RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 CREBZFQ9NS37 354 aa9.14□□□□□ -0.95
GYPB-214ENST00000513557 HS6ST3Q8IZP7 471 aa9.12□□□□□ -0.95
GYPB-214ENST00000513557 FAM212AQ96EL1 285 aa9.12□□□□□ -0.95
GYPB-214ENST00000513557 RNF25Q96BH1 459 aaPredicted RBP9.11□□□□□ -0.95
GYPB-214ENST00000513557 KDM2AQ9Y2K7 1162 aa9.11□□□□□ -0.95
GYPB-214ENST00000513557 MNX1P50219 401 aaPredicted RBP9.09□□□□□ -0.95
GYPB-214ENST00000513557 TAOK2Q9UL54 1235 aa9.09□□□□□ -0.95
GYPB-214ENST00000513557 RIOK3O14730 519 aaKnown RBP9.08□□□□□ -0.96
GYPB-214ENST00000513557 TSHZ2Q9NRE2 1034 aa9.08□□□□□ -0.96
GYPB-214ENST00000513557 PITPNM1O00562 1244 aa9.05□□□□□ -0.96
GYPB-214ENST00000513557 RASEFQ8IZ41 740 aa9.04□□□□□ -0.96
GYPB-214ENST00000513557 DNAJC5Q9H3Z4 198 aa9.04□□□□□ -0.96
GYPB-214ENST00000513557 CHRM1P11229 460 aaPredicted RBP9.02□□□□□ -0.97
GYPB-214ENST00000513557 VGFO15240 615 aaPredicted RBP9.01□□□□□ -0.97
GYPB-214ENST00000513557 STK25O00506 426 aa8.99□□□□□ -0.97
GYPB-214ENST00000513557 NKX1-1Q15270 411 aaPredicted RBP8.97□□□□□ -0.97
GYPB-214ENST00000513557 PYGBP11216 843 aa8.96□□□□□ -0.98
GYPB-214ENST00000513557 SGIP1Q9BQI5 828 aa8.94□□□□□ -0.98
GYPB-214ENST00000513557 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.93□□□□□ -0.98
GYPB-214ENST00000513557 ZFP91Q96JP5 570 aaPredicted RBP8.93□□□□□ -0.98
GYPB-214ENST00000513557 GTPBP6O43824 516 aaPredicted RBP8.92□□□□□ -0.98
GYPB-214ENST00000513557 CHADLQ6NUI6 762 aa8.92□□□□□ -0.98
GYPB-214ENST00000513557 BCL11BQ9C0K0 894 aaPredicted RBP8.92□□□□□ -0.98
GYPB-214ENST00000513557 STK24Q9Y6E0 443 aa8.92□□□□□ -0.98
GYPB-214ENST00000513557 PRKCSHP14314 528 aaPredicted RBP8.9□□□□□ -0.98
GYPB-214ENST00000513557 TSPYL2Q9H2G4 693 aaPredicted RBP8.89□□□□□ -0.99
GYPB-214ENST00000513557 RYDENQ9NUL5 291 aaKnown RBP8.89□□□□□ -0.99
GYPB-214ENST00000513557 FARP1Q9Y4F1 1045 aaPredicted RBP8.88□□□□□ -0.99
GYPB-214ENST00000513557 ZNF467Q7Z7K2 595 aaPredicted RBP8.86□□□□□ -0.99
GYPB-214ENST00000513557 NBR1Q14596 966 aa8.85□□□□□ -0.99
GYPB-214ENST00000513557 TPRNQ4KMQ1 711 aa8.84□□□□□ -0.99
GYPB-214ENST00000513557 PRKAR2AP13861 404 aaKnown RBP8.83□□□□□ -1
GYPB-214ENST00000513557 PDAP1Q13442 181 aaKnown RBP8.81□□□□□ -1
GYPB-214ENST00000513557 PCDHB8Q9UN66 801 aa8.79□□□□□ -1
GYPB-214ENST00000513557 PCDHB13Q9Y5F0 798 aa8.79□□□□□ -1
GYPB-214ENST00000513557 FXR2P51116 673 aaKnown RBP eCLIP8.78□□□□□ -1
GYPB-214ENST00000513557 CCDC61Q9Y6R9 512 aa8.78□□□□□ -1
GYPB-214ENST00000513557 PAK3O75914 559 aaPredicted RBP8.76□□□□□ -1.01
GYPB-214ENST00000513557 ZNF579Q8NAF0 562 aaKnown RBP8.76□□□□□ -1.01
GYPB-214ENST00000513557 PSEN1P49768 467 aa8.74□□□□□ -1.01
GYPB-214ENST00000513557 CHRDL2Q6WN34 429 aa8.72□□□□□ -1.01
GYPB-214ENST00000513557 PIP4P2Q8N4L2 257 aa8.7□□□□□ -1.02
GYPB-214ENST00000513557 IFNL1Q8IU54 200 aa8.69□□□□□ -1.02
GYPB-214ENST00000513557 MAP3K13O43283 966 aa8.68□□□□□ -1.02
GYPB-214ENST00000513557 P3H3Q8IVL6 736 aa8.68□□□□□ -1.02
GYPB-214ENST00000513557 MFRPQ9BY79 579 aa8.68□□□□□ -1.02
GYPB-214ENST00000513557 KIF12Q96FN5 646 aa8.67□□□□□ -1.02
GYPB-214ENST00000513557 CADPS2Q86UW7 1296 aa8.66□□□□□ -1.02
GYPB-214ENST00000513557 WDR70Q9NW82 654 aa8.66□□□□□ -1.02
GYPB-214ENST00000513557 CABP2Q9NPB3 220 aa8.64□□□□□ -1.03
GYPB-214ENST00000513557 NLRP6P59044 892 aa8.63□□□□□ -1.03
GYPB-214ENST00000513557 EFCAB3Q8N7B9 438 aa8.63□□□□□ -1.03
GYPB-214ENST00000513557 ZRANB1Q9UGI0 708 aa8.63□□□□□ -1.03
GYPB-214ENST00000513557 SOX12O15370 315 aa8.62□□□□□ -1.03
GYPB-214ENST00000513557 CD44P16070 742 aaKnown RBP8.6□□□□□ -1.03
GYPB-214ENST00000513557 FBXO22Q8NEZ5 403 aa8.6□□□□□ -1.03
GYPB-214ENST00000513557 PPP1R37O75864 691 aa8.59□□□□□ -1.03
GYPB-214ENST00000513557 KCNV2Q8TDN2 545 aa8.59□□□□□ -1.03
GYPB-214ENST00000513557 PHF8Q9UPP1 1060 aa8.59□□□□□ -1.03
GYPB-214ENST00000513557 PHF12Q96QT6 1004 aa8.58□□□□□ -1.04
GYPB-214ENST00000513557 GOLGA2Q08379 1002 aa8.53□□□□□ -1.04
GYPB-214ENST00000513557 TMEM106CQ9BVX2 250 aa8.53□□□□□ -1.04
GYPB-214ENST00000513557 E2F4Q16254 413 aa8.5□□□□□ -1.05
GYPB-214ENST00000513557 ARHGEF1Q92888 912 aaKnown RBP8.5□□□□□ -1.05
GYPB-214ENST00000513557 MS4A3Q96HJ5 214 aa8.49□□□□□ -1.05
GYPB-214ENST00000513557 MS4A4AQ96JQ5 239 aa8.49□□□□□ -1.05
GYPB-214ENST00000513557 TULP1O00294 542 aaPredicted RBP8.48□□□□□ -1.05
GYPB-214ENST00000513557 MKRN3Q13064 507 aaKnown RBP8.48□□□□□ -1.05
GYPB-214ENST00000513557 LMOD2Q6P5Q4 547 aa8.48□□□□□ -1.05
GYPB-214ENST00000513557 C19orf67A6NJJ6 358 aa8.47□□□□□ -1.05
GYPB-214ENST00000513557 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.47□□□□□ -1.05
GYPB-214ENST00000513557 PDE4AP27815 886 aa8.46□□□□□ -1.06
GYPB-214ENST00000513557 LARP6Q9BRS8 491 aaKnown RBP8.46□□□□□ -1.06
GYPB-214ENST00000513557 TRPC6Q9Y210 931 aa8.46□□□□□ -1.06
GYPB-214ENST00000513557 NCKAP5LQ9HCH0 1330 aa8.46□□□□□ -1.06
GYPB-214ENST00000513557 TIE1P35590 1138 aa8.43□□□□□ -1.06
GYPB-214ENST00000513557 CRISPLD2Q9H0B8 497 aa8.43□□□□□ -1.06
GYPB-214ENST00000513557 MFSD10Q14728 455 aa8.42□□□□□ -1.06
GYPB-214ENST00000513557 DDX27Q96GQ7 796 aaKnown RBP8.42□□□□□ -1.06
GYPB-214ENST00000513557 TTLL13PA6NNM8 815 aa8.41□□□□□ -1.06
GYPB-214ENST00000513557 SEMA3EO15041 775 aa8.4□□□□□ -1.06
GYPB-214ENST00000513557 TESPA1A2RU30 521 aaPredicted RBP8.39□□□□□ -1.07
GYPB-214ENST00000513557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.39□□□□□ -1.07
GYPB-214ENST00000513557 BMP2KQ9NSY1 1161 aaPredicted RBP8.38□□□□□ -1.07
GYPB-214ENST00000513557 ILDR1Q86SU0 546 aaPredicted RBP8.36□□□□□ -1.07
GYPB-214ENST00000513557 ARIH1Q9Y4X5 557 aaPredicted RBP8.36□□□□□ -1.07
GYPB-214ENST00000513557 CAMK2BQ13554 666 aa8.35□□□□□ -1.07
GYPB-214ENST00000513557 SMYD5Q6GMV2 418 aa8.35□□□□□ -1.07
GYPB-214ENST00000513557 TRIM35Q9UPQ4 493 aa8.35□□□□□ -1.07
GYPB-214ENST00000513557 GALR2O43603 387 aaPredicted RBP8.34□□□□□ -1.07
GYPB-214ENST00000513557 ZC3H15Q8WU90 426 aaKnown RBP8.34□□□□□ -1.07
GYPB-214ENST00000513557 PPP1R15BQ5SWA1 713 aa8.32□□□□□ -1.08
GYPB-214ENST00000513557 GPHNQ9NQX3 736 aaPredicted RBP8.32□□□□□ -1.08
GYPB-214ENST00000513557 HAX1O00165 279 aa8.31□□□□□ -1.08
GYPB-214ENST00000513557 CLCN6P51797 869 aa8.31□□□□□ -1.08
GYPB-214ENST00000513557 TMEM132AQ24JP5 1023 aa8.3□□□□□ -1.08
GYPB-214ENST00000513557 DPY19L2Q6NUT2 758 aa8.3□□□□□ -1.08
GYPB-214ENST00000513557 MICALL2Q8IY33 904 aa8.29□□□□□ -1.08
GYPB-214ENST00000513557 PDCD7Q8N8D1 485 aaKnown RBP8.27□□□□□ -1.09
GYPB-214ENST00000513557 TMC2Q8TDI7 906 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms