RNA–Protein interactions for RNA: ENST00000517181.1

RNU1-54P-201, Transcript of RNA, U1 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU1-54P, Length 120 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-54P-201ENST00000517181 TSPYL2Q9H2G4 693 aaPredicted RBP8.85□□□□□ -0.99
RNU1-54P-201ENST00000517181 KLHL34Q8N239 644 aa8.82□□□□□ -1
RNU1-54P-201ENST00000517181 FAM212AQ96EL1 285 aa8.81□□□□□ -1
RNU1-54P-201ENST00000517181 KIF12Q96FN5 646 aa8.81□□□□□ -1
RNU1-54P-201ENST00000517181 GALR2O43603 387 aaPredicted RBP8.8□□□□□ -1
RNU1-54P-201ENST00000517181 SPOCK2Q92563 424 aa8.79□□□□□ -1
RNU1-54P-201ENST00000517181 POTEIP0CG38 1075 aa8.77□□□□□ -1.01
RNU1-54P-201ENST00000517181 MS4A3Q96HJ5 214 aa8.76□□□□□ -1.01
RNU1-54P-201ENST00000517181 MAP3K13O43283 966 aa8.74□□□□□ -1.01
RNU1-54P-201ENST00000517181 SGIP1Q9BQI5 828 aa8.74□□□□□ -1.01
RNU1-54P-201ENST00000517181 GSE1Q14687 1217 aa8.73□□□□□ -1.01
RNU1-54P-201ENST00000517181 DCAF8Q5TAQ9 597 aa8.72□□□□□ -1.01
RNU1-54P-201ENST00000517181 CHRM1P11229 460 aaPredicted RBP8.7□□□□□ -1.02
RNU1-54P-201ENST00000517181 ASTLQ6HA08 431 aaPredicted RBP8.69□□□□□ -1.02
RNU1-54P-201ENST00000517181 DCBLD2Q96PD2 775 aa8.68□□□□□ -1.02
RNU1-54P-201ENST00000517181 TRPC6Q9Y210 931 aa8.68□□□□□ -1.02
RNU1-54P-201ENST00000517181 PCDHB13Q9Y5F0 798 aa8.68□□□□□ -1.02
RNU1-54P-201ENST00000517181 PYGBP11216 843 aa8.67□□□□□ -1.02
RNU1-54P-201ENST00000517181 IFNL1Q8IU54 200 aa8.67□□□□□ -1.02
RNU1-54P-201ENST00000517181 ATMINO43313 823 aaPredicted RBP8.65□□□□□ -1.02
RNU1-54P-201ENST00000517181 TIE1P35590 1138 aa8.64□□□□□ -1.03
RNU1-54P-201ENST00000517181 BMP2KQ9NSY1 1161 aaPredicted RBP8.64□□□□□ -1.03
RNU1-54P-201ENST00000517181 PELP1Q8IZL8 1130 aaKnown RBP8.63□□□□□ -1.03
RNU1-54P-201ENST00000517181 CIZ1Q9ULV3 898 aaPredicted RBP8.62□□□□□ -1.03
RNU1-54P-201ENST00000517181 TRIM41Q8WV44 630 aa8.61□□□□□ -1.03
RNU1-54P-201ENST00000517181 TTLL13PA6NNM8 815 aa8.6□□□□□ -1.03
RNU1-54P-201ENST00000517181 ATN1P54259 1190 aaPredicted RBP8.6□□□□□ -1.03
RNU1-54P-201ENST00000517181 PCDHB8Q9UN66 801 aa8.6□□□□□ -1.03
RNU1-54P-201ENST00000517181 ZNF467Q7Z7K2 595 aaPredicted RBP8.58□□□□□ -1.04
RNU1-54P-201ENST00000517181 PKD2Q13563 968 aa8.55□□□□□ -1.04
RNU1-54P-201ENST00000517181 RNF25Q96BH1 459 aaPredicted RBP8.54□□□□□ -1.04
RNU1-54P-201ENST00000517181 TMEM106CQ9BVX2 250 aa8.54□□□□□ -1.04
RNU1-54P-201ENST00000517181 C7P10643 843 aa8.53□□□□□ -1.04
RNU1-54P-201ENST00000517181 SLC39A7Q92504 469 aa8.53□□□□□ -1.04
RNU1-54P-201ENST00000517181 METRNQ9UJH8 293 aa8.52□□□□□ -1.05
RNU1-54P-201ENST00000517181 TRIM35Q9UPQ4 493 aa8.52□□□□□ -1.05
RNU1-54P-201ENST00000517181 POTEFA5A3E0 1075 aa8.5□□□□□ -1.05
RNU1-54P-201ENST00000517181 PDAP1Q13442 181 aaKnown RBP8.5□□□□□ -1.05
RNU1-54P-201ENST00000517181 IER5LQ5T953 404 aa8.5□□□□□ -1.05
RNU1-54P-201ENST00000517181 LHX8Q68G74 356 aa8.5□□□□□ -1.05
RNU1-54P-201ENST00000517181 PSEN1P49768 467 aa8.49□□□□□ -1.05
RNU1-54P-201ENST00000517181 POTEB2H3BUK9 544 aa8.48□□□□□ -1.05
RNU1-54P-201ENST00000517181 RIOK3O14730 519 aaKnown RBP8.47□□□□□ -1.05
RNU1-54P-201ENST00000517181 ECM2O94769 699 aaPredicted RBP8.45□□□□□ -1.06
RNU1-54P-201ENST00000517181 COLQQ9Y215 455 aaPredicted RBP8.45□□□□□ -1.06
RNU1-54P-201ENST00000517181 POTEJP0CG39 1038 aa8.44□□□□□ -1.06
RNU1-54P-201ENST00000517181 IRX5P78411 483 aaPredicted RBP8.44□□□□□ -1.06
RNU1-54P-201ENST00000517181 VGFO15240 615 aaPredicted RBP8.42□□□□□ -1.06
RNU1-54P-201ENST00000517181 ILDR1Q86SU0 546 aaPredicted RBP8.42□□□□□ -1.06
RNU1-54P-201ENST00000517181 RGL2O15211 777 aa8.41□□□□□ -1.06
RNU1-54P-201ENST00000517181 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.39□□□□□ -1.07
RNU1-54P-201ENST00000517181 ZFP91Q96JP5 570 aaPredicted RBP8.39□□□□□ -1.07
RNU1-54P-201ENST00000517181 PDCD7Q8N8D1 485 aaKnown RBP8.38□□□□□ -1.07
RNU1-54P-201ENST00000517181 OTUD5Q96G74 571 aa8.38□□□□□ -1.07
RNU1-54P-201ENST00000517181 SEC24BO95487 1268 aa8.37□□□□□ -1.07
RNU1-54P-201ENST00000517181 OCEL1Q9H607 264 aa8.37□□□□□ -1.07
RNU1-54P-201ENST00000517181 CABP2Q9NPB3 220 aa8.37□□□□□ -1.07
RNU1-54P-201ENST00000517181 MKRN3Q13064 507 aaKnown RBP8.35□□□□□ -1.07
RNU1-54P-201ENST00000517181 TAOK2Q9UL54 1235 aa8.35□□□□□ -1.07
RNU1-54P-201ENST00000517181 PLCG2P16885 1265 aa8.34□□□□□ -1.07
RNU1-54P-201ENST00000517181 GOLGA2Q08379 1002 aa8.34□□□□□ -1.07
RNU1-54P-201ENST00000517181 EFCAB3Q8N7B9 438 aa8.33□□□□□ -1.08
RNU1-54P-201ENST00000517181 BCL11BQ9C0K0 894 aaPredicted RBP8.32□□□□□ -1.08
RNU1-54P-201ENST00000517181 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.32□□□□□ -1.08
RNU1-54P-201ENST00000517181 MAMSTRQ6ZN01 415 aa8.31□□□□□ -1.08
RNU1-54P-201ENST00000517181 STK25O00506 426 aa8.28□□□□□ -1.08
RNU1-54P-201ENST00000517181 SOX12O15370 315 aa8.28□□□□□ -1.08
RNU1-54P-201ENST00000517181 HS6ST3Q8IZP7 471 aa8.27□□□□□ -1.09
RNU1-54P-201ENST00000517181 STK24Q9Y6E0 443 aa8.27□□□□□ -1.09
RNU1-54P-201ENST00000517181 DPY19L2Q6NUT2 758 aa8.26□□□□□ -1.09
RNU1-54P-201ENST00000517181 MS4A4AQ96JQ5 239 aa8.26□□□□□ -1.09
RNU1-54P-201ENST00000517181 SCUBE2Q9NQ36 999 aa8.26□□□□□ -1.09
RNU1-54P-201ENST00000517181 FBXO22Q8NEZ5 403 aa8.25□□□□□ -1.09
RNU1-54P-201ENST00000517181 DNAJC5Q9H3Z4 198 aa8.25□□□□□ -1.09
RNU1-54P-201ENST00000517181 MFRPQ9BY79 579 aa8.24□□□□□ -1.09
RNU1-54P-201ENST00000517181 PHF8Q9UPP1 1060 aa8.24□□□□□ -1.09
RNU1-54P-201ENST00000517181 AMER1Q5JTC6 1135 aaPredicted RBP8.23□□□□□ -1.09
RNU1-54P-201ENST00000517181 L3MBTL3Q96JM7 780 aaPredicted RBP8.23□□□□□ -1.09
RNU1-54P-201ENST00000517181 TMEM121BQ9BXQ6 578 aaPredicted RBP8.23□□□□□ -1.09
RNU1-54P-201ENST00000517181 NLRP6P59044 892 aa8.2□□□□□ -1.1
RNU1-54P-201ENST00000517181 RTN4Q9NQC3 1192 aaKnown RBP8.2□□□□□ -1.1
RNU1-54P-201ENST00000517181 BOLA1Q9Y3E2 137 aa8.2□□□□□ -1.1
RNU1-54P-201ENST00000517181 CHGAP10645 457 aaKnown RBP8.18□□□□□ -1.1
RNU1-54P-201ENST00000517181 NKX1-1Q15270 411 aaPredicted RBP8.16□□□□□ -1.1
RNU1-54P-201ENST00000517181 MICALL2Q8IY33 904 aa8.16□□□□□ -1.1
RNU1-54P-201ENST00000517181 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.16□□□□□ -1.1
RNU1-54P-201ENST00000517181 C3orf67Q6ZVT6 689 aa8.15□□□□□ -1.1
RNU1-54P-201ENST00000517181 SLAIN1Q8ND83 568 aa8.15□□□□□ -1.1
RNU1-54P-201ENST00000517181 LCE2DQ5TA82 110 aaPredicted RBP8.13□□□□□ -1.11
RNU1-54P-201ENST00000517181 PPP1R37O75864 691 aa8.1□□□□□ -1.11
RNU1-54P-201ENST00000517181 TMEM92Q6UXU6 159 aa8.1□□□□□ -1.11
RNU1-54P-201ENST00000517181 G3V3G9 751 aa8.09□□□□□ -1.11
RNU1-54P-201ENST00000517181 KIF3CO14782 793 aa8.05□□□□□ -1.12
RNU1-54P-201ENST00000517181 GTPBP6O43824 516 aaPredicted RBP8.05□□□□□ -1.12
RNU1-54P-201ENST00000517181 DCAF8L2P0C7V8 631 aa8.04□□□□□ -1.12
RNU1-54P-201ENST00000517181 RYDENQ9NUL5 291 aaKnown RBP8.04□□□□□ -1.12
RNU1-54P-201ENST00000517181 SNPHO15079 494 aa8.03□□□□□ -1.12
RNU1-54P-201ENST00000517181 HOXB3P14651 431 aaPredicted RBP8.03□□□□□ -1.12
RNU1-54P-201ENST00000517181 ST18O60284 1047 aa8.02□□□□□ -1.13
RNU1-54P-201ENST00000517181 FAM163AQ96GL9 167 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms