00000518426 TSPYL2Q9H2G4 693 aaPredicted RBP7.31□□□□□ -1.24
CLVS1-202ENST00000518426 ST18O60284 1047 aa7.3□□□□□ -1.24
CLVS1-202ENST00000518426 SEC24BO95487 1268 aa7.3□□□□□ -1.24
CLVS1-202ENST00000518426 SGIP1Q9BQI5 828 aa7.28□□□□□ -1.24
CLVS1-202ENST00000518426 TRPC6Q9Y210 931 aa7.28□□□□□ -1.24
CLVS1-202ENST00000518426 CCDC61Q9Y6R9 512 aa7.28□□□□□ -1.24
CLVS1-202ENST00000518426 TIE1P35590 1138 aa7.27□□□□□ -1.25
CLVS1-202ENST00000518426 KIF12Q96FN5 646 aa7.27□□□□□ -1.25
CLVS1-202ENST00000518426 RYDENQ9NUL5 291 aaKnown RBP7.27□□□□□ -1.25
CLVS1-202ENST00000518426 COLQQ9Y215 455 aaPredicted RBP7.27□□□□□ -1.25
CLVS1-202ENST00000518426 SLAIN1Q8ND83 568 aa7.26□□□□□ -1.25
CLVS1-202ENST00000518426 TTLL13PA6NNM8 815 aa7.21□□□□□ -1.26
CLVS1-202ENST00000518426 MAP3K13O43283 966 aa7.21□□□□□ -1.26
CLVS1-202ENST00000518426 IER5LQ5T953 404 aa7.19□□□□□ -1.26
CLVS1-202ENST00000518426 ZNF467Q7Z7K2 595 aaPredicted RBP7.19□□□□□ -1.26
CLVS1-202ENST00000518426 P3H3Q8IVL6 736 aa7.19□□□□□ -1.26
CLVS1-202ENST00000518426 TMEM121BQ9BXQ6 578 aaPredicted RBP7.19□□□□□ -1.26
CLVS1-202ENST00000518426 TRIM35Q9UPQ4 493 aa7.18□□□□□ -1.26
CLVS1-202ENST00000518426 WDR70Q9NW82 654 aa7.17□□□□□ -1.26
CLVS1-202ENST00000518426 PDAP1Q13442 181 aaKnown RBP7.16□□□□□ -1.26
CLVS1-202ENST00000518426 CADPS2Q86UW7 1296 aa7.15□□□□□ -1.26
CLVS1-202ENST00000518426 PCDHB8Q9UN66 801 aa7.15□□□□□ -1.26
CLVS1-202ENST00000518426 PCDHB13Q9Y5F0 798 aa7.15□□□□□ -1.26
CLVS1-202ENST00000518426 KCNV2Q8TDN2 545 aa7.14□□□□□ -1.27
CLVS1-202ENST00000518426 SNPHO15079 494 aa7.12□□□□□ -1.27
CLVS1-202ENST00000518426 PLCG2P16885 1265 aa7.12□□□□□ -1.27
CLVS1-202ENST00000518426 MARVELD3Q96A59 401 aa7.12□□□□□ -1.27
CLVS1-202ENST00000518426 PSEN1P49768 467 aa7.11□□□□□ -1.27
CLVS1-202ENST00000518426 MFRPQ9BY79 579 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms