RNA–Protein interactions for RNA: ENST00000509691.1

SEC31A-229, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2

Gene SEC31A, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-229ENST00000509691 LHX8Q68G74 356 aa12.25□□□□□ -0.45
SEC31A-229ENST00000509691 RASEFQ8IZ41 740 aa12.25□□□□□ -0.45
SEC31A-229ENST00000509691 MS4A3Q96HJ5 214 aa12.23□□□□□ -0.45
SEC31A-229ENST00000509691 NUBP1P53384 320 aa12.18□□□□□ -0.46
SEC31A-229ENST00000509691 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
SEC31A-229ENST00000509691 MAP3K13O43283 966 aa12.12□□□□□ -0.47
SEC31A-229ENST00000509691 VASPP50552 380 aaPredicted RBP12.11□□□□□ -0.47
SEC31A-229ENST00000509691 FAM212AQ96EL1 285 aa12.11□□□□□ -0.47
SEC31A-229ENST00000509691 ASTLQ6HA08 431 aaPredicted RBP12.1□□□□□ -0.47
SEC31A-229ENST00000509691 ATMINO43313 823 aaPredicted RBP12.09□□□□□ -0.47
SEC31A-229ENST00000509691 PELP1Q8IZL8 1130 aaKnown RBP12.09□□□□□ -0.47
SEC31A-229ENST00000509691 KLHL34Q8N239 644 aa12.06□□□□□ -0.48
SEC31A-229ENST00000509691 DCAF8Q5TAQ9 597 aa12.03□□□□□ -0.48
SEC31A-229ENST00000509691 TRPC6Q9Y210 931 aa12.03□□□□□ -0.48
SEC31A-229ENST00000509691 PCDHB13Q9Y5F0 798 aa12.03□□□□□ -0.48
SEC31A-229ENST00000509691 ATN1P54259 1190 aaPredicted RBP12.02□□□□□ -0.49
SEC31A-229ENST00000509691 SLC39A7Q92504 469 aa12.02□□□□□ -0.49
SEC31A-229ENST00000509691 SGIP1Q9BQI5 828 aa12.02□□□□□ -0.49
SEC31A-229ENST00000509691 BMP2KQ9NSY1 1161 aaPredicted RBP12.01□□□□□ -0.49
SEC31A-229ENST00000509691 TIE1P35590 1138 aa12□□□□□ -0.49
SEC31A-229ENST00000509691 METRNQ9UJH8 293 aa12□□□□□ -0.49
SEC31A-229ENST00000509691 C7P10643 843 aa11.99□□□□□ -0.49
SEC31A-229ENST00000509691 POTEB2H3BUK9 544 aa11.97□□□□□ -0.49
SEC31A-229ENST00000509691 IFNL1Q8IU54 200 aa11.95□□□□□ -0.5
SEC31A-229ENST00000509691 TTLL13PA6NNM8 815 aa11.94□□□□□ -0.5
SEC31A-229ENST00000509691 PYGBP11216 843 aa11.94□□□□□ -0.5
SEC31A-229ENST00000509691 GSE1Q14687 1217 aa11.92□□□□□ -0.5
SEC31A-229ENST00000509691 IFNLR1Q8IU57 520 aaPredicted RBP11.9□□□□□ -0.5
SEC31A-229ENST00000509691 OTUD5Q96G74 571 aa11.89□□□□□ -0.51
SEC31A-229ENST00000509691 TRIM35Q9UPQ4 493 aa11.87□□□□□ -0.51
SEC31A-229ENST00000509691 SPOCK2Q92563 424 aa11.86□□□□□ -0.51
SEC31A-229ENST00000509691 TMEM106CQ9BVX2 250 aa11.85□□□□□ -0.51
SEC31A-229ENST00000509691 POTEFA5A3E0 1075 aa11.83□□□□□ -0.52
SEC31A-229ENST00000509691 PCDHB8Q9UN66 801 aa11.83□□□□□ -0.52
SEC31A-229ENST00000509691 SEC24BO95487 1268 aa11.82□□□□□ -0.52
SEC31A-229ENST00000509691 POTEJP0CG39 1038 aa11.81□□□□□ -0.52
SEC31A-229ENST00000509691 IER5LQ5T953 404 aa11.81□□□□□ -0.52
SEC31A-229ENST00000509691 MAMSTRQ6ZN01 415 aa11.79□□□□□ -0.52
SEC31A-229ENST00000509691 CIZ1Q9ULV3 898 aaPredicted RBP11.79□□□□□ -0.52
SEC31A-229ENST00000509691 CHRM1P11229 460 aaPredicted RBP11.78□□□□□ -0.52
SEC31A-229ENST00000509691 ZNF467Q7Z7K2 595 aaPredicted RBP11.78□□□□□ -0.52
SEC31A-229ENST00000509691 COLQQ9Y215 455 aaPredicted RBP11.78□□□□□ -0.52
SEC31A-229ENST00000509691 SCUBE2Q9NQ36 999 aa11.75□□□□□ -0.53
SEC31A-229ENST00000509691 PLCG2P16885 1265 aa11.7□□□□□ -0.54
SEC31A-229ENST00000509691 PSEN1P49768 467 aa11.67□□□□□ -0.54
SEC31A-229ENST00000509691 IRX5P78411 483 aaPredicted RBP11.67□□□□□ -0.54
SEC31A-229ENST00000509691 GOLGA2Q08379 1002 aa11.65□□□□□ -0.54
SEC31A-229ENST00000509691 OCEL1Q9H607 264 aa11.64□□□□□ -0.55
SEC31A-229ENST00000509691 PDAP1Q13442 181 aaKnown RBP11.63□□□□□ -0.55
SEC31A-229ENST00000509691 TRIM41Q8WV44 630 aa11.62□□□□□ -0.55
SEC31A-229ENST00000509691 MKRN3Q13064 507 aaKnown RBP11.61□□□□□ -0.55
SEC31A-229ENST00000509691 PDCD7Q8N8D1 485 aaKnown RBP11.53□□□□□ -0.56
SEC31A-229ENST00000509691 SLAIN1Q8ND83 568 aa11.53□□□□□ -0.56
SEC31A-229ENST00000509691 FAM163AQ96GL9 167 aaPredicted RBP11.53□□□□□ -0.56
SEC31A-229ENST00000509691 CABP2Q9NPB3 220 aa11.53□□□□□ -0.56
SEC31A-229ENST00000509691 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.53□□□□□ -0.56
SEC31A-229ENST00000509691 POTEMA6NI47 508 aa11.52□□□□□ -0.57
SEC31A-229ENST00000509691 POTEGQ6S5H5 508 aa11.49□□□□□ -0.57
SEC31A-229ENST00000509691 PLSCR2Q9NRY7 297 aa11.49□□□□□ -0.57
SEC31A-229ENST00000509691 L3MBTL3Q96JM7 780 aaPredicted RBP11.47□□□□□ -0.57
SEC31A-229ENST00000509691 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.47□□□□□ -0.57
SEC31A-229ENST00000509691 RIOK3O14730 519 aaKnown RBP11.46□□□□□ -0.57
SEC31A-229ENST00000509691 LCE2DQ5TA82 110 aaPredicted RBP11.46□□□□□ -0.57
SEC31A-229ENST00000509691 RNF25Q96BH1 459 aaPredicted RBP11.45□□□□□ -0.58
SEC31A-229ENST00000509691 ILDR1Q86SU0 546 aaPredicted RBP11.44□□□□□ -0.58
SEC31A-229ENST00000509691 C3orf67Q6ZVT6 689 aa11.43□□□□□ -0.58
SEC31A-229ENST00000509691 VGFO15240 615 aaPredicted RBP11.41□□□□□ -0.58
SEC31A-229ENST00000509691 DPY19L2Q6NUT2 758 aa11.4□□□□□ -0.58
SEC31A-229ENST00000509691 EFCAB3Q8N7B9 438 aa11.4□□□□□ -0.58
SEC31A-229ENST00000509691 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.39□□□□□ -0.59
SEC31A-229ENST00000509691 ZFP91Q96JP5 570 aaPredicted RBP11.39□□□□□ -0.59
SEC31A-229ENST00000509691 G3V3G9 751 aa11.37□□□□□ -0.59
SEC31A-229ENST00000509691 SNPHO15079 494 aa11.34□□□□□ -0.59
SEC31A-229ENST00000509691 ST18O60284 1047 aa11.34□□□□□ -0.59
SEC31A-229ENST00000509691 BOLA1Q9Y3E2 137 aa11.34□□□□□ -0.59
SEC31A-229ENST00000509691 ECM2O94769 699 aaPredicted RBP11.33□□□□□ -0.6
SEC31A-229ENST00000509691 TAOK2Q9UL54 1235 aa11.33□□□□□ -0.6
SEC31A-229ENST00000509691 PCDH10Q9P2E7 1040 aa11.32□□□□□ -0.6
SEC31A-229ENST00000509691 SOX12O15370 315 aa11.3□□□□□ -0.6
SEC31A-229ENST00000509691 PKD2Q13563 968 aa11.29□□□□□ -0.6
SEC31A-229ENST00000509691 BCL11BQ9C0K0 894 aaPredicted RBP11.28□□□□□ -0.6
SEC31A-229ENST00000509691 PHF8Q9UPP1 1060 aa11.25□□□□□ -0.61
SEC31A-229ENST00000509691 STK24Q9Y6E0 443 aa11.25□□□□□ -0.61
SEC31A-229ENST00000509691 TMEM121BQ9BXQ6 578 aaPredicted RBP11.24□□□□□ -0.61
SEC31A-229ENST00000509691 STK25O00506 426 aa11.23□□□□□ -0.61
SEC31A-229ENST00000509691 RGL2O15211 777 aa11.23□□□□□ -0.61
SEC31A-229ENST00000509691 MS4A4AQ96JQ5 239 aa11.22□□□□□ -0.61
SEC31A-229ENST00000509691 MICALL2Q8IY33 904 aa11.21□□□□□ -0.61
SEC31A-229ENST00000509691 NLRP6P59044 892 aa11.2□□□□□ -0.62
SEC31A-229ENST00000509691 CDAN1Q8IWY9 1227 aa11.2□□□□□ -0.62
SEC31A-229ENST00000509691 MARVELD3Q96A59 401 aa11.18□□□□□ -0.62
SEC31A-229ENST00000509691 FBXO22Q8NEZ5 403 aa11.15□□□□□ -0.62
SEC31A-229ENST00000509691 MFRPQ9BY79 579 aa11.14□□□□□ -0.63
SEC31A-229ENST00000509691 HOXB3P14651 431 aaPredicted RBP11.12□□□□□ -0.63
SEC31A-229ENST00000509691 EMP3P54852 163 aa11.12□□□□□ -0.63
SEC31A-229ENST00000509691 TMEM92Q6UXU6 159 aa11.12□□□□□ -0.63
SEC31A-229ENST00000509691 DOK7Q18PE1 504 aa11.1□□□□□ -0.63
SEC31A-229ENST00000509691 ZNF710Q8N1W2 664 aa11.1□□□□□ -0.63
SEC31A-229ENST00000509691 RIMBP2O15034 1052 aa11.05□□□□□ -0.64
SEC31A-229ENST00000509691 FAM205CA6NFA0 338 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms