RNA–Protein interactions for RNA: ENST00000517836.5

PCM1-205, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-205ENST00000517836 CCDC61Q9Y6R9 512 aa12.79□□□□□ -0.36
PCM1-205ENST00000517836 NUBP1P53384 320 aa12.77□□□□□ -0.37
PCM1-205ENST00000517836 AMER1Q5JTC6 1135 aaPredicted RBP12.77□□□□□ -0.37
PCM1-205ENST00000517836 MS4A3Q96HJ5 214 aa12.76□□□□□ -0.37
PCM1-205ENST00000517836 VASPP50552 380 aaPredicted RBP12.75□□□□□ -0.37
PCM1-205ENST00000517836 ZBTB47Q9UFB7 747 aaPredicted RBP12.72□□□□□ -0.37
PCM1-205ENST00000517836 KIF12Q96FN5 646 aa12.71□□□□□ -0.37
PCM1-205ENST00000517836 MAP3K13O43283 966 aa12.67□□□□□ -0.38
PCM1-205ENST00000517836 KLHL34Q8N239 644 aa12.66□□□□□ -0.38
PCM1-205ENST00000517836 PELP1Q8IZL8 1130 aaKnown RBP12.65□□□□□ -0.38
PCM1-205ENST00000517836 TRPC6Q9Y210 931 aa12.65□□□□□ -0.38
PCM1-205ENST00000517836 RTN4Q9NQC3 1192 aaKnown RBP12.64□□□□□ -0.39
PCM1-205ENST00000517836 PLSCR2Q9NRY7 297 aa12.62□□□□□ -0.39
PCM1-205ENST00000517836 DCAF8Q5TAQ9 597 aa12.61□□□□□ -0.39
PCM1-205ENST00000517836 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
PCM1-205ENST00000517836 IFNLR1Q8IU57 520 aaPredicted RBP12.59□□□□□ -0.39
PCM1-205ENST00000517836 ATMINO43313 823 aaPredicted RBP12.58□□□□□ -0.4
PCM1-205ENST00000517836 ASTLQ6HA08 431 aaPredicted RBP12.56□□□□□ -0.4
PCM1-205ENST00000517836 PCDHB13Q9Y5F0 798 aa12.55□□□□□ -0.4
PCM1-205ENST00000517836 PYGBP11216 843 aa12.54□□□□□ -0.4
PCM1-205ENST00000517836 ATN1P54259 1190 aaPredicted RBP12.54□□□□□ -0.4
PCM1-205ENST00000517836 BMP2KQ9NSY1 1161 aaPredicted RBP12.54□□□□□ -0.4
PCM1-205ENST00000517836 IFNL1Q8IU54 200 aa12.52□□□□□ -0.41
PCM1-205ENST00000517836 OTUD5Q96G74 571 aa12.52□□□□□ -0.41
PCM1-205ENST00000517836 POTEB2H3BUK9 544 aa12.5□□□□□ -0.41
PCM1-205ENST00000517836 METRNQ9UJH8 293 aa12.46□□□□□ -0.41
PCM1-205ENST00000517836 TTLL13PA6NNM8 815 aa12.45□□□□□ -0.42
PCM1-205ENST00000517836 TIE1P35590 1138 aa12.45□□□□□ -0.42
PCM1-205ENST00000517836 SPOCK2Q92563 424 aa12.45□□□□□ -0.42
PCM1-205ENST00000517836 SGIP1Q9BQI5 828 aa12.45□□□□□ -0.42
PCM1-205ENST00000517836 PCDHB8Q9UN66 801 aa12.44□□□□□ -0.42
PCM1-205ENST00000517836 GSE1Q14687 1217 aa12.41□□□□□ -0.42
PCM1-205ENST00000517836 SLC39A7Q92504 469 aa12.41□□□□□ -0.42
PCM1-205ENST00000517836 C7P10643 843 aa12.4□□□□□ -0.42
PCM1-205ENST00000517836 CIZ1Q9ULV3 898 aaPredicted RBP12.39□□□□□ -0.43
PCM1-205ENST00000517836 POTEMA6NI47 508 aa12.38□□□□□ -0.43
PCM1-205ENST00000517836 TMEM106CQ9BVX2 250 aa12.38□□□□□ -0.43
PCM1-205ENST00000517836 POTEFA5A3E0 1075 aa12.37□□□□□ -0.43
PCM1-205ENST00000517836 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
PCM1-205ENST00000517836 POTEJP0CG39 1038 aa12.36□□□□□ -0.43
PCM1-205ENST00000517836 POTEGQ6S5H5 508 aa12.33□□□□□ -0.44
PCM1-205ENST00000517836 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
PCM1-205ENST00000517836 CHRM1P11229 460 aaPredicted RBP12.29□□□□□ -0.44
PCM1-205ENST00000517836 SEC24BO95487 1268 aa12.26□□□□□ -0.45
PCM1-205ENST00000517836 PCDH10Q9P2E7 1040 aa12.26□□□□□ -0.45
PCM1-205ENST00000517836 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
PCM1-205ENST00000517836 PSEN1P49768 467 aa12.21□□□□□ -0.45
PCM1-205ENST00000517836 IER5LQ5T953 404 aa12.21□□□□□ -0.45
PCM1-205ENST00000517836 MAMSTRQ6ZN01 415 aa12.21□□□□□ -0.45
PCM1-205ENST00000517836 IRX5P78411 483 aaPredicted RBP12.17□□□□□ -0.46
PCM1-205ENST00000517836 PLCG2P16885 1265 aa12.14□□□□□ -0.47
PCM1-205ENST00000517836 PDAP1Q13442 181 aaKnown RBP12.14□□□□□ -0.47
PCM1-205ENST00000517836 LCE2DQ5TA82 110 aaPredicted RBP12.12□□□□□ -0.47
PCM1-205ENST00000517836 OCEL1Q9H607 264 aa12.11□□□□□ -0.47
PCM1-205ENST00000517836 SCUBE2Q9NQ36 999 aa12.11□□□□□ -0.47
PCM1-205ENST00000517836 PKD2Q13563 968 aa12.1□□□□□ -0.47
PCM1-205ENST00000517836 RNF25Q96BH1 459 aaPredicted RBP12.1□□□□□ -0.47
PCM1-205ENST00000517836 GOLGA2Q08379 1002 aa12.09□□□□□ -0.47
PCM1-205ENST00000517836 MKRN3Q13064 507 aaKnown RBP12.08□□□□□ -0.48
PCM1-205ENST00000517836 TRIM41Q8WV44 630 aa12.08□□□□□ -0.48
PCM1-205ENST00000517836 CABP2Q9NPB3 220 aa12.08□□□□□ -0.48
PCM1-205ENST00000517836 PDCD7Q8N8D1 485 aaKnown RBP12.05□□□□□ -0.48
PCM1-205ENST00000517836 FAM163AQ96GL9 167 aaPredicted RBP12.04□□□□□ -0.48
PCM1-205ENST00000517836 SLC24A1O60721 1099 aa12.03□□□□□ -0.48
PCM1-205ENST00000517836 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.03□□□□□ -0.484e-14■■■■■ 27.7
PCM1-205ENST00000517836 RIOK3O14730 519 aaKnown RBP12.02□□□□□ -0.49
PCM1-205ENST00000517836 ECM2O94769 699 aaPredicted RBP12□□□□□ -0.49
PCM1-205ENST00000517836 DPY19L2Q6NUT2 758 aa12□□□□□ -0.49
PCM1-205ENST00000517836 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.98□□□□□ -0.49
PCM1-205ENST00000517836 ZFP91Q96JP5 570 aaPredicted RBP11.98□□□□□ -0.49
PCM1-205ENST00000517836 EFCAB3Q8N7B9 438 aa11.97□□□□□ -0.49
PCM1-205ENST00000517836 SLAIN1Q8ND83 568 aa11.97□□□□□ -0.49
PCM1-205ENST00000517836 DCAF8L2P0C7V8 631 aa11.96□□□□□ -0.49
PCM1-205ENST00000517836 ILDR1Q86SU0 546 aaPredicted RBP11.94□□□□□ -0.5
PCM1-205ENST00000517836 VGFO15240 615 aaPredicted RBP11.93□□□□□ -0.5
PCM1-205ENST00000517836 RGL2O15211 777 aa11.9□□□□□ -0.5
PCM1-205ENST00000517836 L3MBTL3Q96JM7 780 aaPredicted RBP11.88□□□□□ -0.51
PCM1-205ENST00000517836 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.88□□□□□ -0.51
PCM1-205ENST00000517836 BCL11BQ9C0K0 894 aaPredicted RBP11.86□□□□□ -0.51
PCM1-205ENST00000517836 C3orf67Q6ZVT6 689 aa11.85□□□□□ -0.51
PCM1-205ENST00000517836 PHF8Q9UPP1 1060 aa11.83□□□□□ -0.52
PCM1-205ENST00000517836 STK24Q9Y6E0 443 aa11.83□□□□□ -0.52
PCM1-205ENST00000517836 CDAN1Q8IWY9 1227 aa11.82□□□□□ -0.52
PCM1-205ENST00000517836 MS4A4AQ96JQ5 239 aa11.82□□□□□ -0.52
PCM1-205ENST00000517836 BOLA1Q9Y3E2 137 aa11.82□□□□□ -0.52
PCM1-205ENST00000517836 STK25O00506 426 aa11.81□□□□□ -0.52
PCM1-205ENST00000517836 SOX12O15370 315 aa11.78□□□□□ -0.52
PCM1-205ENST00000517836 ST18O60284 1047 aa11.78□□□□□ -0.52
PCM1-205ENST00000517836 PLCB2Q00722 1185 aa11.77□□□□□ -0.53
PCM1-205ENST00000517836 G3V3G9 751 aa11.76□□□□□ -0.53
PCM1-205ENST00000517836 TAOK2Q9UL54 1235 aa11.76□□□□□ -0.53
PCM1-205ENST00000517836 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
PCM1-205ENST00000517836 TMEM121BQ9BXQ6 578 aaPredicted RBP11.73□□□□□ -0.53
PCM1-205ENST00000517836 MICALL2Q8IY33 904 aa11.72□□□□□ -0.53
PCM1-205ENST00000517836 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
PCM1-205ENST00000517836 MFRPQ9BY79 579 aa11.72□□□□□ -0.53
PCM1-205ENST00000517836 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.72□□□□□ -0.53
PCM1-205ENST00000517836 NLRP6P59044 892 aa11.69□□□□□ -0.54
PCM1-205ENST00000517836 TMEM92Q6UXU6 159 aa11.69□□□□□ -0.54
PCM1-205ENST00000517836 SNPHO15079 494 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms