RNA–Protein interactions for RNA: ENST00000513013.5

SUB1-212, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 5

Gene SUB1, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-212ENST00000513013 CCDC61Q9Y6R9 512 aa9.16□□□□□ -0.94
SUB1-212ENST00000513013 MS4A3Q96HJ5 214 aa9.15□□□□□ -0.94
SUB1-212ENST00000513013 KIF12Q96FN5 646 aa9.12□□□□□ -0.95
SUB1-212ENST00000513013 ASTLQ6HA08 431 aaPredicted RBP9.11□□□□□ -0.95
SUB1-212ENST00000513013 RASEFQ8IZ41 740 aa9.11□□□□□ -0.95
SUB1-212ENST00000513013 C7P10643 843 aa9.1□□□□□ -0.95
SUB1-212ENST00000513013 SLC39A7Q92504 469 aa9.1□□□□□ -0.95
SUB1-212ENST00000513013 FAM212AQ96EL1 285 aa9.1□□□□□ -0.95
SUB1-212ENST00000513013 ATMINO43313 823 aaPredicted RBP9.08□□□□□ -0.96
SUB1-212ENST00000513013 SGIP1Q9BQI5 828 aa9.08□□□□□ -0.96
SUB1-212ENST00000513013 NUBP1P53384 320 aa9.06□□□□□ -0.96
SUB1-212ENST00000513013 MAP3K13O43283 966 aa9.05□□□□□ -0.96
SUB1-212ENST00000513013 TIE1P35590 1138 aa9.04□□□□□ -0.96
SUB1-212ENST00000513013 METRNQ9UJH8 293 aa9.04□□□□□ -0.96
SUB1-212ENST00000513013 PELP1Q8IZL8 1130 aaKnown RBP9.03□□□□□ -0.96
SUB1-212ENST00000513013 MAMSTRQ6ZN01 415 aa9.01□□□□□ -0.97
SUB1-212ENST00000513013 PCDHB13Q9Y5F0 798 aa9.01□□□□□ -0.97
SUB1-212ENST00000513013 KLHL34Q8N239 644 aa9□□□□□ -0.97
SUB1-212ENST00000513013 ATN1P54259 1190 aaPredicted RBP8.99□□□□□ -0.97
SUB1-212ENST00000513013 DCAF8Q5TAQ9 597 aa8.99□□□□□ -0.97
SUB1-212ENST00000513013 BMP2KQ9NSY1 1161 aaPredicted RBP8.99□□□□□ -0.97
SUB1-212ENST00000513013 VASPP50552 380 aaPredicted RBP8.98□□□□□ -0.97
SUB1-212ENST00000513013 TTLL13PA6NNM8 815 aa8.95□□□□□ -0.98
SUB1-212ENST00000513013 GSE1Q14687 1217 aa8.95□□□□□ -0.98
SUB1-212ENST00000513013 OTUD5Q96G74 571 aa8.95□□□□□ -0.98
SUB1-212ENST00000513013 POTEB2H3BUK9 544 aa8.94□□□□□ -0.98
SUB1-212ENST00000513013 IER5LQ5T953 404 aa8.94□□□□□ -0.98
SUB1-212ENST00000513013 SEC24BO95487 1268 aa8.93□□□□□ -0.98
SUB1-212ENST00000513013 SCUBE2Q9NQ36 999 aa8.93□□□□□ -0.98
SUB1-212ENST00000513013 IFNL1Q8IU54 200 aa8.92□□□□□ -0.98
SUB1-212ENST00000513013 TRPC6Q9Y210 931 aa8.92□□□□□ -0.98
SUB1-212ENST00000513013 TRIM35Q9UPQ4 493 aa8.9□□□□□ -0.98
SUB1-212ENST00000513013 TMEM106CQ9BVX2 250 aa8.89□□□□□ -0.99
SUB1-212ENST00000513013 PYGBP11216 843 aa8.88□□□□□ -0.99
SUB1-212ENST00000513013 ZNF467Q7Z7K2 595 aaPredicted RBP8.85□□□□□ -0.99
SUB1-212ENST00000513013 CHRM1P11229 460 aaPredicted RBP8.84□□□□□ -0.99
SUB1-212ENST00000513013 SPOCK2Q92563 424 aa8.84□□□□□ -0.99
SUB1-212ENST00000513013 PLCG2P16885 1265 aa8.83□□□□□ -1
SUB1-212ENST00000513013 POTEJP0CG39 1038 aa8.82□□□□□ -1
SUB1-212ENST00000513013 POTEFA5A3E0 1075 aa8.81□□□□□ -1
SUB1-212ENST00000513013 COLQQ9Y215 455 aaPredicted RBP8.81□□□□□ -1
SUB1-212ENST00000513013 PCDHB8Q9UN66 801 aa8.8□□□□□ -1
SUB1-212ENST00000513013 GOLGA2Q08379 1002 aa8.78□□□□□ -1
SUB1-212ENST00000513013 IFNLR1Q8IU57 520 aaPredicted RBP8.77□□□□□ -1.01
SUB1-212ENST00000513013 OCEL1Q9H607 264 aa8.77□□□□□ -1.01
SUB1-212ENST00000513013 CIZ1Q9ULV3 898 aaPredicted RBP8.77□□□□□ -1.01
SUB1-212ENST00000513013 TRIM41Q8WV44 630 aa8.75□□□□□ -1.01
SUB1-212ENST00000513013 IRX5P78411 483 aaPredicted RBP8.74□□□□□ -1.01
SUB1-212ENST00000513013 MKRN3Q13064 507 aaKnown RBP8.74□□□□□ -1.01
SUB1-212ENST00000513013 POTEMA6NI47 508 aa8.73□□□□□ -1.01
SUB1-212ENST00000513013 PCDH10Q9P2E7 1040 aa8.73□□□□□ -1.01
SUB1-212ENST00000513013 PSEN1P49768 467 aa8.72□□□□□ -1.01
SUB1-212ENST00000513013 PDAP1Q13442 181 aaKnown RBP8.72□□□□□ -1.01
SUB1-212ENST00000513013 POTEGQ6S5H5 508 aa8.72□□□□□ -1.01
SUB1-212ENST00000513013 FAM163AQ96GL9 167 aaPredicted RBP8.72□□□□□ -1.01
SUB1-212ENST00000513013 SLAIN1Q8ND83 568 aa8.7□□□□□ -1.02
SUB1-212ENST00000513013 AMER1Q5JTC6 1135 aaPredicted RBP8.69□□□□□ -1.02
SUB1-212ENST00000513013 L3MBTL3Q96JM7 780 aaPredicted RBP8.68□□□□□ -1.02
SUB1-212ENST00000513013 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.67□□□□□ -1.02
SUB1-212ENST00000513013 SNPHO15079 494 aa8.65□□□□□ -1.02
SUB1-212ENST00000513013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.65□□□□□ -1.02
SUB1-212ENST00000513013 PLSCR2Q9NRY7 297 aa8.64□□□□□ -1.03
SUB1-212ENST00000513013 SLC24A1O60721 1099 aa8.63□□□□□ -1.03
SUB1-212ENST00000513013 C3orf67Q6ZVT6 689 aa8.63□□□□□ -1.03
SUB1-212ENST00000513013 G3V3G9 751 aa8.61□□□□□ -1.03
SUB1-212ENST00000513013 PDCD7Q8N8D1 485 aaKnown RBP8.61□□□□□ -1.03
SUB1-212ENST00000513013 CABP2Q9NPB3 220 aa8.6□□□□□ -1.03
SUB1-212ENST00000513013 RTN4Q9NQC3 1192 aaKnown RBP8.6□□□□□ -1.03
SUB1-212ENST00000513013 LCE2DQ5TA82 110 aaPredicted RBP8.57□□□□□ -1.04
SUB1-212ENST00000513013 TMEM121BQ9BXQ6 578 aaPredicted RBP8.57□□□□□ -1.04
SUB1-212ENST00000513013 TAOK2Q9UL54 1235 aa8.57□□□□□ -1.04
SUB1-212ENST00000513013 ILDR1Q86SU0 546 aaPredicted RBP8.56□□□□□ -1.04
SUB1-212ENST00000513013 RIOK3O14730 519 aaKnown RBP8.55□□□□□ -1.04
SUB1-212ENST00000513013 ST18O60284 1047 aa8.53□□□□□ -1.04
SUB1-212ENST00000513013 VGFO15240 615 aaPredicted RBP8.52□□□□□ -1.05
SUB1-212ENST00000513013 BOLA1Q9Y3E2 137 aa8.51□□□□□ -1.05
SUB1-212ENST00000513013 SOX12O15370 315 aa8.48□□□□□ -1.05
SUB1-212ENST00000513013 EFCAB3Q8N7B9 438 aa8.48□□□□□ -1.05
SUB1-212ENST00000513013 CDAN1Q8IWY9 1227 aa8.47□□□□□ -1.05
SUB1-212ENST00000513013 DPY19L2Q6NUT2 758 aa8.46□□□□□ -1.06
SUB1-212ENST00000513013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.45□□□□□ -1.06
SUB1-212ENST00000513013 ZFP91Q96JP5 570 aaPredicted RBP8.45□□□□□ -1.06
SUB1-212ENST00000513013 RNF25Q96BH1 459 aaPredicted RBP8.42□□□□□ -1.06
SUB1-212ENST00000513013 EMP3P54852 163 aa8.4□□□□□ -1.06
SUB1-212ENST00000513013 RIMBP2O15034 1052 aa8.39□□□□□ -1.07
SUB1-212ENST00000513013 ECM2O94769 699 aaPredicted RBP8.39□□□□□ -1.07
SUB1-212ENST00000513013 NLRP6P59044 892 aa8.39□□□□□ -1.07
SUB1-212ENST00000513013 DOK7Q18PE1 504 aa8.39□□□□□ -1.07
SUB1-212ENST00000513013 ZNF710Q8N1W2 664 aa8.39□□□□□ -1.07
SUB1-212ENST00000513013 MARVELD3Q96A59 401 aa8.38□□□□□ -1.07
SUB1-212ENST00000513013 MICALL2Q8IY33 904 aa8.37□□□□□ -1.07
SUB1-212ENST00000513013 BCL11BQ9C0K0 894 aaPredicted RBP8.37□□□□□ -1.07
SUB1-212ENST00000513013 STK24Q9Y6E0 443 aa8.36□□□□□ -1.07
SUB1-212ENST00000513013 STK25O00506 426 aa8.35□□□□□ -1.07
SUB1-212ENST00000513013 PHF8Q9UPP1 1060 aa8.35□□□□□ -1.07
SUB1-212ENST00000513013 ZSWIM6Q9HCJ5 1215 aa8.32□□□□□ -1.08
SUB1-212ENST00000513013 HOXB3P14651 431 aaPredicted RBP8.31□□□□□ -1.08
SUB1-212ENST00000513013 HOXB1P14653 301 aaPredicted RBP8.31□□□□□ -1.08
SUB1-212ENST00000513013 MS4A4AQ96JQ5 239 aa8.31□□□□□ -1.08
SUB1-212ENST00000513013 FAM205CA6NFA0 338 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms