RNA–Protein interactions for RNA: ENST00000510771.1

GYPA-207, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 3

Gene GYPA, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-207ENST00000510771 RASEFQ8IZ41 740 aa17.72■□□□□ 0.43
GYPA-207ENST00000510771 VASPP50552 380 aaPredicted RBP17.66■□□□□ 0.42
GYPA-207ENST00000510771 NUBP1P53384 320 aa17.65■□□□□ 0.42
GYPA-207ENST00000510771 MS4A3Q96HJ5 214 aa17.63■□□□□ 0.41
GYPA-207ENST00000510771 FAM212AQ96EL1 285 aa17.6■□□□□ 0.41
GYPA-207ENST00000510771 KIF12Q96FN5 646 aa17.6■□□□□ 0.41
GYPA-207ENST00000510771 LHX8Q68G74 356 aa17.53■□□□□ 0.4
GYPA-207ENST00000510771 KLHL34Q8N239 644 aa17.53■□□□□ 0.4
GYPA-207ENST00000510771 MAP3K13O43283 966 aa17.5■□□□□ 0.39
GYPA-207ENST00000510771 ASTLQ6HA08 431 aaPredicted RBP17.47■□□□□ 0.39
GYPA-207ENST00000510771 SGIP1Q9BQI5 828 aa17.47■□□□□ 0.39
GYPA-207ENST00000510771 DCAF8Q5TAQ9 597 aa17.43■□□□□ 0.38
GYPA-207ENST00000510771 ATMINO43313 823 aaPredicted RBP17.42■□□□□ 0.38
GYPA-207ENST00000510771 PCDHB13Q9Y5F0 798 aa17.4■□□□□ 0.38
GYPA-207ENST00000510771 TIE1P35590 1138 aa17.37■□□□□ 0.37
GYPA-207ENST00000510771 PELP1Q8IZL8 1130 aaKnown RBP17.36■□□□□ 0.37
GYPA-207ENST00000510771 GSE1Q14687 1217 aa17.35■□□□□ 0.37
GYPA-207ENST00000510771 SLC39A7Q92504 469 aa17.34■□□□□ 0.37
GYPA-207ENST00000510771 BMP2KQ9NSY1 1161 aaPredicted RBP17.33■□□□□ 0.36
GYPA-207ENST00000510771 IFNLR1Q8IU57 520 aaPredicted RBP17.32■□□□□ 0.36
GYPA-207ENST00000510771 C7P10643 843 aa17.31■□□□□ 0.36
GYPA-207ENST00000510771 ATN1P54259 1190 aaPredicted RBP17.31■□□□□ 0.36
GYPA-207ENST00000510771 TRPC6Q9Y210 931 aa17.31■□□□□ 0.36
GYPA-207ENST00000510771 SPOCK2Q92563 424 aa17.3■□□□□ 0.36
GYPA-207ENST00000510771 METRNQ9UJH8 293 aa17.29■□□□□ 0.36
GYPA-207ENST00000510771 IFNL1Q8IU54 200 aa17.28■□□□□ 0.36
GYPA-207ENST00000510771 PYGBP11216 843 aa17.27■□□□□ 0.36
GYPA-207ENST00000510771 TTLL13PA6NNM8 815 aa17.24■□□□□ 0.35
GYPA-207ENST00000510771 CHRM1P11229 460 aaPredicted RBP17.15■□□□□ 0.34
GYPA-207ENST00000510771 POTEB2H3BUK9 544 aa17.14■□□□□ 0.33
GYPA-207ENST00000510771 TMEM106CQ9BVX2 250 aa17.14■□□□□ 0.33
GYPA-207ENST00000510771 ZNF467Q7Z7K2 595 aaPredicted RBP17.13■□□□□ 0.33
GYPA-207ENST00000510771 TRIM35Q9UPQ4 493 aa17.13■□□□□ 0.33
GYPA-207ENST00000510771 CIZ1Q9ULV3 898 aaPredicted RBP17.12■□□□□ 0.33
GYPA-207ENST00000510771 IER5LQ5T953 404 aa17.11■□□□□ 0.33
GYPA-207ENST00000510771 PCDHB8Q9UN66 801 aa17.1■□□□□ 0.33
GYPA-207ENST00000510771 SEC24BO95487 1268 aa17.05■□□□□ 0.32
GYPA-207ENST00000510771 OTUD5Q96G74 571 aa17.04■□□□□ 0.32
GYPA-207ENST00000510771 MAMSTRQ6ZN01 415 aa17.03■□□□□ 0.32
GYPA-207ENST00000510771 TRIM41Q8WV44 630 aa17.01■□□□□ 0.31
GYPA-207ENST00000510771 POTEFA5A3E0 1075 aa17■□□□□ 0.31
GYPA-207ENST00000510771 COLQQ9Y215 455 aaPredicted RBP16.96■□□□□ 0.31
GYPA-207ENST00000510771 POTEJP0CG39 1038 aa16.94■□□□□ 0.3
GYPA-207ENST00000510771 SCUBE2Q9NQ36 999 aa16.94■□□□□ 0.3
GYPA-207ENST00000510771 PLCG2P16885 1265 aa16.91■□□□□ 0.3
GYPA-207ENST00000510771 PSEN1P49768 467 aa16.91■□□□□ 0.3
GYPA-207ENST00000510771 PDAP1Q13442 181 aaKnown RBP16.9■□□□□ 0.3
GYPA-207ENST00000510771 IRX5P78411 483 aaPredicted RBP16.87■□□□□ 0.29
GYPA-207ENST00000510771 GOLGA2Q08379 1002 aa16.87■□□□□ 0.29
GYPA-207ENST00000510771 OCEL1Q9H607 264 aa16.84■□□□□ 0.29
GYPA-207ENST00000510771 MKRN3Q13064 507 aaKnown RBP16.81■□□□□ 0.28
GYPA-207ENST00000510771 RIOK3O14730 519 aaKnown RBP16.69■□□□□ 0.26
GYPA-207ENST00000510771 CABP2Q9NPB3 220 aa16.69■□□□□ 0.26
GYPA-207ENST00000510771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.68■□□□□ 0.26
GYPA-207ENST00000510771 PDCD7Q8N8D1 485 aaKnown RBP16.67■□□□□ 0.26
GYPA-207ENST00000510771 RNF25Q96BH1 459 aaPredicted RBP16.64■□□□□ 0.25
GYPA-207ENST00000510771 VGFO15240 615 aaPredicted RBP16.63■□□□□ 0.25
GYPA-207ENST00000510771 L3MBTL3Q96JM7 780 aaPredicted RBP16.62■□□□□ 0.25
GYPA-207ENST00000510771 ILDR1Q86SU0 546 aaPredicted RBP16.61■□□□□ 0.25
GYPA-207ENST00000510771 SLAIN1Q8ND83 568 aa16.6■□□□□ 0.25
GYPA-207ENST00000510771 TAOK2Q9UL54 1235 aa16.6■□□□□ 0.25
GYPA-207ENST00000510771 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.57■□□□□ 0.24
GYPA-207ENST00000510771 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.54■□□□□ 0.24
GYPA-207ENST00000510771 ECM2O94769 699 aaPredicted RBP16.54■□□□□ 0.24
GYPA-207ENST00000510771 ZFP91Q96JP5 570 aaPredicted RBP16.54■□□□□ 0.24
GYPA-207ENST00000510771 C3orf67Q6ZVT6 689 aa16.52■□□□□ 0.24
GYPA-207ENST00000510771 EFCAB3Q8N7B9 438 aa16.51■□□□□ 0.23
GYPA-207ENST00000510771 FAM163AQ96GL9 167 aaPredicted RBP16.5■□□□□ 0.23
GYPA-207ENST00000510771 G3V3G9 751 aa16.48■□□□□ 0.23
GYPA-207ENST00000510771 POTEMA6NI47 508 aa16.47■□□□□ 0.23
GYPA-207ENST00000510771 PKD2Q13563 968 aa16.47■□□□□ 0.23
GYPA-207ENST00000510771 SOX12O15370 315 aa16.45■□□□□ 0.22
GYPA-207ENST00000510771 POTEGQ6S5H5 508 aa16.45■□□□□ 0.22
GYPA-207ENST00000510771 DPY19L2Q6NUT2 758 aa16.44■□□□□ 0.22
GYPA-207ENST00000510771 LCE2DQ5TA82 110 aaPredicted RBP16.42■□□□□ 0.22
GYPA-207ENST00000510771 BOLA1Q9Y3E2 137 aa16.42■□□□□ 0.22
GYPA-207ENST00000510771 SNPHO15079 494 aa16.4■□□□□ 0.22
GYPA-207ENST00000510771 BCL11BQ9C0K0 894 aaPredicted RBP16.39■□□□□ 0.21
GYPA-207ENST00000510771 STK24Q9Y6E0 443 aa16.36■□□□□ 0.21
GYPA-207ENST00000510771 RGL2O15211 777 aa16.35■□□□□ 0.21
GYPA-207ENST00000510771 STK25O00506 426 aa16.34■□□□□ 0.21
GYPA-207ENST00000510771 TMEM121BQ9BXQ6 578 aaPredicted RBP16.31■□□□□ 0.2
GYPA-207ENST00000510771 PHF8Q9UPP1 1060 aa16.3■□□□□ 0.2
GYPA-207ENST00000510771 ST18O60284 1047 aa16.29■□□□□ 0.2
GYPA-207ENST00000510771 NLRP6P59044 892 aa16.29■□□□□ 0.2
GYPA-207ENST00000510771 PCDH10Q9P2E7 1040 aa16.29■□□□□ 0.2
GYPA-207ENST00000510771 MS4A4AQ96JQ5 239 aa16.26■□□□□ 0.19
GYPA-207ENST00000510771 MICALL2Q8IY33 904 aa16.24■□□□□ 0.19
GYPA-207ENST00000510771 FBXO22Q8NEZ5 403 aa16.2■□□□□ 0.18
GYPA-207ENST00000510771 MFRPQ9BY79 579 aa16.18■□□□□ 0.18
GYPA-207ENST00000510771 HS6ST3Q8IZP7 471 aa16.09■□□□□ 0.17
GYPA-207ENST00000510771 PLSCR2Q9NRY7 297 aa16.09■□□□□ 0.17
GYPA-207ENST00000510771 DOK7Q18PE1 504 aa16.07■□□□□ 0.16
GYPA-207ENST00000510771 HOXB3P14651 431 aaPredicted RBP16.05■□□□□ 0.16
GYPA-207ENST00000510771 TMEM92Q6UXU6 159 aa16.05■□□□□ 0.16
GYPA-207ENST00000510771 CDAN1Q8IWY9 1227 aa16.04■□□□□ 0.16
GYPA-207ENST00000510771 MARVELD3Q96A59 401 aa16.04■□□□□ 0.16
GYPA-207ENST00000510771 ZNF710Q8N1W2 664 aa16.03■□□□□ 0.16
GYPA-207ENST00000510771 EMP3P54852 163 aa16.02■□□□□ 0.16
GYPA-207ENST00000510771 RIMBP2O15034 1052 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms