RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 GALR2O43603 387 aaPredicted RBP10.01□□□□□ -0.81
RNU4-49P-201ENST00000516080 NUBP1P53384 320 aa10.01□□□□□ -0.81
RNU4-49P-201ENST00000516080 KLHL34Q8N239 644 aa9.98□□□□□ -0.81
RNU4-49P-201ENST00000516080 FAM212AQ96EL1 285 aa9.98□□□□□ -0.81
RNU4-49P-201ENST00000516080 POTEIP0CG38 1075 aa9.97□□□□□ -0.81
RNU4-49P-201ENST00000516080 KIF12Q96FN5 646 aa9.96□□□□□ -0.82
RNU4-49P-201ENST00000516080 MS4A3Q96HJ5 214 aa9.94□□□□□ -0.82
RNU4-49P-201ENST00000516080 MAP3K13O43283 966 aa9.9□□□□□ -0.82
RNU4-49P-201ENST00000516080 DCAF8Q5TAQ9 597 aa9.9□□□□□ -0.82
RNU4-49P-201ENST00000516080 SGIP1Q9BQI5 828 aa9.88□□□□□ -0.83
RNU4-49P-201ENST00000516080 GSE1Q14687 1217 aa9.86□□□□□ -0.83
RNU4-49P-201ENST00000516080 IFNLR1Q8IU57 520 aaPredicted RBP9.86□□□□□ -0.83
RNU4-49P-201ENST00000516080 ASTLQ6HA08 431 aaPredicted RBP9.85□□□□□ -0.83
RNU4-49P-201ENST00000516080 SPOCK2Q92563 424 aa9.85□□□□□ -0.83
RNU4-49P-201ENST00000516080 LHX8Q68G74 356 aa9.84□□□□□ -0.83
RNU4-49P-201ENST00000516080 PCDHB13Q9Y5F0 798 aa9.84□□□□□ -0.83
RNU4-49P-201ENST00000516080 ATMINO43313 823 aaPredicted RBP9.83□□□□□ -0.84
RNU4-49P-201ENST00000516080 TIE1P35590 1138 aa9.81□□□□□ -0.84
RNU4-49P-201ENST00000516080 PYGBP11216 843 aa9.79□□□□□ -0.84
RNU4-49P-201ENST00000516080 PELP1Q8IZL8 1130 aaKnown RBP9.79□□□□□ -0.84
RNU4-49P-201ENST00000516080 IFNL1Q8IU54 200 aa9.78□□□□□ -0.84
RNU4-49P-201ENST00000516080 BMP2KQ9NSY1 1161 aaPredicted RBP9.78□□□□□ -0.84
RNU4-49P-201ENST00000516080 C7P10643 843 aa9.77□□□□□ -0.85
RNU4-49P-201ENST00000516080 SLC39A7Q92504 469 aa9.77□□□□□ -0.85
RNU4-49P-201ENST00000516080 TRPC6Q9Y210 931 aa9.77□□□□□ -0.85
RNU4-49P-201ENST00000516080 ATN1P54259 1190 aaPredicted RBP9.76□□□□□ -0.85
RNU4-49P-201ENST00000516080 CHRM1P11229 460 aaPredicted RBP9.75□□□□□ -0.85
RNU4-49P-201ENST00000516080 TTLL13PA6NNM8 815 aa9.74□□□□□ -0.85
RNU4-49P-201ENST00000516080 METRNQ9UJH8 293 aa9.74□□□□□ -0.85
RNU4-49P-201ENST00000516080 CIZ1Q9ULV3 898 aaPredicted RBP9.73□□□□□ -0.85
RNU4-49P-201ENST00000516080 ZNF467Q7Z7K2 595 aaPredicted RBP9.71□□□□□ -0.86
RNU4-49P-201ENST00000516080 TMEM106CQ9BVX2 250 aa9.7□□□□□ -0.86
RNU4-49P-201ENST00000516080 PCDHB8Q9UN66 801 aa9.69□□□□□ -0.86
RNU4-49P-201ENST00000516080 IER5LQ5T953 404 aa9.67□□□□□ -0.86
RNU4-49P-201ENST00000516080 TRIM41Q8WV44 630 aa9.67□□□□□ -0.86
RNU4-49P-201ENST00000516080 TRIM35Q9UPQ4 493 aa9.67□□□□□ -0.86
RNU4-49P-201ENST00000516080 POTEB2H3BUK9 544 aa9.64□□□□□ -0.87
RNU4-49P-201ENST00000516080 SEC24BO95487 1268 aa9.63□□□□□ -0.87
RNU4-49P-201ENST00000516080 MAMSTRQ6ZN01 415 aa9.6□□□□□ -0.87
RNU4-49P-201ENST00000516080 PSEN1P49768 467 aa9.59□□□□□ -0.87
RNU4-49P-201ENST00000516080 PDAP1Q13442 181 aaKnown RBP9.59□□□□□ -0.87
RNU4-49P-201ENST00000516080 POTEFA5A3E0 1075 aa9.58□□□□□ -0.88
RNU4-49P-201ENST00000516080 OTUD5Q96G74 571 aa9.58□□□□□ -0.88
RNU4-49P-201ENST00000516080 COLQQ9Y215 455 aaPredicted RBP9.58□□□□□ -0.88
RNU4-49P-201ENST00000516080 GOLGA2Q08379 1002 aa9.56□□□□□ -0.88
RNU4-49P-201ENST00000516080 PLCG2P16885 1265 aa9.55□□□□□ -0.88
RNU4-49P-201ENST00000516080 POTEJP0CG39 1038 aa9.54□□□□□ -0.88
RNU4-49P-201ENST00000516080 IRX5P78411 483 aaPredicted RBP9.53□□□□□ -0.88
RNU4-49P-201ENST00000516080 OCEL1Q9H607 264 aa9.53□□□□□ -0.88
RNU4-49P-201ENST00000516080 SCUBE2Q9NQ36 999 aa9.53□□□□□ -0.88
RNU4-49P-201ENST00000516080 MKRN3Q13064 507 aaKnown RBP9.52□□□□□ -0.89
RNU4-49P-201ENST00000516080 RIOK3O14730 519 aaKnown RBP9.49□□□□□ -0.89
RNU4-49P-201ENST00000516080 CABP2Q9NPB3 220 aa9.46□□□□□ -0.9
RNU4-49P-201ENST00000516080 TAOK2Q9UL54 1235 aa9.45□□□□□ -0.9
RNU4-49P-201ENST00000516080 VGFO15240 615 aaPredicted RBP9.44□□□□□ -0.9
RNU4-49P-201ENST00000516080 RNF25Q96BH1 459 aaPredicted RBP9.44□□□□□ -0.9
RNU4-49P-201ENST00000516080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.44□□□□□ -0.9
RNU4-49P-201ENST00000516080 ECM2O94769 699 aaPredicted RBP9.43□□□□□ -0.9
RNU4-49P-201ENST00000516080 PDCD7Q8N8D1 485 aaKnown RBP9.42□□□□□ -0.9
RNU4-49P-201ENST00000516080 PKD2Q13563 968 aa9.4□□□□□ -0.9
RNU4-49P-201ENST00000516080 ILDR1Q86SU0 546 aaPredicted RBP9.4□□□□□ -0.9
RNU4-49P-201ENST00000516080 L3MBTL3Q96JM7 780 aaPredicted RBP9.4□□□□□ -0.9
RNU4-49P-201ENST00000516080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.39□□□□□ -0.91
RNU4-49P-201ENST00000516080 ZFP91Q96JP5 570 aaPredicted RBP9.39□□□□□ -0.91
RNU4-49P-201ENST00000516080 EFCAB3Q8N7B9 438 aa9.37□□□□□ -0.91
RNU4-49P-201ENST00000516080 SLAIN1Q8ND83 568 aa9.36□□□□□ -0.91
RNU4-49P-201ENST00000516080 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.36□□□□□ -0.91
RNU4-49P-201ENST00000516080 SOX12O15370 315 aa9.34□□□□□ -0.91
RNU4-49P-201ENST00000516080 C3orf67Q6ZVT6 689 aa9.33□□□□□ -0.92
RNU4-49P-201ENST00000516080 G3V3G9 751 aa9.32□□□□□ -0.92
RNU4-49P-201ENST00000516080 RGL2O15211 777 aa9.31□□□□□ -0.92
RNU4-49P-201ENST00000516080 DPY19L2Q6NUT2 758 aa9.31□□□□□ -0.92
RNU4-49P-201ENST00000516080 BCL11BQ9C0K0 894 aaPredicted RBP9.31□□□□□ -0.92
RNU4-49P-201ENST00000516080 STK24Q9Y6E0 443 aa9.3□□□□□ -0.92
RNU4-49P-201ENST00000516080 STK25O00506 426 aa9.29□□□□□ -0.92
RNU4-49P-201ENST00000516080 FAM163AQ96GL9 167 aaPredicted RBP9.29□□□□□ -0.92
RNU4-49P-201ENST00000516080 BOLA1Q9Y3E2 137 aa9.29□□□□□ -0.92
RNU4-49P-201ENST00000516080 SNPHO15079 494 aa9.26□□□□□ -0.93
RNU4-49P-201ENST00000516080 NLRP6P59044 892 aa9.25□□□□□ -0.93
RNU4-49P-201ENST00000516080 PHF8Q9UPP1 1060 aa9.25□□□□□ -0.93
RNU4-49P-201ENST00000516080 TMEM121BQ9BXQ6 578 aaPredicted RBP9.24□□□□□ -0.93
RNU4-49P-201ENST00000516080 POTEMA6NI47 508 aa9.23□□□□□ -0.93
RNU4-49P-201ENST00000516080 POTEGQ6S5H5 508 aa9.23□□□□□ -0.93
RNU4-49P-201ENST00000516080 LCE2DQ5TA82 110 aaPredicted RBP9.22□□□□□ -0.93
RNU4-49P-201ENST00000516080 MS4A4AQ96JQ5 239 aa9.22□□□□□ -0.93
RNU4-49P-201ENST00000516080 MICALL2Q8IY33 904 aa9.19□□□□□ -0.94
RNU4-49P-201ENST00000516080 FBXO22Q8NEZ5 403 aa9.19□□□□□ -0.94
RNU4-49P-201ENST00000516080 MFRPQ9BY79 579 aa9.18□□□□□ -0.94
RNU4-49P-201ENST00000516080 ST18O60284 1047 aa9.17□□□□□ -0.94
RNU4-49P-201ENST00000516080 HS6ST3Q8IZP7 471 aa9.16□□□□□ -0.94
RNU4-49P-201ENST00000516080 PCDH10Q9P2E7 1040 aa9.15□□□□□ -0.94
RNU4-49P-201ENST00000516080 CHGAP10645 457 aaKnown RBP9.12□□□□□ -0.95
RNU4-49P-201ENST00000516080 DOK7Q18PE1 504 aa9.08□□□□□ -0.96
RNU4-49P-201ENST00000516080 TMEM92Q6UXU6 159 aa9.08□□□□□ -0.96
RNU4-49P-201ENST00000516080 DNAJC5Q9H3Z4 198 aa9.07□□□□□ -0.96
RNU4-49P-201ENST00000516080 HOXB3P14651 431 aaPredicted RBP9.06□□□□□ -0.96
RNU4-49P-201ENST00000516080 RIMBP2O15034 1052 aa9.05□□□□□ -0.96
RNU4-49P-201ENST00000516080 ZNF710Q8N1W2 664 aa9.05□□□□□ -0.96
RNU4-49P-201ENST00000516080 RYDENQ9NUL5 291 aaKnown RBP9.05□□□□□ -0.96
RNU4-49P-201ENST00000516080 MARVELD3Q96A59 401 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms