RNA–Protein interactions for RNA: ENST00000512513.2

TTC39CP1-201, Transcript of tetratricopeptide repeat domain 39C pseudogene 1, humanhuman

BASIC

Gene TTC39CP1, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CP1-201ENST00000512513 NUBP1P53384 320 aa9.69□□□□□ -0.86
TTC39CP1-201ENST00000512513 FAM212AQ96EL1 285 aa9.69□□□□□ -0.86
TTC39CP1-201ENST00000512513 CCDC61Q9Y6R9 512 aa9.67□□□□□ -0.86
TTC39CP1-201ENST00000512513 DCAF8Q5TAQ9 597 aa9.65□□□□□ -0.86
TTC39CP1-201ENST00000512513 GALR2O43603 387 aaPredicted RBP9.63□□□□□ -0.87
TTC39CP1-201ENST00000512513 GSE1Q14687 1217 aa9.61□□□□□ -0.87
TTC39CP1-201ENST00000512513 KIF12Q96FN5 646 aa9.61□□□□□ -0.87
TTC39CP1-201ENST00000512513 SPOCK2Q92563 424 aa9.6□□□□□ -0.87
TTC39CP1-201ENST00000512513 IFNLR1Q8IU57 520 aaPredicted RBP9.59□□□□□ -0.87
TTC39CP1-201ENST00000512513 MS4A3Q96HJ5 214 aa9.58□□□□□ -0.88
TTC39CP1-201ENST00000512513 SGIP1Q9BQI5 828 aa9.58□□□□□ -0.88
TTC39CP1-201ENST00000512513 MAP3K13O43283 966 aa9.57□□□□□ -0.88
TTC39CP1-201ENST00000512513 POTEIP0CG38 1075 aa9.55□□□□□ -0.88
TTC39CP1-201ENST00000512513 PCDHB13Q9Y5F0 798 aa9.54□□□□□ -0.88
TTC39CP1-201ENST00000512513 CIZ1Q9ULV3 898 aaPredicted RBP9.51□□□□□ -0.89
TTC39CP1-201ENST00000512513 PYGBP11216 843 aa9.5□□□□□ -0.89
TTC39CP1-201ENST00000512513 TIE1P35590 1138 aa9.48□□□□□ -0.89
TTC39CP1-201ENST00000512513 ASTLQ6HA08 431 aaPredicted RBP9.48□□□□□ -0.89
TTC39CP1-201ENST00000512513 ATMINO43313 823 aaPredicted RBP9.47□□□□□ -0.89
TTC39CP1-201ENST00000512513 CHRM1P11229 460 aaPredicted RBP9.47□□□□□ -0.89
TTC39CP1-201ENST00000512513 LHX8Q68G74 356 aa9.45□□□□□ -0.9
TTC39CP1-201ENST00000512513 IFNL1Q8IU54 200 aa9.45□□□□□ -0.9
TTC39CP1-201ENST00000512513 C7P10643 843 aa9.44□□□□□ -0.9
TTC39CP1-201ENST00000512513 ZNF467Q7Z7K2 595 aaPredicted RBP9.44□□□□□ -0.9
TTC39CP1-201ENST00000512513 SLC39A7Q92504 469 aa9.44□□□□□ -0.9
TTC39CP1-201ENST00000512513 TRIM41Q8WV44 630 aa9.43□□□□□ -0.9
TTC39CP1-201ENST00000512513 BMP2KQ9NSY1 1161 aaPredicted RBP9.43□□□□□ -0.9
TTC39CP1-201ENST00000512513 ATN1P54259 1190 aaPredicted RBP9.41□□□□□ -0.9
TTC39CP1-201ENST00000512513 TTLL13PA6NNM8 815 aa9.4□□□□□ -0.9
TTC39CP1-201ENST00000512513 PELP1Q8IZL8 1130 aaKnown RBP9.4□□□□□ -0.9
TTC39CP1-201ENST00000512513 TRPC6Q9Y210 931 aa9.4□□□□□ -0.9
TTC39CP1-201ENST00000512513 TMEM106CQ9BVX2 250 aa9.39□□□□□ -0.91
TTC39CP1-201ENST00000512513 METRNQ9UJH8 293 aa9.38□□□□□ -0.91
TTC39CP1-201ENST00000512513 PCDHB8Q9UN66 801 aa9.38□□□□□ -0.91
TTC39CP1-201ENST00000512513 TRIM35Q9UPQ4 493 aa9.35□□□□□ -0.91
TTC39CP1-201ENST00000512513 SEC24BO95487 1268 aa9.34□□□□□ -0.91
TTC39CP1-201ENST00000512513 IER5LQ5T953 404 aa9.34□□□□□ -0.91
TTC39CP1-201ENST00000512513 PSEN1P49768 467 aa9.31□□□□□ -0.92
TTC39CP1-201ENST00000512513 GOLGA2Q08379 1002 aa9.31□□□□□ -0.92
TTC39CP1-201ENST00000512513 PDAP1Q13442 181 aaKnown RBP9.31□□□□□ -0.92
TTC39CP1-201ENST00000512513 MAMSTRQ6ZN01 415 aa9.28□□□□□ -0.92
TTC39CP1-201ENST00000512513 TAOK2Q9UL54 1235 aa9.27□□□□□ -0.93
TTC39CP1-201ENST00000512513 MKRN3Q13064 507 aaKnown RBP9.26□□□□□ -0.93
TTC39CP1-201ENST00000512513 PLCG2P16885 1265 aa9.25□□□□□ -0.93
TTC39CP1-201ENST00000512513 POTEB2H3BUK9 544 aa9.24□□□□□ -0.93
TTC39CP1-201ENST00000512513 RIOK3O14730 519 aaKnown RBP9.24□□□□□ -0.93
TTC39CP1-201ENST00000512513 OCEL1Q9H607 264 aa9.23□□□□□ -0.93
TTC39CP1-201ENST00000512513 ECM2O94769 699 aaPredicted RBP9.22□□□□□ -0.93
TTC39CP1-201ENST00000512513 SCUBE2Q9NQ36 999 aa9.22□□□□□ -0.93
TTC39CP1-201ENST00000512513 COLQQ9Y215 455 aaPredicted RBP9.22□□□□□ -0.93
TTC39CP1-201ENST00000512513 POTEFA5A3E0 1075 aa9.2□□□□□ -0.94
TTC39CP1-201ENST00000512513 VGFO15240 615 aaPredicted RBP9.2□□□□□ -0.94
TTC39CP1-201ENST00000512513 IRX5P78411 483 aaPredicted RBP9.19□□□□□ -0.94
TTC39CP1-201ENST00000512513 OTUD5Q96G74 571 aa9.19□□□□□ -0.94
TTC39CP1-201ENST00000512513 CABP2Q9NPB3 220 aa9.18□□□□□ -0.94
TTC39CP1-201ENST00000512513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.17□□□□□ -0.94
TTC39CP1-201ENST00000512513 PKD2Q13563 968 aa9.15□□□□□ -0.94
TTC39CP1-201ENST00000512513 POTEJP0CG39 1038 aa9.14□□□□□ -0.95
TTC39CP1-201ENST00000512513 RNF25Q96BH1 459 aaPredicted RBP9.14□□□□□ -0.95
TTC39CP1-201ENST00000512513 L3MBTL3Q96JM7 780 aaPredicted RBP9.13□□□□□ -0.95
TTC39CP1-201ENST00000512513 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.12□□□□□ -0.95
TTC39CP1-201ENST00000512513 ZFP91Q96JP5 570 aaPredicted RBP9.12□□□□□ -0.95
TTC39CP1-201ENST00000512513 G3V3G9 751 aa9.1□□□□□ -0.95
TTC39CP1-201ENST00000512513 SOX12O15370 315 aa9.09□□□□□ -0.95
TTC39CP1-201ENST00000512513 EFCAB3Q8N7B9 438 aa9.08□□□□□ -0.96
TTC39CP1-201ENST00000512513 PDCD7Q8N8D1 485 aaKnown RBP9.07□□□□□ -0.96
TTC39CP1-201ENST00000512513 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.07□□□□□ -0.96
TTC39CP1-201ENST00000512513 STK25O00506 426 aa9.06□□□□□ -0.96
TTC39CP1-201ENST00000512513 RGL2O15211 777 aa9.06□□□□□ -0.96
TTC39CP1-201ENST00000512513 ILDR1Q86SU0 546 aaPredicted RBP9.06□□□□□ -0.96
TTC39CP1-201ENST00000512513 BCL11BQ9C0K0 894 aaPredicted RBP9.06□□□□□ -0.96
TTC39CP1-201ENST00000512513 STK24Q9Y6E0 443 aa9.06□□□□□ -0.96
TTC39CP1-201ENST00000512513 SLAIN1Q8ND83 568 aa9.05□□□□□ -0.96
TTC39CP1-201ENST00000512513 C3orf67Q6ZVT6 689 aa9.04□□□□□ -0.96
TTC39CP1-201ENST00000512513 BOLA1Q9Y3E2 137 aa9.01□□□□□ -0.97
TTC39CP1-201ENST00000512513 NLRP6P59044 892 aa9□□□□□ -0.97
TTC39CP1-201ENST00000512513 DPY19L2Q6NUT2 758 aa9□□□□□ -0.97
TTC39CP1-201ENST00000512513 SNPHO15079 494 aa8.98□□□□□ -0.97
TTC39CP1-201ENST00000512513 FAM163AQ96GL9 167 aaPredicted RBP8.97□□□□□ -0.97
TTC39CP1-201ENST00000512513 PHF8Q9UPP1 1060 aa8.97□□□□□ -0.97
TTC39CP1-201ENST00000512513 CHGAP10645 457 aaKnown RBP8.92□□□□□ -0.98
TTC39CP1-201ENST00000512513 TMEM121BQ9BXQ6 578 aaPredicted RBP8.92□□□□□ -0.98
TTC39CP1-201ENST00000512513 HS6ST3Q8IZP7 471 aa8.91□□□□□ -0.98
TTC39CP1-201ENST00000512513 FBXO22Q8NEZ5 403 aa8.9□□□□□ -0.98
TTC39CP1-201ENST00000512513 MS4A4AQ96JQ5 239 aa8.9□□□□□ -0.98
TTC39CP1-201ENST00000512513 MFRPQ9BY79 579 aa8.9□□□□□ -0.98
TTC39CP1-201ENST00000512513 MICALL2Q8IY33 904 aa8.89□□□□□ -0.99
TTC39CP1-201ENST00000512513 DCAF8L2P0C7V8 631 aa8.88□□□□□ -0.99
TTC39CP1-201ENST00000512513 RYDENQ9NUL5 291 aaKnown RBP8.87□□□□□ -0.99
TTC39CP1-201ENST00000512513 POTEMA6NI47 508 aa8.86□□□□□ -0.99
TTC39CP1-201ENST00000512513 AMER1Q5JTC6 1135 aaPredicted RBP8.85□□□□□ -0.99
TTC39CP1-201ENST00000512513 POTEGQ6S5H5 508 aa8.85□□□□□ -0.99
TTC39CP1-201ENST00000512513 ST18O60284 1047 aa8.82□□□□□ -1
TTC39CP1-201ENST00000512513 DNAJC5Q9H3Z4 198 aa8.82□□□□□ -1
TTC39CP1-201ENST00000512513 PCDH10Q9P2E7 1040 aa8.82□□□□□ -1
TTC39CP1-201ENST00000512513 DOK7Q18PE1 504 aa8.8□□□□□ -1
TTC39CP1-201ENST00000512513 RIMBP2O15034 1052 aa8.79□□□□□ -1
TTC39CP1-201ENST00000512513 ZNF710Q8N1W2 664 aa8.79□□□□□ -1
TTC39CP1-201ENST00000512513 LCE2DQ5TA82 110 aaPredicted RBP8.78□□□□□ -1
TTC39CP1-201ENST00000512513 TMEM92Q6UXU6 159 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms