RNA–Protein interactions for RNA: ENST00000513895.1

LINC00616-204, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-204ENST00000513895 RASEFQ8IZ41 740 aa14.49□□□□□ -0.09
LINC00616-204ENST00000513895 ASTLQ6HA08 431 aaPredicted RBP14.48□□□□□ -0.09
LINC00616-204ENST00000513895 PELP1Q8IZL8 1130 aaKnown RBP14.47□□□□□ -0.09
LINC00616-204ENST00000513895 KIF12Q96FN5 646 aa14.45□□□□□ -0.1
LINC00616-204ENST00000513895 ATMINO43313 823 aaPredicted RBP14.43□□□□□ -0.1
LINC00616-204ENST00000513895 ZBTB47Q9UFB7 747 aaPredicted RBP14.42□□□□□ -0.1
LINC00616-204ENST00000513895 POTEB2H3BUK9 544 aa14.41□□□□□ -0.1
LINC00616-204ENST00000513895 METRNQ9UJH8 293 aa14.37□□□□□ -0.11
LINC00616-204ENST00000513895 MAP3K13O43283 966 aa14.36□□□□□ -0.11
LINC00616-204ENST00000513895 SLC39A7Q92504 469 aa14.36□□□□□ -0.11
LINC00616-204ENST00000513895 NUBP1P53384 320 aa14.34□□□□□ -0.11
LINC00616-204ENST00000513895 OTUD5Q96G74 571 aa14.34□□□□□ -0.11
LINC00616-204ENST00000513895 C7P10643 843 aa14.33□□□□□ -0.12
LINC00616-204ENST00000513895 ATN1P54259 1190 aaPredicted RBP14.33□□□□□ -0.12
LINC00616-204ENST00000513895 TRPC6Q9Y210 931 aa14.33□□□□□ -0.12
LINC00616-204ENST00000513895 BMP2KQ9NSY1 1161 aaPredicted RBP14.31□□□□□ -0.12
LINC00616-204ENST00000513895 TIE1P35590 1138 aa14.29□□□□□ -0.12
LINC00616-204ENST00000513895 FBXO3Q9UK99 471 aa14.28□□□□□ -0.12
LINC00616-204ENST00000513895 FAM212AQ96EL1 285 aa14.26□□□□□ -0.13
LINC00616-204ENST00000513895 SGIP1Q9BQI5 828 aa14.24□□□□□ -0.13
LINC00616-204ENST00000513895 PCDHB13Q9Y5F0 798 aa14.23□□□□□ -0.13
LINC00616-204ENST00000513895 TTLL13PA6NNM8 815 aa14.2□□□□□ -0.14
LINC00616-204ENST00000513895 POTEJP0CG39 1038 aa14.2□□□□□ -0.14
LINC00616-204ENST00000513895 POTEFA5A3E0 1075 aa14.16□□□□□ -0.14
LINC00616-204ENST00000513895 IFNL1Q8IU54 200 aa14.15□□□□□ -0.14
LINC00616-204ENST00000513895 MAMSTRQ6ZN01 415 aa14.13□□□□□ -0.15
LINC00616-204ENST00000513895 VASPP50552 380 aaPredicted RBP14.12□□□□□ -0.15
LINC00616-204ENST00000513895 TRIM35Q9UPQ4 493 aa14.11□□□□□ -0.15
LINC00616-204ENST00000513895 DCAF8Q5TAQ9 597 aa14.09□□□□□ -0.15
LINC00616-204ENST00000513895 SCUBE2Q9NQ36 999 aa14.08□□□□□ -0.16
LINC00616-204ENST00000513895 IER5LQ5T953 404 aa14.06□□□□□ -0.16
LINC00616-204ENST00000513895 COLQQ9Y215 455 aaPredicted RBP14.06□□□□□ -0.16
LINC00616-204ENST00000513895 SEC24BO95487 1268 aa14.05□□□□□ -0.16
LINC00616-204ENST00000513895 PYGBP11216 843 aa14.05□□□□□ -0.16
LINC00616-204ENST00000513895 TMEM106CQ9BVX2 250 aa14.04□□□□□ -0.16
LINC00616-204ENST00000513895 KLHL34Q8N239 644 aa14.03□□□□□ -0.16
LINC00616-204ENST00000513895 POTEMA6NI47 508 aa13.96□□□□□ -0.17
LINC00616-204ENST00000513895 GSE1Q14687 1217 aa13.96□□□□□ -0.17
LINC00616-204ENST00000513895 PCDHB8Q9UN66 801 aa13.94□□□□□ -0.18
LINC00616-204ENST00000513895 POTEGQ6S5H5 508 aa13.92□□□□□ -0.18
LINC00616-204ENST00000513895 PLCG2P16885 1265 aa13.89□□□□□ -0.19
LINC00616-204ENST00000513895 IRX5P78411 483 aaPredicted RBP13.89□□□□□ -0.19
LINC00616-204ENST00000513895 LCE2DQ5TA82 110 aaPredicted RBP13.88□□□□□ -0.19
LINC00616-204ENST00000513895 ZNF467Q7Z7K2 595 aaPredicted RBP13.87□□□□□ -0.19
LINC00616-204ENST00000513895 IFNLR1Q8IU57 520 aaPredicted RBP13.85□□□□□ -0.19
LINC00616-204ENST00000513895 PLSCR2Q9NRY7 297 aa13.85□□□□□ -0.19
LINC00616-204ENST00000513895 CHRM1P11229 460 aaPredicted RBP13.84□□□□□ -0.19
LINC00616-204ENST00000513895 FAM163AQ96GL9 167 aaPredicted RBP13.83□□□□□ -0.2
LINC00616-204ENST00000513895 NISCHQ9Y2I1 1504 aa13.81□□□□□ -0.2
LINC00616-204ENST00000513895 SPOCK2Q92563 424 aa13.81□□□□□ -0.2
LINC00616-204ENST00000513895 OCEL1Q9H607 264 aa13.81□□□□□ -0.2
LINC00616-204ENST00000513895 SLAIN1Q8ND83 568 aa13.77□□□□□ -0.21
LINC00616-204ENST00000513895 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
LINC00616-204ENST00000513895 PSEN1P49768 467 aa13.72□□□□□ -0.21
LINC00616-204ENST00000513895 PCDH10Q9P2E7 1040 aa13.72□□□□□ -0.21
LINC00616-204ENST00000513895 GOLGA2Q08379 1002 aa13.71□□□□□ -0.21
LINC00616-204ENST00000513895 PDCD7Q8N8D1 485 aaKnown RBP13.71□□□□□ -0.21
LINC00616-204ENST00000513895 MKRN3Q13064 507 aaKnown RBP13.7□□□□□ -0.22
LINC00616-204ENST00000513895 PDAP1Q13442 181 aaKnown RBP13.68□□□□□ -0.22
LINC00616-204ENST00000513895 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.65□□□□□ -0.22
LINC00616-204ENST00000513895 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.62□□□□□ -0.23
LINC00616-204ENST00000513895 ST18O60284 1047 aa13.61□□□□□ -0.23
LINC00616-204ENST00000513895 L3MBTL3Q96JM7 780 aaPredicted RBP13.58□□□□□ -0.24
LINC00616-204ENST00000513895 C3orf67Q6ZVT6 689 aa13.57□□□□□ -0.24
LINC00616-204ENST00000513895 ILDR1Q86SU0 546 aaPredicted RBP13.57□□□□□ -0.24
LINC00616-204ENST00000513895 TRIM41Q8WV44 630 aa13.57□□□□□ -0.24
LINC00616-204ENST00000513895 CABP2Q9NPB3 220 aa13.57□□□□□ -0.24
LINC00616-204ENST00000513895 SNPHO15079 494 aa13.53□□□□□ -0.24
LINC00616-204ENST00000513895 CDAN1Q8IWY9 1227 aa13.5□□□□□ -0.25
LINC00616-204ENST00000513895 TMEM121BQ9BXQ6 578 aaPredicted RBP13.49□□□□□ -0.25
LINC00616-204ENST00000513895 DPY19L2Q6NUT2 758 aa13.48□□□□□ -0.25
LINC00616-204ENST00000513895 BOLA1Q9Y3E2 137 aa13.42□□□□□ -0.26
LINC00616-204ENST00000513895 EFCAB3Q8N7B9 438 aa13.41□□□□□ -0.26
LINC00616-204ENST00000513895 RNF25Q96BH1 459 aaPredicted RBP13.41□□□□□ -0.26
LINC00616-204ENST00000513895 G3V3G9 751 aa13.4□□□□□ -0.26
LINC00616-204ENST00000513895 RIOK3O14730 519 aaKnown RBP13.39□□□□□ -0.27
LINC00616-204ENST00000513895 MARVELD3Q96A59 401 aa13.38□□□□□ -0.27
LINC00616-204ENST00000513895 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.33□□□□□ -0.28
LINC00616-204ENST00000513895 VGFO15240 615 aaPredicted RBP13.33□□□□□ -0.28
LINC00616-204ENST00000513895 ZFP91Q96JP5 570 aaPredicted RBP13.33□□□□□ -0.28
LINC00616-204ENST00000513895 EMP3P54852 163 aa13.3□□□□□ -0.28
LINC00616-204ENST00000513895 SOX12O15370 315 aa13.28□□□□□ -0.28
LINC00616-204ENST00000513895 HOXB3P14651 431 aaPredicted RBP13.26□□□□□ -0.29
LINC00616-204ENST00000513895 MICALL2Q8IY33 904 aa13.24□□□□□ -0.29
LINC00616-204ENST00000513895 MS4A4AQ96JQ5 239 aa13.23□□□□□ -0.29
LINC00616-204ENST00000513895 PHF8Q9UPP1 1060 aa13.22□□□□□ -0.29
LINC00616-204ENST00000513895 HS3ST6Q96QI5 342 aa13.2□□□□□ -0.3
LINC00616-204ENST00000513895 FAM205CA6NFA0 338 aa13.19□□□□□ -0.3
LINC00616-204ENST00000513895 POTEB3A0JP26 581 aa13.18□□□□□ -0.3
LINC00616-204ENST00000513895 DOK7Q18PE1 504 aa13.18□□□□□ -0.3
LINC00616-204ENST00000513895 POTEBQ6S5H4 581 aa13.18□□□□□ -0.3
LINC00616-204ENST00000513895 TAOK2Q9UL54 1235 aa13.18□□□□□ -0.3
LINC00616-204ENST00000513895 TMEM92Q6UXU6 159 aa13.17□□□□□ -0.3
LINC00616-204ENST00000513895 SPNS2Q8IVW8 549 aa13.17□□□□□ -0.3
LINC00616-204ENST00000513895 ZNF710Q8N1W2 664 aa13.17□□□□□ -0.3
LINC00616-204ENST00000513895 BCL11BQ9C0K0 894 aaPredicted RBP13.17□□□□□ -0.3
LINC00616-204ENST00000513895 HOXB1P14653 301 aaPredicted RBP13.15□□□□□ -0.3
LINC00616-204ENST00000513895 ECM2O94769 699 aaPredicted RBP13.13□□□□□ -0.31
LINC00616-204ENST00000513895 MMRN1Q13201 1228 aa13.13□□□□□ -0.31
LINC00616-204ENST00000513895 NLRP6P59044 892 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms