RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 FAM212AQ96EL1 285 aa9.4□□□□□ -0.9
RNU6-1088P-201ENST00000516850 CCDC61Q9Y6R9 512 aa9.39□□□□□ -0.91
RNU6-1088P-201ENST00000516850 GALR2O43603 387 aaPredicted RBP9.38□□□□□ -0.91
RNU6-1088P-201ENST00000516850 NUBP1P53384 320 aa9.38□□□□□ -0.91
RNU6-1088P-201ENST00000516850 DCAF8Q5TAQ9 597 aa9.36□□□□□ -0.91
RNU6-1088P-201ENST00000516850 MS4A3Q96HJ5 214 aa9.33□□□□□ -0.92
RNU6-1088P-201ENST00000516850 KIF12Q96FN5 646 aa9.32□□□□□ -0.92
RNU6-1088P-201ENST00000516850 POTEIP0CG38 1075 aa9.3□□□□□ -0.92
RNU6-1088P-201ENST00000516850 MAP3K13O43283 966 aa9.29□□□□□ -0.92
RNU6-1088P-201ENST00000516850 GSE1Q14687 1217 aa9.29□□□□□ -0.92
RNU6-1088P-201ENST00000516850 IFNLR1Q8IU57 520 aaPredicted RBP9.28□□□□□ -0.92
RNU6-1088P-201ENST00000516850 SPOCK2Q92563 424 aa9.28□□□□□ -0.92
RNU6-1088P-201ENST00000516850 SGIP1Q9BQI5 828 aa9.27□□□□□ -0.93
RNU6-1088P-201ENST00000516850 PCDHB13Q9Y5F0 798 aa9.27□□□□□ -0.93
RNU6-1088P-201ENST00000516850 PYGBP11216 843 aa9.23□□□□□ -0.93
RNU6-1088P-201ENST00000516850 CIZ1Q9ULV3 898 aaPredicted RBP9.22□□□□□ -0.93
RNU6-1088P-201ENST00000516850 LHX8Q68G74 356 aa9.21□□□□□ -0.94
RNU6-1088P-201ENST00000516850 ATMINO43313 823 aaPredicted RBP9.2□□□□□ -0.94
RNU6-1088P-201ENST00000516850 TIE1P35590 1138 aa9.2□□□□□ -0.94
RNU6-1088P-201ENST00000516850 ASTLQ6HA08 431 aaPredicted RBP9.2□□□□□ -0.94
RNU6-1088P-201ENST00000516850 IFNL1Q8IU54 200 aa9.17□□□□□ -0.94
RNU6-1088P-201ENST00000516850 SLC39A7Q92504 469 aa9.17□□□□□ -0.94
RNU6-1088P-201ENST00000516850 BMP2KQ9NSY1 1161 aaPredicted RBP9.16□□□□□ -0.94
RNU6-1088P-201ENST00000516850 C7P10643 843 aa9.15□□□□□ -0.94
RNU6-1088P-201ENST00000516850 ATN1P54259 1190 aaPredicted RBP9.15□□□□□ -0.94
RNU6-1088P-201ENST00000516850 PELP1Q8IZL8 1130 aaKnown RBP9.15□□□□□ -0.94
RNU6-1088P-201ENST00000516850 TRPC6Q9Y210 931 aa9.15□□□□□ -0.94
RNU6-1088P-201ENST00000516850 CHRM1P11229 460 aaPredicted RBP9.13□□□□□ -0.95
RNU6-1088P-201ENST00000516850 ZNF467Q7Z7K2 595 aaPredicted RBP9.13□□□□□ -0.95
RNU6-1088P-201ENST00000516850 METRNQ9UJH8 293 aa9.13□□□□□ -0.95
RNU6-1088P-201ENST00000516850 TTLL13PA6NNM8 815 aa9.12□□□□□ -0.95
RNU6-1088P-201ENST00000516850 PCDHB8Q9UN66 801 aa9.12□□□□□ -0.95
RNU6-1088P-201ENST00000516850 TMEM106CQ9BVX2 250 aa9.11□□□□□ -0.95
RNU6-1088P-201ENST00000516850 TRIM41Q8WV44 630 aa9.1□□□□□ -0.95
RNU6-1088P-201ENST00000516850 TRIM35Q9UPQ4 493 aa9.09□□□□□ -0.95
RNU6-1088P-201ENST00000516850 SEC24BO95487 1268 aa9.08□□□□□ -0.96
RNU6-1088P-201ENST00000516850 GOLGA2Q08379 1002 aa9.05□□□□□ -0.96
RNU6-1088P-201ENST00000516850 IER5LQ5T953 404 aa9.04□□□□□ -0.96
RNU6-1088P-201ENST00000516850 PSEN1P49768 467 aa9.02□□□□□ -0.97
RNU6-1088P-201ENST00000516850 PDAP1Q13442 181 aaKnown RBP9.01□□□□□ -0.97
RNU6-1088P-201ENST00000516850 POTEB2H3BUK9 544 aa9□□□□□ -0.97
RNU6-1088P-201ENST00000516850 MAMSTRQ6ZN01 415 aa9□□□□□ -0.97
RNU6-1088P-201ENST00000516850 PLCG2P16885 1265 aa8.99□□□□□ -0.97
RNU6-1088P-201ENST00000516850 MKRN3Q13064 507 aaKnown RBP8.99□□□□□ -0.97
RNU6-1088P-201ENST00000516850 SCUBE2Q9NQ36 999 aa8.97□□□□□ -0.97
RNU6-1088P-201ENST00000516850 POTEFA5A3E0 1075 aa8.95□□□□□ -0.98
RNU6-1088P-201ENST00000516850 OTUD5Q96G74 571 aa8.95□□□□□ -0.98
RNU6-1088P-201ENST00000516850 COLQQ9Y215 455 aaPredicted RBP8.95□□□□□ -0.98
RNU6-1088P-201ENST00000516850 OCEL1Q9H607 264 aa8.94□□□□□ -0.98
RNU6-1088P-201ENST00000516850 TAOK2Q9UL54 1235 aa8.94□□□□□ -0.98
RNU6-1088P-201ENST00000516850 RIOK3O14730 519 aaKnown RBP8.93□□□□□ -0.98
RNU6-1088P-201ENST00000516850 ECM2O94769 699 aaPredicted RBP8.92□□□□□ -0.98
RNU6-1088P-201ENST00000516850 IRX5P78411 483 aaPredicted RBP8.92□□□□□ -0.98
RNU6-1088P-201ENST00000516850 CABP2Q9NPB3 220 aa8.92□□□□□ -0.98
RNU6-1088P-201ENST00000516850 VGFO15240 615 aaPredicted RBP8.89□□□□□ -0.99
RNU6-1088P-201ENST00000516850 POTEJP0CG39 1038 aa8.89□□□□□ -0.99
RNU6-1088P-201ENST00000516850 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.89□□□□□ -0.99
RNU6-1088P-201ENST00000516850 RNF25Q96BH1 459 aaPredicted RBP8.86□□□□□ -0.99
RNU6-1088P-201ENST00000516850 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.85□□□□□ -0.99
RNU6-1088P-201ENST00000516850 L3MBTL3Q96JM7 780 aaPredicted RBP8.85□□□□□ -0.99
RNU6-1088P-201ENST00000516850 ZFP91Q96JP5 570 aaPredicted RBP8.85□□□□□ -0.99
RNU6-1088P-201ENST00000516850 G3V3G9 751 aa8.84□□□□□ -0.99
RNU6-1088P-201ENST00000516850 PKD2Q13563 968 aa8.84□□□□□ -0.99
RNU6-1088P-201ENST00000516850 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.82□□□□□ -1
RNU6-1088P-201ENST00000516850 EFCAB3Q8N7B9 438 aa8.81□□□□□ -1
RNU6-1088P-201ENST00000516850 PDCD7Q8N8D1 485 aaKnown RBP8.8□□□□□ -1
RNU6-1088P-201ENST00000516850 SLAIN1Q8ND83 568 aa8.8□□□□□ -1
RNU6-1088P-201ENST00000516850 C3orf67Q6ZVT6 689 aa8.79□□□□□ -1
RNU6-1088P-201ENST00000516850 STK24Q9Y6E0 443 aa8.79□□□□□ -1
RNU6-1088P-201ENST00000516850 STK25O00506 426 aa8.78□□□□□ -1
RNU6-1088P-201ENST00000516850 RGL2O15211 777 aa8.78□□□□□ -1
RNU6-1088P-201ENST00000516850 SOX12O15370 315 aa8.78□□□□□ -1
RNU6-1088P-201ENST00000516850 BCL11BQ9C0K0 894 aaPredicted RBP8.78□□□□□ -1
RNU6-1088P-201ENST00000516850 ILDR1Q86SU0 546 aaPredicted RBP8.75□□□□□ -1.01
RNU6-1088P-201ENST00000516850 DPY19L2Q6NUT2 758 aa8.74□□□□□ -1.01
RNU6-1088P-201ENST00000516850 FAM163AQ96GL9 167 aaPredicted RBP8.74□□□□□ -1.01
RNU6-1088P-201ENST00000516850 BOLA1Q9Y3E2 137 aa8.74□□□□□ -1.01
RNU6-1088P-201ENST00000516850 NLRP6P59044 892 aa8.71□□□□□ -1.02
RNU6-1088P-201ENST00000516850 SNPHO15079 494 aa8.7□□□□□ -1.02
RNU6-1088P-201ENST00000516850 PHF8Q9UPP1 1060 aa8.7□□□□□ -1.02
RNU6-1088P-201ENST00000516850 POTEMA6NI47 508 aa8.65□□□□□ -1.02
RNU6-1088P-201ENST00000516850 CHGAP10645 457 aaKnown RBP8.63□□□□□ -1.03
RNU6-1088P-201ENST00000516850 POTEGQ6S5H5 508 aa8.63□□□□□ -1.03
RNU6-1088P-201ENST00000516850 MICALL2Q8IY33 904 aa8.63□□□□□ -1.03
RNU6-1088P-201ENST00000516850 MS4A4AQ96JQ5 239 aa8.63□□□□□ -1.03
RNU6-1088P-201ENST00000516850 DCAF8L2P0C7V8 631 aa8.62□□□□□ -1.03
RNU6-1088P-201ENST00000516850 TMEM121BQ9BXQ6 578 aaPredicted RBP8.62□□□□□ -1.03
RNU6-1088P-201ENST00000516850 MFRPQ9BY79 579 aa8.62□□□□□ -1.03
RNU6-1088P-201ENST00000516850 HS6ST3Q8IZP7 471 aa8.61□□□□□ -1.03
RNU6-1088P-201ENST00000516850 FBXO22Q8NEZ5 403 aa8.61□□□□□ -1.03
RNU6-1088P-201ENST00000516850 ST18O60284 1047 aa8.59□□□□□ -1.03
RNU6-1088P-201ENST00000516850 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
RNU6-1088P-201ENST00000516850 ZNF710Q8N1W2 664 aa8.55□□□□□ -1.04
RNU6-1088P-201ENST00000516850 PCDH10Q9P2E7 1040 aa8.55□□□□□ -1.04
RNU6-1088P-201ENST00000516850 DOK7Q18PE1 504 aa8.54□□□□□ -1.04
RNU6-1088P-201ENST00000516850 RYDENQ9NUL5 291 aaKnown RBP8.54□□□□□ -1.04
RNU6-1088P-201ENST00000516850 RIMBP2O15034 1052 aa8.53□□□□□ -1.04
RNU6-1088P-201ENST00000516850 AMER1Q5JTC6 1135 aaPredicted RBP8.5□□□□□ -1.05
RNU6-1088P-201ENST00000516850 TMEM92Q6UXU6 159 aa8.49□□□□□ -1.05
RNU6-1088P-201ENST00000516850 TMC2Q8TDI7 906 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms