RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 RASEFQ8IZ41 740 aa11.17□□□□□ -0.62
HERC4-215ENST00000515753 POTEB2H3BUK9 544 aa11.16□□□□□ -0.62
HERC4-215ENST00000515753 PELP1Q8IZL8 1130 aaKnown RBP11.16□□□□□ -0.62
HERC4-215ENST00000515753 OTUD5Q96G74 571 aa11.14□□□□□ -0.63
HERC4-215ENST00000515753 KIF12Q96FN5 646 aa11.11□□□□□ -0.63
HERC4-215ENST00000515753 PLSCR2Q9NRY7 297 aa11.1□□□□□ -0.63
HERC4-215ENST00000515753 MAP3K13O43283 966 aa11.08□□□□□ -0.64
HERC4-215ENST00000515753 ATMINO43313 823 aaPredicted RBP11.08□□□□□ -0.64
HERC4-215ENST00000515753 ASTLQ6HA08 431 aaPredicted RBP11.08□□□□□ -0.64
HERC4-215ENST00000515753 TRPC6Q9Y210 931 aa11.07□□□□□ -0.64
HERC4-215ENST00000515753 NUBP1P53384 320 aa11.05□□□□□ -0.64
HERC4-215ENST00000515753 ZBTB47Q9UFB7 747 aaPredicted RBP11.04□□□□□ -0.64
HERC4-215ENST00000515753 ATN1P54259 1190 aaPredicted RBP11.03□□□□□ -0.64
HERC4-215ENST00000515753 METRNQ9UJH8 293 aa11.03□□□□□ -0.64
HERC4-215ENST00000515753 BMP2KQ9NSY1 1161 aaPredicted RBP11□□□□□ -0.65
HERC4-215ENST00000515753 SLC39A7Q92504 469 aa10.99□□□□□ -0.65
HERC4-215ENST00000515753 C7P10643 843 aa10.98□□□□□ -0.65
HERC4-215ENST00000515753 FBXO3Q9UK99 471 aa10.98□□□□□ -0.65
HERC4-215ENST00000515753 FAM212AQ96EL1 285 aa10.96□□□□□ -0.65
HERC4-215ENST00000515753 PCDHB13Q9Y5F0 798 aa10.96□□□□□ -0.65
HERC4-215ENST00000515753 POTEJP0CG39 1038 aa10.95□□□□□ -0.66
HERC4-215ENST00000515753 POTEMA6NI47 508 aa10.94□□□□□ -0.66
HERC4-215ENST00000515753 TIE1P35590 1138 aa10.93□□□□□ -0.66
HERC4-215ENST00000515753 TTLL13PA6NNM8 815 aa10.92□□□□□ -0.66
HERC4-215ENST00000515753 DCAF8Q5TAQ9 597 aa10.92□□□□□ -0.66
HERC4-215ENST00000515753 IFNL1Q8IU54 200 aa10.91□□□□□ -0.66
HERC4-215ENST00000515753 POTEFA5A3E0 1075 aa10.89□□□□□ -0.67
HERC4-215ENST00000515753 VASPP50552 380 aaPredicted RBP10.89□□□□□ -0.67
HERC4-215ENST00000515753 POTEGQ6S5H5 508 aa10.89□□□□□ -0.67
HERC4-215ENST00000515753 KLHL34Q8N239 644 aa10.88□□□□□ -0.67
HERC4-215ENST00000515753 SGIP1Q9BQI5 828 aa10.88□□□□□ -0.67
HERC4-215ENST00000515753 PYGBP11216 843 aa10.87□□□□□ -0.67
HERC4-215ENST00000515753 TRIM35Q9UPQ4 493 aa10.86□□□□□ -0.67
HERC4-215ENST00000515753 COLQQ9Y215 455 aaPredicted RBP10.84□□□□□ -0.67
HERC4-215ENST00000515753 LCE2DQ5TA82 110 aaPredicted RBP10.83□□□□□ -0.68
HERC4-215ENST00000515753 SEC24BO95487 1268 aa10.82□□□□□ -0.68
HERC4-215ENST00000515753 TMEM106CQ9BVX2 250 aa10.82□□□□□ -0.68
HERC4-215ENST00000515753 MAMSTRQ6ZN01 415 aa10.79□□□□□ -0.68
HERC4-215ENST00000515753 PCDHB8Q9UN66 801 aa10.79□□□□□ -0.68
HERC4-215ENST00000515753 SCUBE2Q9NQ36 999 aa10.77□□□□□ -0.69
HERC4-215ENST00000515753 IER5LQ5T953 404 aa10.74□□□□□ -0.69
HERC4-215ENST00000515753 GSE1Q14687 1217 aa10.73□□□□□ -0.69
HERC4-215ENST00000515753 IFNLR1Q8IU57 520 aaPredicted RBP10.73□□□□□ -0.69
HERC4-215ENST00000515753 PCDH10Q9P2E7 1040 aa10.7□□□□□ -0.7
HERC4-215ENST00000515753 FAM163AQ96GL9 167 aaPredicted RBP10.69□□□□□ -0.7
HERC4-215ENST00000515753 PLCG2P16885 1265 aa10.68□□□□□ -0.7
HERC4-215ENST00000515753 IRX5P78411 483 aaPredicted RBP10.66□□□□□ -0.7
HERC4-215ENST00000515753 SPOCK2Q92563 424 aa10.66□□□□□ -0.7
HERC4-215ENST00000515753 CIZ1Q9ULV3 898 aaPredicted RBP10.65□□□□□ -0.7
HERC4-215ENST00000515753 ZNF467Q7Z7K2 595 aaPredicted RBP10.64□□□□□ -0.71
HERC4-215ENST00000515753 CHRM1P11229 460 aaPredicted RBP10.62□□□□□ -0.71
HERC4-215ENST00000515753 OCEL1Q9H607 264 aa10.61□□□□□ -0.71
HERC4-215ENST00000515753 SLAIN1Q8ND83 568 aa10.6□□□□□ -0.71
HERC4-215ENST00000515753 PSEN1P49768 467 aa10.58□□□□□ -0.72
HERC4-215ENST00000515753 GOLGA2Q08379 1002 aa10.57□□□□□ -0.72
HERC4-215ENST00000515753 MKRN3Q13064 507 aaKnown RBP10.55□□□□□ -0.72
HERC4-215ENST00000515753 PDAP1Q13442 181 aaKnown RBP10.52□□□□□ -0.73
HERC4-215ENST00000515753 PDCD7Q8N8D1 485 aaKnown RBP10.52□□□□□ -0.73
HERC4-215ENST00000515753 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.5□□□□□ -0.739e-7■■□□□ 12.4
HERC4-215ENST00000515753 CABP2Q9NPB3 220 aa10.48□□□□□ -0.73
HERC4-215ENST00000515753 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.48□□□□□ -0.73
HERC4-215ENST00000515753 ST18O60284 1047 aa10.46□□□□□ -0.73
HERC4-215ENST00000515753 CDAN1Q8IWY9 1227 aa10.46□□□□□ -0.73
HERC4-215ENST00000515753 DPY19L2Q6NUT2 758 aa10.44□□□□□ -0.74
HERC4-215ENST00000515753 C3orf67Q6ZVT6 689 aa10.42□□□□□ -0.74
HERC4-215ENST00000515753 L3MBTL3Q96JM7 780 aaPredicted RBP10.42□□□□□ -0.74
HERC4-215ENST00000515753 ILDR1Q86SU0 546 aaPredicted RBP10.38□□□□□ -0.75
HERC4-215ENST00000515753 TRIM41Q8WV44 630 aa10.38□□□□□ -0.75
HERC4-215ENST00000515753 EFCAB3Q8N7B9 438 aa10.36□□□□□ -0.75
HERC4-215ENST00000515753 RNF25Q96BH1 459 aaPredicted RBP10.35□□□□□ -0.75
HERC4-215ENST00000515753 SNPHO15079 494 aa10.34□□□□□ -0.75
HERC4-215ENST00000515753 MARVELD3Q96A59 401 aa10.33□□□□□ -0.76
HERC4-215ENST00000515753 RIOK3O14730 519 aaKnown RBP10.32□□□□□ -0.76
HERC4-215ENST00000515753 BOLA1Q9Y3E2 137 aa10.32□□□□□ -0.76
HERC4-215ENST00000515753 G3V3G9 751 aa10.31□□□□□ -0.76
HERC4-215ENST00000515753 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.3□□□□□ -0.76
HERC4-215ENST00000515753 ZFP91Q96JP5 570 aaPredicted RBP10.3□□□□□ -0.76
HERC4-215ENST00000515753 TMEM121BQ9BXQ6 578 aaPredicted RBP10.28□□□□□ -0.76
HERC4-215ENST00000515753 VGFO15240 615 aaPredicted RBP10.25□□□□□ -0.77
HERC4-215ENST00000515753 MMRN1Q13201 1228 aa10.24□□□□□ -0.77
HERC4-215ENST00000515753 SPNS2Q8IVW8 549 aa10.24□□□□□ -0.77
HERC4-215ENST00000515753 PHF8Q9UPP1 1060 aa10.22□□□□□ -0.77
HERC4-215ENST00000515753 EMP3P54852 163 aa10.21□□□□□ -0.77
HERC4-215ENST00000515753 MS4A4AQ96JQ5 239 aa10.21□□□□□ -0.77
HERC4-215ENST00000515753 SOX12O15370 315 aa10.2□□□□□ -0.78
HERC4-215ENST00000515753 HOXB3P14651 431 aaPredicted RBP10.19□□□□□ -0.78
HERC4-215ENST00000515753 MICALL2Q8IY33 904 aa10.19□□□□□ -0.78
HERC4-215ENST00000515753 ECM2O94769 699 aaPredicted RBP10.18□□□□□ -0.78
HERC4-215ENST00000515753 BCL11BQ9C0K0 894 aaPredicted RBP10.18□□□□□ -0.78
HERC4-215ENST00000515753 POTEB3A0JP26 581 aa10.17□□□□□ -0.78
HERC4-215ENST00000515753 FAM205CA6NFA0 338 aa10.17□□□□□ -0.78
HERC4-215ENST00000515753 POTEBQ6S5H4 581 aa10.17□□□□□ -0.78
HERC4-215ENST00000515753 TMEM92Q6UXU6 159 aa10.16□□□□□ -0.78
HERC4-215ENST00000515753 STK24Q9Y6E0 443 aa10.16□□□□□ -0.78
HERC4-215ENST00000515753 HS3ST6Q96QI5 342 aa10.14□□□□□ -0.79
HERC4-215ENST00000515753 ZNF710Q8N1W2 664 aa10.13□□□□□ -0.79
HERC4-215ENST00000515753 STK25O00506 426 aa10.12□□□□□ -0.79
HERC4-215ENST00000515753 PKD2Q13563 968 aa10.12□□□□□ -0.79
HERC4-215ENST00000515753 RGL2O15211 777 aa10.11□□□□□ -0.79
HERC4-215ENST00000515753 TAOK2Q9UL54 1235 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms