RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 RASEFQ8IZ41 740 aa7.8□□□□□ -1.16
SKP1-203ENST00000517625 PIP4P2Q8N4L2 257 aa7.8□□□□□ -1.16
SKP1-203ENST00000517625 SLC24A1O60721 1099 aa7.79□□□□□ -1.16
SKP1-203ENST00000517625 RGL2O15211 777 aa7.78□□□□□ -1.16
SKP1-203ENST00000517625 PAK3O75914 559 aaPredicted RBP7.76□□□□□ -1.17
SKP1-203ENST00000517625 RIOK3O14730 519 aaKnown RBP7.74□□□□□ -1.17
SKP1-203ENST00000517625 BBXQ8WY36 941 aaPredicted RBP7.73□□□□□ -1.17
SKP1-203ENST00000517625 VGFO15240 615 aaPredicted RBP7.71□□□□□ -1.18
SKP1-203ENST00000517625 HS6ST3Q8IZP7 471 aa7.71□□□□□ -1.18
SKP1-203ENST00000517625 RNF25Q96BH1 459 aaPredicted RBP7.71□□□□□ -1.18
SKP1-203ENST00000517625 SGIP1Q9BQI5 828 aa7.71□□□□□ -1.18
SKP1-203ENST00000517625 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.71□□□□□ -1.18
SKP1-203ENST00000517625 PLCB2Q00722 1185 aa7.7□□□□□ -1.18
SKP1-203ENST00000517625 DNAJC5Q9H3Z4 198 aa7.7□□□□□ -1.18
SKP1-203ENST00000517625 ZNF467Q7Z7K2 595 aaPredicted RBP7.69□□□□□ -1.18
SKP1-203ENST00000517625 TSPYL2Q9H2G4 693 aaPredicted RBP7.69□□□□□ -1.18
SKP1-203ENST00000517625 CCDC61Q9Y6R9 512 aa7.69□□□□□ -1.18
SKP1-203ENST00000517625 PYGBP11216 843 aa7.68□□□□□ -1.18
SKP1-203ENST00000517625 CHGAP10645 457 aaKnown RBP7.66□□□□□ -1.18
SKP1-203ENST00000517625 CD44P16070 742 aaKnown RBP7.64□□□□□ -1.19
SKP1-203ENST00000517625 ZNF579Q8NAF0 562 aaKnown RBP7.64□□□□□ -1.19
SKP1-203ENST00000517625 C19orf67A6NJJ6 358 aa7.61□□□□□ -1.19
SKP1-203ENST00000517625 STK25O00506 426 aa7.61□□□□□ -1.19
SKP1-203ENST00000517625 PDAP1Q13442 181 aaKnown RBP7.61□□□□□ -1.19
SKP1-203ENST00000517625 RYDENQ9NUL5 291 aaKnown RBP7.6□□□□□ -1.19
SKP1-203ENST00000517625 ZRANB1Q9UGI0 708 aa7.6□□□□□ -1.19
SKP1-203ENST00000517625 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.59□□□□□ -1.19
SKP1-203ENST00000517625 SPRYD3Q8NCJ5 442 aa7.59□□□□□ -1.19
SKP1-203ENST00000517625 KIF12Q96FN5 646 aa7.59□□□□□ -1.19
SKP1-203ENST00000517625 ZFP91Q96JP5 570 aaPredicted RBP7.59□□□□□ -1.19
SKP1-203ENST00000517625 CLCN6P51797 869 aa7.58□□□□□ -1.2
SKP1-203ENST00000517625 PCDHB13Q9Y5F0 798 aa7.58□□□□□ -1.2
SKP1-203ENST00000517625 BCL11BQ9C0K0 894 aaPredicted RBP7.57□□□□□ -1.2
SKP1-203ENST00000517625 PAXIP1Q6ZW49 1069 aaPredicted RBP7.56□□□□□ -1.2
SKP1-203ENST00000517625 MAP3K13O43283 966 aa7.55□□□□□ -1.2
SKP1-203ENST00000517625 STK24Q9Y6E0 443 aa7.55□□□□□ -1.2
SKP1-203ENST00000517625 PSEN1P49768 467 aa7.54□□□□□ -1.2
SKP1-203ENST00000517625 HAP1P54257 671 aaPredicted RBP7.54□□□□□ -1.2
SKP1-203ENST00000517625 IFNL1Q8IU54 200 aa7.54□□□□□ -1.2
SKP1-203ENST00000517625 PCDHB8Q9UN66 801 aa7.54□□□□□ -1.2
SKP1-203ENST00000517625 CFAP44Q96MT7 982 aa7.53□□□□□ -1.2
SKP1-203ENST00000517625 VSIG10Q8N0Z9 540 aa7.52□□□□□ -1.21
SKP1-203ENST00000517625 PHF12Q96QT6 1004 aa7.52□□□□□ -1.21
SKP1-203ENST00000517625 NKX1-1Q15270 411 aaPredicted RBP7.5□□□□□ -1.21
SKP1-203ENST00000517625 HAX1O00165 279 aa7.49□□□□□ -1.21
SKP1-203ENST00000517625 GTPBP6O43824 516 aaPredicted RBP7.48□□□□□ -1.21
SKP1-203ENST00000517625 SOX12O15370 315 aa7.46□□□□□ -1.22
SKP1-203ENST00000517625 TIE1P35590 1138 aa7.46□□□□□ -1.22
SKP1-203ENST00000517625 MS4A3Q96HJ5 214 aa7.46□□□□□ -1.22
SKP1-203ENST00000517625 NLRP6P59044 892 aa7.42□□□□□ -1.22
SKP1-203ENST00000517625 GOLGA2Q08379 1002 aa7.42□□□□□ -1.22
SKP1-203ENST00000517625 TMEM106CQ9BVX2 250 aa7.42□□□□□ -1.22
SKP1-203ENST00000517625 CABP2Q9NPB3 220 aa7.42□□□□□ -1.22
SKP1-203ENST00000517625 MFRPQ9BY79 579 aa7.4□□□□□ -1.22
SKP1-203ENST00000517625 TSHZ2Q9NRE2 1034 aa7.4□□□□□ -1.22
SKP1-203ENST00000517625 EFCAB3Q8N7B9 438 aa7.39□□□□□ -1.23
SKP1-203ENST00000517625 TTLL13PA6NNM8 815 aa7.38□□□□□ -1.23
SKP1-203ENST00000517625 GALR2O43603 387 aaPredicted RBP7.37□□□□□ -1.23
SKP1-203ENST00000517625 MKRN3Q13064 507 aaKnown RBP7.37□□□□□ -1.23
SKP1-203ENST00000517625 FBXO22Q8NEZ5 403 aa7.37□□□□□ -1.23
SKP1-203ENST00000517625 BMP2KQ9NSY1 1161 aaPredicted RBP7.37□□□□□ -1.23
SKP1-203ENST00000517625 EVX2Q03828 476 aa7.36□□□□□ -1.23
SKP1-203ENST00000517625 TRPC6Q9Y210 931 aa7.36□□□□□ -1.23
SKP1-203ENST00000517625 ILDR1Q86SU0 546 aaPredicted RBP7.34□□□□□ -1.23
SKP1-203ENST00000517625 PHF8Q9UPP1 1060 aa7.34□□□□□ -1.23
SKP1-203ENST00000517625 KDM2AQ9Y2K7 1162 aa7.34□□□□□ -1.23
SKP1-203ENST00000517625 IER5LQ5T953 404 aa7.33□□□□□ -1.24
SKP1-203ENST00000517625 ASTLQ6HA08 431 aaPredicted RBP7.33□□□□□ -1.24
SKP1-203ENST00000517625 TRIM35Q9UPQ4 493 aa7.32□□□□□ -1.24
SKP1-203ENST00000517625 GABBR2O75899 941 aa7.31□□□□□ -1.24
SKP1-203ENST00000517625 ATMINO43313 823 aaPredicted RBP7.3□□□□□ -1.24
SKP1-203ENST00000517625 BCANQ96GW7 911 aa7.3□□□□□ -1.24
SKP1-203ENST00000517625 MS4A4AQ96JQ5 239 aa7.29□□□□□ -1.24
SKP1-203ENST00000517625 ATN1P54259 1190 aaPredicted RBP7.28□□□□□ -1.24
SKP1-203ENST00000517625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.28□□□□□ -1.243e-9■■□□□ 13.9
SKP1-203ENST00000517625 P3H3Q8IVL6 736 aa7.27□□□□□ -1.25
SKP1-203ENST00000517625 DCBLD2Q96PD2 775 aa7.27□□□□□ -1.25
SKP1-203ENST00000517625 PPP1R37O75864 691 aa7.26□□□□□ -1.25
SKP1-203ENST00000517625 IRX5P78411 483 aaPredicted RBP7.25□□□□□ -1.25
SKP1-203ENST00000517625 SP7Q8TDD2 431 aaPredicted RBP7.25□□□□□ -1.25
SKP1-203ENST00000517625 OCEL1Q9H607 264 aa7.24□□□□□ -1.25
SKP1-203ENST00000517625 WDR70Q9NW82 654 aa7.24□□□□□ -1.25
SKP1-203ENST00000517625 SLC39A7Q92504 469 aa7.23□□□□□ -1.25
SKP1-203ENST00000517625 PLCG2P16885 1265 aa7.22□□□□□ -1.25
SKP1-203ENST00000517625 CADPS2Q86UW7 1296 aa7.22□□□□□ -1.25
SKP1-203ENST00000517625 PDCD7Q8N8D1 485 aaKnown RBP7.22□□□□□ -1.25
SKP1-203ENST00000517625 C7P10643 843 aa7.21□□□□□ -1.26
SKP1-203ENST00000517625 PDE4AP27815 886 aa7.21□□□□□ -1.26
SKP1-203ENST00000517625 G3V3G9 751 aa7.2□□□□□ -1.26
SKP1-203ENST00000517625 L3MBTL3Q96JM7 780 aaPredicted RBP7.2□□□□□ -1.26
SKP1-203ENST00000517625 CRISPLD2Q9H0B8 497 aa7.2□□□□□ -1.26
SKP1-203ENST00000517625 NBR1Q14596 966 aa7.19□□□□□ -1.26
SKP1-203ENST00000517625 MFSD10Q14728 455 aa7.19□□□□□ -1.26
SKP1-203ENST00000517625 SEC24BO95487 1268 aa7.18□□□□□ -1.26
SKP1-203ENST00000517625 MICALL2Q8IY33 904 aa7.18□□□□□ -1.26
SKP1-203ENST00000517625 TMEM121BQ9BXQ6 578 aaPredicted RBP7.18□□□□□ -1.26
SKP1-203ENST00000517625 BOLA1Q9Y3E2 137 aa7.17□□□□□ -1.26
SKP1-203ENST00000517625 NCKAP5LQ9HCH0 1330 aa7.17□□□□□ -1.26
SKP1-203ENST00000517625 E2F4Q16254 413 aa7.15□□□□□ -1.26
SKP1-203ENST00000517625 PELP1Q8IZL8 1130 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms