RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 TPRNQ4KMQ1 711 aa22.98■■□□□ 1.27
ARHGEF28-212ENST00000513042 RRP7BPQ9NSQ0 103 aa22.96■■□□□ 1.27
ARHGEF28-212ENST00000513042 TSPY4P0CV99 314 aa22.95■■□□□ 1.26
ARHGEF28-212ENST00000513042 TSPY10P0CW01 314 aa22.95■■□□□ 1.26
ARHGEF28-212ENST00000513042 CDK11BP21127 795 aaKnown RBP22.94■■□□□ 1.26
ARHGEF28-212ENST00000513042 MTUS2Q5JR59 1369 aa22.92■■□□□ 1.26
ARHGEF28-212ENST00000513042 NCLP19338 710 aaKnown RBP22.91■■□□□ 1.26
ARHGEF28-212ENST00000513042 EIF4G2P78344 907 aaKnown RBP eCLIP22.87■■□□□ 1.25
ARHGEF28-212ENST00000513042 BECN1Q14457 450 aa22.87■■□□□ 1.25
ARHGEF28-212ENST00000513042 DDRGK1Q96HY6 314 aa22.87■■□□□ 1.25
ARHGEF28-212ENST00000513042 TRIM44Q96DX7 344 aaPredicted RBP22.86■■□□□ 1.25
ARHGEF28-212ENST00000513042 RGL3Q3MIN7 710 aa22.83■■□□□ 1.24
ARHGEF28-212ENST00000513042 PPP1R15AO75807 674 aaPredicted RBP22.82■■□□□ 1.24
ARHGEF28-212ENST00000513042 KCNH8Q96L42 1107 aa22.8■■□□□ 1.24
ARHGEF28-212ENST00000513042 TULP1O00294 542 aaPredicted RBP22.79■■□□□ 1.24
ARHGEF28-212ENST00000513042 PPM1GO15355 546 aaPredicted RBP22.79■■□□□ 1.24
ARHGEF28-212ENST00000513042 CHMP7Q8WUX9 453 aaPredicted RBP22.77■■□□□ 1.24
ARHGEF28-212ENST00000513042 TAOK2Q9UL54 1235 aa22.75■■□□□ 1.23
ARHGEF28-212ENST00000513042 LAS1LQ9Y4W2 734 aaKnown RBP22.75■■□□□ 1.23
ARHGEF28-212ENST00000513042 GOLGA6L22H0YM25 854 aa22.74■■□□□ 1.23
ARHGEF28-212ENST00000513042 PTMAP06454 111 aaKnown RBP22.74■■□□□ 1.23
ARHGEF28-212ENST00000513042 SUPT16HQ9Y5B9 1047 aaKnown RBP22.74■■□□□ 1.23
ARHGEF28-212ENST00000513042 CLIP1P30622 1438 aa22.72■■□□□ 1.23
ARHGEF28-212ENST00000513042 NEUROD2Q15784 382 aa22.72■■□□□ 1.23
ARHGEF28-212ENST00000513042 FTSJ3Q8IY81 847 aaKnown RBP22.69■■□□□ 1.22
ARHGEF28-212ENST00000513042 RTN4Q9NQC3 1192 aaKnown RBP22.68■■□□□ 1.22
ARHGEF28-212ENST00000513042 DNTTIP2Q5QJE6 756 aaKnown RBP22.67■■□□□ 1.22
ARHGEF28-212ENST00000513042 CASC1Q6TDU7 716 aa22.67■■□□□ 1.22
ARHGEF28-212ENST00000513042 ZRSR1Q15695 479 aaKnown RBP22.66■■□□□ 1.22
ARHGEF28-212ENST00000513042 HAP1P54257 671 aaPredicted RBP22.66■■□□□ 1.22
ARHGEF28-212ENST00000513042 CFAP53Q96M91 514 aa22.65■■□□□ 1.22
ARHGEF28-212ENST00000513042 KNSTRNQ9Y448 316 aa22.65■■□□□ 1.22
ARHGEF28-212ENST00000513042 RGS3P49796 1198 aa22.62■■□□□ 1.21
ARHGEF28-212ENST00000513042 ZCCHC6Q5VYS8 1495 aaKnown RBP22.62■■□□□ 1.21
ARHGEF28-212ENST00000513042 TNNT2P45379 298 aaPredicted RBP22.61■■□□□ 1.21
ARHGEF28-212ENST00000513042 FRAT1Q92837 279 aaPredicted RBP22.59■■□□□ 1.21
ARHGEF28-212ENST00000513042 CARD11Q9BXL7 1154 aa22.59■■□□□ 1.21
ARHGEF28-212ENST00000513042 ANP32EQ9BTT0 268 aa22.59■■□□□ 1.21
ARHGEF28-212ENST00000513042 PLCB2Q00722 1185 aa22.59■■□□□ 1.21
ARHGEF28-212ENST00000513042 ARID4BQ4LE39 1312 aaPredicted RBP22.58■■□□□ 1.2
ARHGEF28-212ENST00000513042 NAP1L5Q96NT1 182 aaPredicted RBP22.58■■□□□ 1.2
ARHGEF28-212ENST00000513042 CC2D1BQ5T0F9 858 aaKnown RBP22.56■■□□□ 1.2
ARHGEF28-212ENST00000513042 MYO15BQ96JP2 1530 aa22.55■■□□□ 1.2
ARHGEF28-212ENST00000513042 MAPK8IP3Q9UPT6 1336 aa22.54■■□□□ 1.2
ARHGEF28-212ENST00000513042 PLEKHD1A6NEE1 506 aa22.53■■□□□ 1.2
ARHGEF28-212ENST00000513042 LMOD2Q6P5Q4 547 aa22.51■■□□□ 1.19
ARHGEF28-212ENST00000513042 RSF1Q96T23 1441 aaPredicted RBP22.51■■□□□ 1.19
ARHGEF28-212ENST00000513042 CEP162Q5TB80 1403 aa22.51■■□□□ 1.19
ARHGEF28-212ENST00000513042 SIN3AQ96ST3 1273 aa22.49■■□□□ 1.19
ARHGEF28-212ENST00000513042 HSP90AB1P08238 724 aaKnown RBP22.49■■□□□ 1.19
ARHGEF28-212ENST00000513042 GOLGA3Q08378 1498 aa22.47■■□□□ 1.19
ARHGEF28-212ENST00000513042 CDCA8Q53HL2 280 aa22.47■■□□□ 1.19
ARHGEF28-212ENST00000513042 NAP1L2Q9ULW6 460 aaPredicted RBP22.47■■□□□ 1.19
ARHGEF28-212ENST00000513042 OS9Q13438 667 aaPredicted RBP22.46■■□□□ 1.19
ARHGEF28-212ENST00000513042 NOP58Q9Y2X3 529 aaKnown RBP22.46■■□□□ 1.19
ARHGEF28-212ENST00000513042 CFDP1Q9UEE9 299 aaPredicted RBP22.45■■□□□ 1.18
ARHGEF28-212ENST00000513042 PPP4R2Q9NY27 417 aa22.44■■□□□ 1.18
ARHGEF28-212ENST00000513042 B4GALNT3Q6L9W6 998 aa22.44■■□□□ 1.18
ARHGEF28-212ENST00000513042 U2SURPO15042 1029 aaKnown RBP22.44■■□□□ 1.18
ARHGEF28-212ENST00000513042 POGKQ9P215 609 aa22.44■■□□□ 1.18
ARHGEF28-212ENST00000513042 SPRYD3Q8NCJ5 442 aa22.43■■□□□ 1.18
ARHGEF28-212ENST00000513042 NPHP1O15259 732 aa22.42■■□□□ 1.18
ARHGEF28-212ENST00000513042 NUDCQ9Y266 331 aa22.4■■□□□ 1.18
ARHGEF28-212ENST00000513042 FGD1P98174 961 aa22.39■■□□□ 1.18
ARHGEF28-212ENST00000513042 ERICH6BQ5W0A0 696 aa22.38■■□□□ 1.17
ARHGEF28-212ENST00000513042 KCNJ4P48050 445 aa22.36■■□□□ 1.17
ARHGEF28-212ENST00000513042 SOX12O15370 315 aa22.34■■□□□ 1.17
ARHGEF28-212ENST00000513042 GOLGA6L6A8MZA4 724 aa22.32■■□□□ 1.16
ARHGEF28-212ENST00000513042 CCDC180Q9P1Z9 1646 aa22.3■■□□□ 1.16
ARHGEF28-212ENST00000513042 HSCBQ8IWL3 235 aa22.28■■□□□ 1.16
ARHGEF28-212ENST00000513042 GOLGA2Q08379 1002 aa22.26■■□□□ 1.15
ARHGEF28-212ENST00000513042 DCAF11Q8TEB1 546 aa22.24■■□□□ 1.15
ARHGEF28-212ENST00000513042 SAFB2Q14151 953 aaKnown RBP eCLIP22.24■■□□□ 1.15
ARHGEF28-212ENST00000513042 GOLGA6L4A6NEF3 574 aa22.23■■□□□ 1.15
ARHGEF28-212ENST00000513042 AMER1Q5JTC6 1135 aaPredicted RBP22.22■■□□□ 1.15
ARHGEF28-212ENST00000513042 CLSTN1O94985 981 aa22.22■■□□□ 1.15
ARHGEF28-212ENST00000513042 NCBP3Q53F19 620 aaKnown RBP22.21■■□□□ 1.15
ARHGEF28-212ENST00000513042 APBB1O00213 710 aa22.21■■□□□ 1.15
ARHGEF28-212ENST00000513042 DRC7Q8IY82 874 aa22.2■■□□□ 1.15
ARHGEF28-212ENST00000513042 CHMP4BQ9H444 224 aaKnown RBP22.2■■□□□ 1.14
ARHGEF28-212ENST00000513042 TMF1P82094 1093 aa22.2■■□□□ 1.14
ARHGEF28-212ENST00000513042 MS4A1P11836 297 aa22.19■■□□□ 1.14
ARHGEF28-212ENST00000513042 WRNQ14191 1432 aaPredicted RBP eCLIP22.19■■□□□ 1.14
ARHGEF28-212ENST00000513042 SRPK2P78362 688 aaKnown RBP22.18■■□□□ 1.14
ARHGEF28-212ENST00000513042 DEKP35659 375 aaKnown RBP22.16■■□□□ 1.14
ARHGEF28-212ENST00000513042 PNNQ9H307 717 aaKnown RBP22.16■■□□□ 1.14
ARHGEF28-212ENST00000513042 EEA1Q15075 1411 aa22.16■■□□□ 1.14
ARHGEF28-212ENST00000513042 MSNP26038 577 aaKnown RBP22.16■■□□□ 1.14
ARHGEF28-212ENST00000513042 MLECQ14165 292 aa22.16■■□□□ 1.14
ARHGEF28-212ENST00000513042 MORC1Q86VD1 984 aa22.15■■□□□ 1.14
ARHGEF28-212ENST00000513042 EIF4G1Q04637 1599 aaKnown RBP22.14■■□□□ 1.14
ARHGEF28-212ENST00000513042 KIF27Q86VH2 1401 aa22.14■■□□□ 1.14
ARHGEF28-212ENST00000513042 ISY1Q9ULR0 285 aaKnown RBP22.14■■□□□ 1.13
ARHGEF28-212ENST00000513042 MCCP23508 829 aa22.13■■□□□ 1.13
ARHGEF28-212ENST00000513042 CHAF1AQ13111 956 aaPredicted RBP22.13■■□□□ 1.13
ARHGEF28-212ENST00000513042 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
ARHGEF28-212ENST00000513042 CCNB3Q8WWL7 1395 aa22.12■■□□□ 1.13
ARHGEF28-212ENST00000513042 NRDCO43847 1150 aa22.12■■□□□ 1.13
ARHGEF28-212ENST00000513042 TNIKQ9UKE5 1360 aa22.12■■□□□ 1.13
ARHGEF28-212ENST00000513042 ARID3AQ99856 593 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms