RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 RYDENQ9NUL5 291 aaKnown RBP2.74□□□□□ -1.97
RN7SKP88-201ENST00000516847 RIOK3O14730 519 aaKnown RBP2.73□□□□□ -1.97
RN7SKP88-201ENST00000516847 SGIP1Q9BQI5 828 aa2.73□□□□□ -1.97
RN7SKP88-201ENST00000516847 VGFO15240 615 aaPredicted RBP2.72□□□□□ -1.97
RN7SKP88-201ENST00000516847 GTPBP6O43824 516 aaPredicted RBP2.72□□□□□ -1.97
RN7SKP88-201ENST00000516847 CHRM1P11229 460 aaPredicted RBP2.72□□□□□ -1.97
RN7SKP88-201ENST00000516847 NUBP1P53384 320 aa2.72□□□□□ -1.97
RN7SKP88-201ENST00000516847 NKX1-1Q15270 411 aaPredicted RBP2.71□□□□□ -1.98
RN7SKP88-201ENST00000516847 P3H3Q8IVL6 736 aa2.71□□□□□ -1.98
RN7SKP88-201ENST00000516847 FAM212AQ96EL1 285 aa2.71□□□□□ -1.98
RN7SKP88-201ENST00000516847 STK25O00506 426 aa2.69□□□□□ -1.98
RN7SKP88-201ENST00000516847 TMEM132AQ24JP5 1023 aa2.69□□□□□ -1.98
RN7SKP88-201ENST00000516847 SPDYE1Q8NFV5 336 aaPredicted RBP2.69□□□□□ -1.98
RN7SKP88-201ENST00000516847 MNX1P50219 401 aaPredicted RBP2.68□□□□□ -1.98
RN7SKP88-201ENST00000516847 DCAF8Q5TAQ9 597 aa2.68□□□□□ -1.98
RN7SKP88-201ENST00000516847 AKT1S1Q96B36 256 aa2.67□□□□□ -1.98
RN7SKP88-201ENST00000516847 ARXQ96QS3 562 aa2.67□□□□□ -1.98
RN7SKP88-201ENST00000516847 RBM42Q9BTD8 480 aaKnown RBP2.67□□□□□ -1.98
RN7SKP88-201ENST00000516847 BCL11BQ9C0K0 894 aaPredicted RBP2.67□□□□□ -1.98
RN7SKP88-201ENST00000516847 CREBZFQ9NS37 354 aa2.67□□□□□ -1.98
RN7SKP88-201ENST00000516847 TIMELESSQ9UNS1 1208 aa2.67□□□□□ -1.98
RN7SKP88-201ENST00000516847 GTF3C3Q9Y5Q9 886 aa2.67□□□□□ -1.98
RN7SKP88-201ENST00000516847 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP2.66□□□□□ -1.98
RN7SKP88-201ENST00000516847 TULP1O00294 542 aaPredicted RBP2.66□□□□□ -1.98
RN7SKP88-201ENST00000516847 ZFP91Q96JP5 570 aaPredicted RBP2.66□□□□□ -1.98
RN7SKP88-201ENST00000516847 STK24Q9Y6E0 443 aa2.66□□□□□ -1.98
RN7SKP88-201ENST00000516847 PRR29P0C7W0 189 aa2.65□□□□□ -1.99
RN7SKP88-201ENST00000516847 RASEFQ8IZ41 740 aa2.65□□□□□ -1.99
RN7SKP88-201ENST00000516847 ZNF467Q7Z7K2 595 aaPredicted RBP2.64□□□□□ -1.99
RN7SKP88-201ENST00000516847 POTEDQ86YR6 584 aa2.64□□□□□ -1.99
RN7SKP88-201ENST00000516847 LMOD2Q6P5Q4 547 aa2.63□□□□□ -1.99
RN7SKP88-201ENST00000516847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.63□□□□□ -1.99
RN7SKP88-201ENST00000516847 KCNV2Q8TDN2 545 aa2.63□□□□□ -1.99
RN7SKP88-201ENST00000516847 WDR70Q9NW82 654 aa2.63□□□□□ -1.99
RN7SKP88-201ENST00000516847 PYGBP11216 843 aa2.62□□□□□ -1.99
RN7SKP88-201ENST00000516847 PDAP1Q13442 181 aaKnown RBP2.62□□□□□ -1.99
RN7SKP88-201ENST00000516847 REM2Q8IYK8 340 aaPredicted RBP2.62□□□□□ -1.99
RN7SKP88-201ENST00000516847 ARHGEF1Q92888 912 aaKnown RBP2.62□□□□□ -1.99
RN7SKP88-201ENST00000516847 CLEC11AQ9Y240 323 aa2.61□□□□□ -1.99
RN7SKP88-201ENST00000516847 BRPF1P55201 1214 aaPredicted RBP2.6□□□□□ -1.99
RN7SKP88-201ENST00000516847 CACNB1Q02641 598 aaPredicted RBP2.6□□□□□ -1.99
RN7SKP88-201ENST00000516847 CADPS2Q86UW7 1296 aa2.6□□□□□ -1.99
RN7SKP88-201ENST00000516847 ZNF579Q8NAF0 562 aaKnown RBP2.6□□□□□ -1.99
RN7SKP88-201ENST00000516847 DAXXQ9UER7 740 aaPredicted RBP2.6□□□□□ -1.99
RN7SKP88-201ENST00000516847 TESPA1A2RU30 521 aaPredicted RBP2.59□□□□□ -1.99
RN7SKP88-201ENST00000516847 E2F4Q16254 413 aa2.59□□□□□ -1.99
RN7SKP88-201ENST00000516847 C14orf37Q86TY3 774 aa2.59□□□□□ -1.99
RN7SKP88-201ENST00000516847 HOMEZQ8IX15 550 aa2.59□□□□□ -1.99
RN7SKP88-201ENST00000516847 MFRPQ9BY79 579 aa2.59□□□□□ -1.99
RN7SKP88-201ENST00000516847 ARIH1Q9Y4X5 557 aaPredicted RBP2.59□□□□□ -1.99
RN7SKP88-201ENST00000516847 PITPNM1O00562 1244 aa2.58□□□□□ -2
RN7SKP88-201ENST00000516847 SOX12O15370 315 aa2.58□□□□□ -2
RN7SKP88-201ENST00000516847 PSEN1P49768 467 aa2.58□□□□□ -2
RN7SKP88-201ENST00000516847 NLRP6P59044 892 aa2.58□□□□□ -2
RN7SKP88-201ENST00000516847 SMYD5Q6GMV2 418 aa2.58□□□□□ -2
RN7SKP88-201ENST00000516847 FBXO22Q8NEZ5 403 aa2.58□□□□□ -2
RN7SKP88-201ENST00000516847 ZC3H15Q8WU90 426 aaKnown RBP2.58□□□□□ -2
RN7SKP88-201ENST00000516847 CCDC61Q9Y6R9 512 aa2.58□□□□□ -2
RN7SKP88-201ENST00000516847 ZMYND10O75800 440 aa2.57□□□□□ -2
RN7SKP88-201ENST00000516847 MFSD10Q14728 455 aa2.57□□□□□ -2
RN7SKP88-201ENST00000516847 PCDHB8Q9UN66 801 aa2.56□□□□□ -2
RN7SKP88-201ENST00000516847 FARP1Q9Y4F1 1045 aaPredicted RBP2.56□□□□□ -2
RN7SKP88-201ENST00000516847 PCDHB13Q9Y5F0 798 aa2.56□□□□□ -2
RN7SKP88-201ENST00000516847 SEMA3EO15041 775 aa2.55□□□□□ -2
RN7SKP88-201ENST00000516847 PPP1R37O75864 691 aa2.55□□□□□ -2
RN7SKP88-201ENST00000516847 PDE4AP27815 886 aa2.55□□□□□ -2
RN7SKP88-201ENST00000516847 CAMK2BQ13554 666 aa2.55□□□□□ -2
RN7SKP88-201ENST00000516847 NEUROD2Q15784 382 aa2.55□□□□□ -2
RN7SKP88-201ENST00000516847 CRISPLD2Q9H0B8 497 aa2.55□□□□□ -2
RN7SKP88-201ENST00000516847 TSPYL2Q9H2G4 693 aaPredicted RBP2.55□□□□□ -2
RN7SKP88-201ENST00000516847 NCKAP5LQ9HCH0 1330 aa2.55□□□□□ -2
RN7SKP88-201ENST00000516847 PAK3O75914 559 aaPredicted RBP2.54□□□□□ -2
RN7SKP88-201ENST00000516847 BARGINQ6ZT62 677 aa2.54□□□□□ -2
RN7SKP88-201ENST00000516847 IFNL1Q8IU54 200 aa2.54□□□□□ -2
RN7SKP88-201ENST00000516847 EFCAB3Q8N7B9 438 aa2.54□□□□□ -2
RN7SKP88-201ENST00000516847 DDX27Q96GQ7 796 aaKnown RBP2.54□□□□□ -2
RN7SKP88-201ENST00000516847 SLC24A3Q9HC58 644 aa2.54□□□□□ -2
RN7SKP88-201ENST00000516847 PHF8Q9UPP1 1060 aa2.54□□□□□ -2
RN7SKP88-201ENST00000516847 CHADLQ6NUI6 762 aa2.53□□□□□ -2
RN7SKP88-201ENST00000516847 KIF12Q96FN5 646 aa2.53□□□□□ -2
RN7SKP88-201ENST00000516847 AK7Q96M32 723 aa2.53□□□□□ -2
RN7SKP88-201ENST00000516847 CABP2Q9NPB3 220 aa2.53□□□□□ -2
RN7SKP88-201ENST00000516847 MAP3K13O43283 966 aa2.52□□□□□ -2.01
RN7SKP88-201ENST00000516847 FXR2P51116 673 aaKnown RBP eCLIP2.52□□□□□ -2.01
RN7SKP88-201ENST00000516847 MS4A4AQ96JQ5 239 aa2.52□□□□□ -2.01
RN7SKP88-201ENST00000516847 LARP6Q9BRS8 491 aaKnown RBP2.52□□□□□ -2.01
RN7SKP88-201ENST00000516847 SPDYE16A6NNV3 312 aaPredicted RBP2.51□□□□□ -2.01
RN7SKP88-201ENST00000516847 PRKAR2AP13861 404 aaKnown RBP2.51□□□□□ -2.01
RN7SKP88-201ENST00000516847 ILDR1Q86SU0 546 aaPredicted RBP2.51□□□□□ -2.01
RN7SKP88-201ENST00000516847 GPIHBP1Q8IV16 184 aa2.51□□□□□ -2.01
RN7SKP88-201ENST00000516847 PDIA6Q15084 440 aa2.5□□□□□ -2.01
RN7SKP88-201ENST00000516847 GPHNQ9NQX3 736 aaPredicted RBP2.5□□□□□ -2.01
RN7SKP88-201ENST00000516847 TRIM66O15016 1216 aa2.49□□□□□ -2.01
RN7SKP88-201ENST00000516847 GOLGA2Q08379 1002 aa2.49□□□□□ -2.01
RN7SKP88-201ENST00000516847 PPP1R15BQ5SWA1 713 aa2.49□□□□□ -2.01
RN7SKP88-201ENST00000516847 KDM4CQ9H3R0 1056 aa2.49□□□□□ -2.01
RN7SKP88-201ENST00000516847 GPR37O15354 613 aa2.48□□□□□ -2.01
RN7SKP88-201ENST00000516847 MLLT3P42568 568 aaPredicted RBP2.48□□□□□ -2.01
RN7SKP88-201ENST00000516847 PDE4DQ08499 809 aa2.48□□□□□ -2.01
RN7SKP88-201ENST00000516847 MKRN3Q13064 507 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms