RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.35□□□□□ -1.55
PVT1-202ENST00000512617 HNRNPUL2Q1KMD3 747 aaKnown RBP5.35□□□□□ -1.55
PVT1-202ENST00000512617 SAMD1Q6SPF0 538 aaPredicted RBP5.35□□□□□ -1.55
PVT1-202ENST00000512617 HS6ST3Q8IZP7 471 aa5.35□□□□□ -1.55
PVT1-202ENST00000512617 SHROOM4Q9ULL8 1493 aa5.34□□□□□ -1.55
PVT1-202ENST00000512617 HMGB1P09429 215 aaKnown RBP5.34□□□□□ -1.55
PVT1-202ENST00000512617 ZNF219Q9P2Y4 722 aaPredicted RBP5.32□□□□□ -1.56
PVT1-202ENST00000512617 CDK11BP21127 795 aaKnown RBP5.31□□□□□ -1.56
PVT1-202ENST00000512617 CDK11AQ9UQ88 783 aaPredicted RBP5.31□□□□□ -1.56
PVT1-202ENST00000512617 NECTIN2Q92692 538 aa5.3□□□□□ -1.56
PVT1-202ENST00000512617 C1orf115Q9H7X2 142 aa5.3□□□□□ -1.56
PVT1-202ENST00000512617 SLC24A3Q9HC58 644 aa5.3□□□□□ -1.56
PVT1-202ENST00000512617 CIZ1Q9ULV3 898 aaPredicted RBP5.29□□□□□ -1.56
PVT1-202ENST00000512617 IGSF3O75054 1194 aa5.28□□□□□ -1.56
PVT1-202ENST00000512617 HSP90B1P14625 803 aaKnown RBP5.28□□□□□ -1.56
PVT1-202ENST00000512617 KCTD17Q8N5Z5 321 aa5.28□□□□□ -1.56
PVT1-202ENST00000512617 ZC3H15Q8WU90 426 aaKnown RBP5.28□□□□□ -1.56
PVT1-202ENST00000512617 GTPBP6O43824 516 aaPredicted RBP5.27□□□□□ -1.57
PVT1-202ENST00000512617 MKRN4PQ13434 485 aaPredicted RBP5.27□□□□□ -1.57
PVT1-202ENST00000512617 ARID3CA6NKF2 412 aa5.26□□□□□ -1.57
PVT1-202ENST00000512617 APBB1O00213 710 aa5.26□□□□□ -1.57
PVT1-202ENST00000512617 NKX1-1Q15270 411 aaPredicted RBP5.26□□□□□ -1.57
PVT1-202ENST00000512617 PLCD3Q8N3E9 789 aa5.26□□□□□ -1.57
PVT1-202ENST00000512617 RAD21O60216 631 aa5.25□□□□□ -1.57
PVT1-202ENST00000512617 TRIM41Q8WV44 630 aa5.25□□□□□ -1.57
PVT1-202ENST00000512617 KCNV2Q8TDN2 545 aa5.23□□□□□ -1.57
PVT1-202ENST00000512617 WDR70Q9NW82 654 aa5.22□□□□□ -1.57
PVT1-202ENST00000512617 RGS22Q8NE09 1264 aa5.2□□□□□ -1.58
PVT1-202ENST00000512617 PUS7Q96PZ0 661 aaKnown RBP5.2□□□□□ -1.58
PVT1-202ENST00000512617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.2□□□□□ -1.582e-7■□□□□ 9.9
PVT1-202ENST00000512617 STAG3Q9UJ98 1225 aa5.2□□□□□ -1.58
PVT1-202ENST00000512617 IL27Q8NEV9 243 aa5.19□□□□□ -1.58
PVT1-202ENST00000512617 RBM25P49756 843 aaKnown RBP5.18□□□□□ -1.58
PVT1-202ENST00000512617 TMCO4Q5TGY1 634 aa5.18□□□□□ -1.58
PVT1-202ENST00000512617 AEBP1Q8IUX7 1158 aa5.18□□□□□ -1.58
PVT1-202ENST00000512617 CCDC82Q8N4S0 544 aa5.18□□□□□ -1.58
PVT1-202ENST00000512617 RYDENQ9NUL5 291 aaKnown RBP5.18□□□□□ -1.58
PVT1-202ENST00000512617 MTMR7Q9Y216 660 aa5.18□□□□□ -1.58
PVT1-202ENST00000512617 DCAF8L1A6NGE4 600 aa5.17□□□□□ -1.58
PVT1-202ENST00000512617 MIER1Q8N108 512 aa5.17□□□□□ -1.58
PVT1-202ENST00000512617 TRAIPQ9BWF2 469 aa5.17□□□□□ -1.58
PVT1-202ENST00000512617 ZMYND10O75800 440 aa5.16□□□□□ -1.58
PVT1-202ENST00000512617 MKRN3Q13064 507 aaKnown RBP5.16□□□□□ -1.58
PVT1-202ENST00000512617 RNF25Q96BH1 459 aaPredicted RBP5.16□□□□□ -1.58
PVT1-202ENST00000512617 CHMP4AQ9BY43 222 aa5.16□□□□□ -1.58
PVT1-202ENST00000512617 GPBP1L1Q9HC44 474 aaPredicted RBP5.16□□□□□ -1.58
PVT1-202ENST00000512617 U3KPZ7 1027 aaPredicted RBP5.16□□□□□ -1.58
PVT1-202ENST00000512617 STK25O00506 426 aa5.15□□□□□ -1.59
PVT1-202ENST00000512617 RNF39Q9H2S5 420 aa5.15□□□□□ -1.59
PVT1-202ENST00000512617 MFAP1P55081 439 aaKnown RBP5.14□□□□□ -1.59
PVT1-202ENST00000512617 FLIIQ13045 1269 aa5.14□□□□□ -1.59
PVT1-202ENST00000512617 FOXD4L5Q5VV16 416 aaPredicted RBP5.14□□□□□ -1.59
PVT1-202ENST00000512617 FOXD4L4Q8WXT5 416 aaPredicted RBP5.14□□□□□ -1.59
PVT1-202ENST00000512617 RIOK3O14730 519 aaKnown RBP5.13□□□□□ -1.59
PVT1-202ENST00000512617 PLEKHG5O94827 1062 aa5.13□□□□□ -1.59
PVT1-202ENST00000512617 CACNB1Q02641 598 aaPredicted RBP5.13□□□□□ -1.59
PVT1-202ENST00000512617 ZBTB47Q9UFB7 747 aaPredicted RBP5.13□□□□□ -1.59
PVT1-202ENST00000512617 E9PSI1 815 aa5.12□□□□□ -1.59
PVT1-202ENST00000512617 AK7Q96M32 723 aa5.12□□□□□ -1.59
PVT1-202ENST00000512617 KDM4CQ9H3R0 1056 aa5.12□□□□□ -1.59
PVT1-202ENST00000512617 BARGINQ6ZT62 677 aa5.11□□□□□ -1.59
PVT1-202ENST00000512617 ARHGEF1Q92888 912 aaKnown RBP5.11□□□□□ -1.59
PVT1-202ENST00000512617 ZNF428Q96B54 188 aa5.11□□□□□ -1.59
PVT1-202ENST00000512617 GZF1Q9H116 711 aaPredicted RBP5.11□□□□□ -1.59
PVT1-202ENST00000512617 TESPA1A2RU30 521 aaPredicted RBP5.1□□□□□ -1.59
PVT1-202ENST00000512617 C1QBPQ07021 282 aaKnown RBP5.1□□□□□ -1.59
PVT1-202ENST00000512617 POLA2Q14181 598 aa5.1□□□□□ -1.59
PVT1-202ENST00000512617 SEMA3EO15041 775 aa5.09□□□□□ -1.59
PVT1-202ENST00000512617 VGFO15240 615 aaPredicted RBP5.09□□□□□ -1.59
PVT1-202ENST00000512617 TRAK2O60296 914 aa5.09□□□□□ -1.59
PVT1-202ENST00000512617 GSE1Q14687 1217 aa5.09□□□□□ -1.59
PVT1-202ENST00000512617 USP35Q9P2H5 1018 aa5.09□□□□□ -1.59
PVT1-202ENST00000512617 A6NJR5 290 aa5.08□□□□□ -1.6
PVT1-202ENST00000512617 SMYD5Q6GMV2 418 aa5.08□□□□□ -1.6
PVT1-202ENST00000512617 CADPS2Q86UW7 1296 aa5.07□□□□□ -1.6
PVT1-202ENST00000512617 KRI1Q8N9T8 703 aaKnown RBP5.07□□□□□ -1.6
PVT1-202ENST00000512617 FBXW7Q969H0 707 aa5.07□□□□□ -1.6
PVT1-202ENST00000512617 STK24Q9Y6E0 443 aa5.07□□□□□ -1.6
PVT1-202ENST00000512617 ZNF316A6NFI3 1004 aaPredicted RBP5.06□□□□□ -1.6
PVT1-202ENST00000512617 CCDC97Q96F63 343 aaPredicted RBP5.06□□□□□ -1.6
PVT1-202ENST00000512617 CLUAP1Q96AJ1 413 aa5.05□□□□□ -1.6
PVT1-202ENST00000512617 POLR3GLQ9BT43 218 aa5.05□□□□□ -1.6
PVT1-202ENST00000512617 BCL11BQ9C0K0 894 aaPredicted RBP5.05□□□□□ -1.6
PVT1-202ENST00000512617 PDE4DQ08499 809 aa5.04□□□□□ -1.6
PVT1-202ENST00000512617 RSPH4AQ5TD94 716 aa5.04□□□□□ -1.6
PVT1-202ENST00000512617 SERPINA10Q9UK55 444 aa5.04□□□□□ -1.6
PVT1-202ENST00000512617 E2F4Q16254 413 aa5.03□□□□□ -1.6
PVT1-202ENST00000512617 RETREG2Q8NC44 543 aa5.03□□□□□ -1.6
PVT1-202ENST00000512617 TRIM66O15016 1216 aa5.02□□□□□ -1.61
PVT1-202ENST00000512617 BRD2P25440 801 aaKnown RBP5.02□□□□□ -1.61
PVT1-202ENST00000512617 FAM117AQ9C073 453 aa5.02□□□□□ -1.61
PVT1-202ENST00000512617 ZNF777Q9ULD5 760 aaPredicted RBP5.02□□□□□ -1.61
PVT1-202ENST00000512617 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.01□□□□□ -1.61
PVT1-202ENST00000512617 ONECUT3O60422 494 aaPredicted RBP5.01□□□□□ -1.61
PVT1-202ENST00000512617 ZFP91Q96JP5 570 aaPredicted RBP5.01□□□□□ -1.61
PVT1-202ENST00000512617 SGIP1Q9BQI5 828 aa5.01□□□□□ -1.61
PVT1-202ENST00000512617 MYT1LQ9UL68 1186 aa5.01□□□□□ -1.61
PVT1-202ENST00000512617 PATL2C9JE40 543 aaKnown RBP5□□□□□ -1.61
PVT1-202ENST00000512617 IRF5Q13568 498 aa5□□□□□ -1.61
PVT1-202ENST00000512617 DCAF8Q5TAQ9 597 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms