RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 OTUD5Q96G74 571 aa12.14□□□□□ -0.47
CAST-243ENST00000515160 POTEB2H3BUK9 544 aa12.04□□□□□ -0.48
CAST-243ENST00000515160 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.04□□□□□ -0.48
CAST-243ENST00000515160 KLHL34Q8N239 644 aa12.02□□□□□ -0.49
CAST-243ENST00000515160 ZNF579Q8NAF0 562 aaKnown RBP12.02□□□□□ -0.49
CAST-243ENST00000515160 BBXQ8WY36 941 aaPredicted RBP12.01□□□□□ -0.49
CAST-243ENST00000515160 SPOCK2Q92563 424 aa12.01□□□□□ -0.49
CAST-243ENST00000515160 ZRANB1Q9UGI0 708 aa12.01□□□□□ -0.49
CAST-243ENST00000515160 PRKCSHP14314 528 aaPredicted RBP12□□□□□ -0.49
CAST-243ENST00000515160 TAOK2Q9UL54 1235 aa12□□□□□ -0.49
CAST-243ENST00000515160 ECM2O94769 699 aaPredicted RBP11.98□□□□□ -0.49
CAST-243ENST00000515160 NISCHQ9Y2I1 1504 aa11.96□□□□□ -0.5
CAST-243ENST00000515160 PAXIP1Q6ZW49 1069 aaPredicted RBP11.93□□□□□ -0.5
CAST-243ENST00000515160 PCDH10Q9P2E7 1040 aa11.93□□□□□ -0.5
CAST-243ENST00000515160 PAK3O75914 559 aaPredicted RBP11.91□□□□□ -0.5
CAST-243ENST00000515160 GALR2O43603 387 aaPredicted RBP11.9□□□□□ -0.5
CAST-243ENST00000515160 CFAP44Q96MT7 982 aa11.9□□□□□ -0.5
CAST-243ENST00000515160 STAG3Q9UJ98 1225 aa11.9□□□□□ -0.5
CAST-243ENST00000515160 KDM2AQ9Y2K7 1162 aa11.9□□□□□ -0.5
CAST-243ENST00000515160 NPM1P06748 294 aaKnown RBP eCLIP11.89□□□□□ -0.51
CAST-243ENST00000515160 PLCD3Q8N3E9 789 aa11.85□□□□□ -0.51
CAST-243ENST00000515160 TPRNQ4KMQ1 711 aa11.83□□□□□ -0.52
CAST-243ENST00000515160 SPRYD3Q8NCJ5 442 aa11.82□□□□□ -0.52
CAST-243ENST00000515160 RGL2O15211 777 aa11.81□□□□□ -0.52
CAST-243ENST00000515160 CREBZFQ9NS37 354 aa11.81□□□□□ -0.52
CAST-243ENST00000515160 LCE2DQ5TA82 110 aaPredicted RBP11.77□□□□□ -0.53
CAST-243ENST00000515160 MIER1Q8N108 512 aa11.77□□□□□ -0.53
CAST-243ENST00000515160 PELP1Q8IZL8 1130 aaKnown RBP11.76□□□□□ -0.53
CAST-243ENST00000515160 FAM163AQ96GL9 167 aaPredicted RBP11.73□□□□□ -0.53
CAST-243ENST00000515160 TSHZ2Q9NRE2 1034 aa11.73□□□□□ -0.53
CAST-243ENST00000515160 POTEJP0CG39 1038 aa11.72□□□□□ -0.53
CAST-243ENST00000515160 MAMSTRQ6ZN01 415 aa11.71□□□□□ -0.53
CAST-243ENST00000515160 PHF12Q96QT6 1004 aa11.71□□□□□ -0.53
CAST-243ENST00000515160 CHGAP10645 457 aaKnown RBP11.69□□□□□ -0.54
CAST-243ENST00000515160 CIZ1Q9ULV3 898 aaPredicted RBP11.69□□□□□ -0.54
CAST-243ENST00000515160 PLEKHG5O94827 1062 aa11.67□□□□□ -0.54
CAST-243ENST00000515160 SLC39A7Q92504 469 aa11.67□□□□□ -0.54
CAST-243ENST00000515160 ZBTB47Q9UFB7 747 aaPredicted RBP11.67□□□□□ -0.54
CAST-243ENST00000515160 C7P10643 843 aa11.66□□□□□ -0.54
CAST-243ENST00000515160 METRNQ9UJH8 293 aa11.66□□□□□ -0.54
CAST-243ENST00000515160 TRIM41Q8WV44 630 aa11.62□□□□□ -0.55
CAST-243ENST00000515160 ASTLQ6HA08 431 aaPredicted RBP11.61□□□□□ -0.55
CAST-243ENST00000515160 SCUBE2Q9NQ36 999 aa11.6□□□□□ -0.55
CAST-243ENST00000515160 NBR1Q14596 966 aa11.58□□□□□ -0.56
CAST-243ENST00000515160 ATMINO43313 823 aaPredicted RBP11.57□□□□□ -0.56
CAST-243ENST00000515160 HS6ST3Q8IZP7 471 aa11.56□□□□□ -0.56
CAST-243ENST00000515160 MS4A3Q96HJ5 214 aa11.56□□□□□ -0.56
CAST-243ENST00000515160 DNAJC5Q9H3Z4 198 aa11.55□□□□□ -0.56
CAST-243ENST00000515160 CDAN1Q8IWY9 1227 aa11.53□□□□□ -0.56
CAST-243ENST00000515160 MNX1P50219 401 aaPredicted RBP11.48□□□□□ -0.57
CAST-243ENST00000515160 GSE1Q14687 1217 aa11.48□□□□□ -0.57
CAST-243ENST00000515160 RNF25Q96BH1 459 aaPredicted RBP11.42□□□□□ -0.58
CAST-243ENST00000515160 ATN1P54259 1190 aaPredicted RBP11.41□□□□□ -0.58
CAST-243ENST00000515160 TSPYL2Q9H2G4 693 aaPredicted RBP11.41□□□□□ -0.58
CAST-243ENST00000515160 RIOK3O14730 519 aaKnown RBP11.38□□□□□ -0.59
CAST-243ENST00000515160 NKX1-1Q15270 411 aaPredicted RBP11.37□□□□□ -0.59
CAST-243ENST00000515160 DCAF8Q5TAQ9 597 aa11.36□□□□□ -0.59
CAST-243ENST00000515160 POTEFA5A3E0 1075 aa11.35□□□□□ -0.59
CAST-243ENST00000515160 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
CAST-243ENST00000515160 NUBP1P53384 320 aa11.35□□□□□ -0.59
CAST-243ENST00000515160 CCDC61Q9Y6R9 512 aa11.34□□□□□ -0.59
CAST-243ENST00000515160 MMRN1Q13201 1228 aa11.33□□□□□ -0.6
CAST-243ENST00000515160 SEC24BO95487 1268 aa11.32□□□□□ -0.6
CAST-243ENST00000515160 TIE1P35590 1138 aa11.32□□□□□ -0.6
CAST-243ENST00000515160 KIF12Q96FN5 646 aa11.32□□□□□ -0.6
CAST-243ENST00000515160 ABCC9O60706 1549 aa11.31□□□□□ -0.6
CAST-243ENST00000515160 STK25O00506 426 aa11.31□□□□□ -0.6
CAST-243ENST00000515160 BMP2KQ9NSY1 1161 aaPredicted RBP11.31□□□□□ -0.6
CAST-243ENST00000515160 VGFO15240 615 aaPredicted RBP11.3□□□□□ -0.6
CAST-243ENST00000515160 FAM212AQ96EL1 285 aa11.27□□□□□ -0.61
CAST-243ENST00000515160 SPNS2Q8IVW8 549 aa11.26□□□□□ -0.61
CAST-243ENST00000515160 RYDENQ9NUL5 291 aaKnown RBP11.25□□□□□ -0.61
CAST-243ENST00000515160 ST18O60284 1047 aa11.23□□□□□ -0.61
CAST-243ENST00000515160 GTF3C3Q9Y5Q9 886 aa11.23□□□□□ -0.61
CAST-243ENST00000515160 TULP1O00294 542 aaPredicted RBP11.22□□□□□ -0.61
CAST-243ENST00000515160 MAP3K13O43283 966 aa11.22□□□□□ -0.61
CAST-243ENST00000515160 CHRM1P11229 460 aaPredicted RBP11.22□□□□□ -0.61
CAST-243ENST00000515160 TIMELESSQ9UNS1 1208 aa11.22□□□□□ -0.61
CAST-243ENST00000515160 IER5LQ5T953 404 aa11.21□□□□□ -0.61
CAST-243ENST00000515160 SGIP1Q9BQI5 828 aa11.21□□□□□ -0.61
CAST-243ENST00000515160 TRPC6Q9Y210 931 aa11.2□□□□□ -0.62
CAST-243ENST00000515160 COLQQ9Y215 455 aaPredicted RBP11.2□□□□□ -0.62
CAST-243ENST00000515160 STK24Q9Y6E0 443 aa11.2□□□□□ -0.62
CAST-243ENST00000515160 TTLL13PA6NNM8 815 aa11.19□□□□□ -0.62
CAST-243ENST00000515160 BCL11BQ9C0K0 894 aaPredicted RBP11.18□□□□□ -0.62
CAST-243ENST00000515160 ERICH6Q7L0X2 663 aa11.17□□□□□ -0.62
CAST-243ENST00000515160 SLAIN1Q8ND83 568 aa11.17□□□□□ -0.62
CAST-243ENST00000515160 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.16□□□□□ -0.62
CAST-243ENST00000515160 P3H3Q8IVL6 736 aa11.16□□□□□ -0.62
CAST-243ENST00000515160 ZFP91Q96JP5 570 aaPredicted RBP11.16□□□□□ -0.62
CAST-243ENST00000515160 TRIM35Q9UPQ4 493 aa11.14□□□□□ -0.63
CAST-243ENST00000515160 TMEM132AQ24JP5 1023 aa11.13□□□□□ -0.63
CAST-243ENST00000515160 RASEFQ8IZ41 740 aa11.12□□□□□ -0.63
CAST-243ENST00000515160 PYGBP11216 843 aa11.08□□□□□ -0.64
CAST-243ENST00000515160 PLCG2P16885 1265 aa11.08□□□□□ -0.64
CAST-243ENST00000515160 PCDHB13Q9Y5F0 798 aa11.08□□□□□ -0.64
CAST-243ENST00000515160 TMEM121BQ9BXQ6 578 aaPredicted RBP11.07□□□□□ -0.64
CAST-243ENST00000515160 WDR70Q9NW82 654 aa11.07□□□□□ -0.64
CAST-243ENST00000515160 SNPHO15079 494 aa11.06□□□□□ -0.64
CAST-243ENST00000515160 MARVELD3Q96A59 401 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms