RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 AKT1S1Q96B36 256 aa12.2□□□□□ -0.46
HMGB1P47-201ENST00000511281 RBM42Q9BTD8 480 aaKnown RBP12.19□□□□□ -0.46
HMGB1P47-201ENST00000511281 MNX1P50219 401 aaPredicted RBP12.14□□□□□ -0.47
HMGB1P47-201ENST00000511281 CREBZFQ9NS37 354 aa12.13□□□□□ -0.47
HMGB1P47-201ENST00000511281 RIOK3O14730 519 aaKnown RBP12.12□□□□□ -0.47
HMGB1P47-201ENST00000511281 CHRM1P11229 460 aaPredicted RBP12.11□□□□□ -0.47
HMGB1P47-201ENST00000511281 PRKCSHP14314 528 aaPredicted RBP12.1□□□□□ -0.47
HMGB1P47-201ENST00000511281 FAM212AQ96EL1 285 aa12.08□□□□□ -0.48
HMGB1P47-201ENST00000511281 DCAF8Q5TAQ9 597 aa12.07□□□□□ -0.48
HMGB1P47-201ENST00000511281 SGIP1Q9BQI5 828 aa12.07□□□□□ -0.48
HMGB1P47-201ENST00000511281 PRR29P0C7W0 189 aa12.06□□□□□ -0.48
HMGB1P47-201ENST00000511281 VGFO15240 615 aaPredicted RBP12.05□□□□□ -0.48
HMGB1P47-201ENST00000511281 NKX1-1Q15270 411 aaPredicted RBP12.05□□□□□ -0.48
HMGB1P47-201ENST00000511281 REM2Q8IYK8 340 aaPredicted RBP12.04□□□□□ -0.48
HMGB1P47-201ENST00000511281 GTPBP6O43824 516 aaPredicted RBP12.02□□□□□ -0.49
HMGB1P47-201ENST00000511281 TPRNQ4KMQ1 711 aa12□□□□□ -0.49
HMGB1P47-201ENST00000511281 CLEC11AQ9Y240 323 aa12□□□□□ -0.49
HMGB1P47-201ENST00000511281 RASEFQ8IZ41 740 aa11.98□□□□□ -0.49
HMGB1P47-201ENST00000511281 STK25O00506 426 aa11.95□□□□□ -0.5
HMGB1P47-201ENST00000511281 RYDENQ9NUL5 291 aaKnown RBP11.93□□□□□ -0.5
HMGB1P47-201ENST00000511281 NBR1Q14596 966 aa11.9□□□□□ -0.5
HMGB1P47-201ENST00000511281 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.89□□□□□ -0.51
HMGB1P47-201ENST00000511281 ZFP91Q96JP5 570 aaPredicted RBP11.89□□□□□ -0.51
HMGB1P47-201ENST00000511281 PITPNM1O00562 1244 aa11.88□□□□□ -0.51
HMGB1P47-201ENST00000511281 BCL11BQ9C0K0 894 aaPredicted RBP11.87□□□□□ -0.51
HMGB1P47-201ENST00000511281 STK24Q9Y6E0 443 aa11.84□□□□□ -0.51
HMGB1P47-201ENST00000511281 PYGBP11216 843 aa11.83□□□□□ -0.52
HMGB1P47-201ENST00000511281 ZNF467Q7Z7K2 595 aaPredicted RBP11.78□□□□□ -0.52
HMGB1P47-201ENST00000511281 PDAP1Q13442 181 aaKnown RBP11.71□□□□□ -0.53
HMGB1P47-201ENST00000511281 FARP1Q9Y4F1 1045 aaPredicted RBP11.71□□□□□ -0.53
HMGB1P47-201ENST00000511281 P3H3Q8IVL6 736 aa11.7□□□□□ -0.54
HMGB1P47-201ENST00000511281 CCDC61Q9Y6R9 512 aa11.67□□□□□ -0.54
HMGB1P47-201ENST00000511281 CHADLQ6NUI6 762 aa11.66□□□□□ -0.54
HMGB1P47-201ENST00000511281 ZNF579Q8NAF0 562 aaKnown RBP11.66□□□□□ -0.54
HMGB1P47-201ENST00000511281 TSPYL2Q9H2G4 693 aaPredicted RBP11.66□□□□□ -0.54
HMGB1P47-201ENST00000511281 PSEN1P49768 467 aa11.6□□□□□ -0.55
HMGB1P47-201ENST00000511281 CADPS2Q86UW7 1296 aa11.6□□□□□ -0.55
HMGB1P47-201ENST00000511281 MFRPQ9BY79 579 aa11.6□□□□□ -0.55
HMGB1P47-201ENST00000511281 PCDHB8Q9UN66 801 aa11.6□□□□□ -0.55
HMGB1P47-201ENST00000511281 PCDHB13Q9Y5F0 798 aa11.6□□□□□ -0.55
HMGB1P47-201ENST00000511281 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.55
HMGB1P47-201ENST00000511281 KCNV2Q8TDN2 545 aa11.56□□□□□ -0.56
HMGB1P47-201ENST00000511281 PRKAR2AP13861 404 aaKnown RBP11.55□□□□□ -0.56
HMGB1P47-201ENST00000511281 WDR70Q9NW82 654 aa11.55□□□□□ -0.56
HMGB1P47-201ENST00000511281 FBXO22Q8NEZ5 403 aa11.52□□□□□ -0.57
HMGB1P47-201ENST00000511281 SOX12O15370 315 aa11.51□□□□□ -0.57
HMGB1P47-201ENST00000511281 IFNL1Q8IU54 200 aa11.5□□□□□ -0.57
HMGB1P47-201ENST00000511281 PAK3O75914 559 aaPredicted RBP11.49□□□□□ -0.57
HMGB1P47-201ENST00000511281 KIF12Q96FN5 646 aa11.49□□□□□ -0.57
HMGB1P47-201ENST00000511281 NLRP6P59044 892 aa11.48□□□□□ -0.57
HMGB1P47-201ENST00000511281 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.48□□□□□ -0.57
HMGB1P47-201ENST00000511281 ARHGEF1Q92888 912 aaKnown RBP11.47□□□□□ -0.57
HMGB1P47-201ENST00000511281 MAP3K13O43283 966 aa11.45□□□□□ -0.58
HMGB1P47-201ENST00000511281 PPP1R37O75864 691 aa11.45□□□□□ -0.58
HMGB1P47-201ENST00000511281 EFCAB3Q8N7B9 438 aa11.44□□□□□ -0.58
HMGB1P47-201ENST00000511281 LMOD2Q6P5Q4 547 aa11.43□□□□□ -0.58
HMGB1P47-201ENST00000511281 CABP2Q9NPB3 220 aa11.41□□□□□ -0.58
HMGB1P47-201ENST00000511281 PHF8Q9UPP1 1060 aa11.4□□□□□ -0.58
HMGB1P47-201ENST00000511281 E2F4Q16254 413 aa11.39□□□□□ -0.59
HMGB1P47-201ENST00000511281 PIP4P2Q8N4L2 257 aa11.39□□□□□ -0.59
HMGB1P47-201ENST00000511281 TMEM132AQ24JP5 1023 aa11.38□□□□□ -0.59
HMGB1P47-201ENST00000511281 CHRDL2Q6WN34 429 aa11.37□□□□□ -0.59
HMGB1P47-201ENST00000511281 TULP1O00294 542 aaPredicted RBP11.36□□□□□ -0.59
HMGB1P47-201ENST00000511281 ARIH1Q9Y4X5 557 aaPredicted RBP11.36□□□□□ -0.59
HMGB1P47-201ENST00000511281 MFSD10Q14728 455 aa11.35□□□□□ -0.59
HMGB1P47-201ENST00000511281 TESPA1A2RU30 521 aaPredicted RBP11.34□□□□□ -0.59
HMGB1P47-201ENST00000511281 NCKAP5LQ9HCH0 1330 aa11.34□□□□□ -0.59
HMGB1P47-201ENST00000511281 MS4A4AQ96JQ5 239 aa11.33□□□□□ -0.6
HMGB1P47-201ENST00000511281 CRISPLD2Q9H0B8 497 aa11.31□□□□□ -0.6
HMGB1P47-201ENST00000511281 GTF3C3Q9Y5Q9 886 aa11.31□□□□□ -0.6
HMGB1P47-201ENST00000511281 ERICH6Q7L0X2 663 aa11.3□□□□□ -0.6
HMGB1P47-201ENST00000511281 PDE4AP27815 886 aa11.29□□□□□ -0.6
HMGB1P47-201ENST00000511281 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
HMGB1P47-201ENST00000511281 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.61
HMGB1P47-201ENST00000511281 CAMK2BQ13554 666 aa11.27□□□□□ -0.61
HMGB1P47-201ENST00000511281 ZC3H15Q8WU90 426 aaKnown RBP11.26□□□□□ -0.61
HMGB1P47-201ENST00000511281 TIMELESSQ9UNS1 1208 aa11.26□□□□□ -0.61
HMGB1P47-201ENST00000511281 SEMA3EO15041 775 aa11.25□□□□□ -0.61
HMGB1P47-201ENST00000511281 ILDR1Q86SU0 546 aaPredicted RBP11.25□□□□□ -0.61
HMGB1P47-201ENST00000511281 PHF12Q96QT6 1004 aa11.25□□□□□ -0.61
HMGB1P47-201ENST00000511281 LARP6Q9BRS8 491 aaKnown RBP11.24□□□□□ -0.61
HMGB1P47-201ENST00000511281 DDX27Q96GQ7 796 aaKnown RBP11.22□□□□□ -0.61
HMGB1P47-201ENST00000511281 TMEM106CQ9BVX2 250 aa11.22□□□□□ -0.61
HMGB1P47-201ENST00000511281 BRPF1P55201 1214 aaPredicted RBP11.21□□□□□ -0.61
HMGB1P47-201ENST00000511281 SMYD5Q6GMV2 418 aa11.2□□□□□ -0.62
HMGB1P47-201ENST00000511281 GOLGA2Q08379 1002 aa11.19□□□□□ -0.62
HMGB1P47-201ENST00000511281 TIE1P35590 1138 aa11.17□□□□□ -0.62
HMGB1P47-201ENST00000511281 MS4A3Q96HJ5 214 aa11.17□□□□□ -0.62
HMGB1P47-201ENST00000511281 ZMYND10O75800 440 aa11.16□□□□□ -0.62
HMGB1P47-201ENST00000511281 MKRN3Q13064 507 aaKnown RBP11.16□□□□□ -0.62
HMGB1P47-201ENST00000511281 TRPC6Q9Y210 931 aa11.16□□□□□ -0.62
HMGB1P47-201ENST00000511281 C19orf67A6NJJ6 358 aa11.15□□□□□ -0.62
HMGB1P47-201ENST00000511281 GPHNQ9NQX3 736 aaPredicted RBP11.12□□□□□ -0.63
HMGB1P47-201ENST00000511281 SLC24A3Q9HC58 644 aa11.11□□□□□ -0.63
HMGB1P47-201ENST00000511281 TTLL13PA6NNM8 815 aa11.1□□□□□ -0.63
HMGB1P47-201ENST00000511281 BARGINQ6ZT62 677 aa11.1□□□□□ -0.63
HMGB1P47-201ENST00000511281 PPP1R15BQ5SWA1 713 aa11.09□□□□□ -0.63
HMGB1P47-201ENST00000511281 BMP2KQ9NSY1 1161 aaPredicted RBP11.06□□□□□ -0.64
HMGB1P47-201ENST00000511281 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.06□□□□□ -0.64
HMGB1P47-201ENST00000511281 NEUROD2Q15784 382 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms