RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 KIF12Q96FN5 646 aa12.52□□□□□ -0.41
GYPB-209ENST00000508618 PELP1Q8IZL8 1130 aaKnown RBP12.51□□□□□ -0.41
GYPB-209ENST00000508618 ZBTB47Q9UFB7 747 aaPredicted RBP12.51□□□□□ -0.41
GYPB-209ENST00000508618 SLC39A7Q92504 469 aa12.5□□□□□ -0.41
GYPB-209ENST00000508618 RASEFQ8IZ41 740 aa12.49□□□□□ -0.41
GYPB-209ENST00000508618 C7P10643 843 aa12.48□□□□□ -0.41
GYPB-209ENST00000508618 PLCD3Q8N3E9 789 aa12.48□□□□□ -0.41
GYPB-209ENST00000508618 METRNQ9UJH8 293 aa12.48□□□□□ -0.41
GYPB-209ENST00000508618 POTEB2H3BUK9 544 aa12.47□□□□□ -0.41
GYPB-209ENST00000508618 OTUD5Q96G74 571 aa12.47□□□□□ -0.41
GYPB-209ENST00000508618 FKBP8Q14318 412 aa12.45□□□□□ -0.42
GYPB-209ENST00000508618 TIE1P35590 1138 aa12.41□□□□□ -0.42
GYPB-209ENST00000508618 SGIP1Q9BQI5 828 aa12.41□□□□□ -0.42
GYPB-209ENST00000508618 MAP3K13O43283 966 aa12.4□□□□□ -0.42
GYPB-209ENST00000508618 NUBP1P53384 320 aa12.39□□□□□ -0.43
GYPB-209ENST00000508618 ATN1P54259 1190 aaPredicted RBP12.39□□□□□ -0.43
GYPB-209ENST00000508618 BMP2KQ9NSY1 1161 aaPredicted RBP12.39□□□□□ -0.43
GYPB-209ENST00000508618 MAMSTRQ6ZN01 415 aa12.34□□□□□ -0.43
GYPB-209ENST00000508618 FAM212AQ96EL1 285 aa12.33□□□□□ -0.44
GYPB-209ENST00000508618 TRPC6Q9Y210 931 aa12.33□□□□□ -0.44
GYPB-209ENST00000508618 FBXO3Q9UK99 471 aa12.32□□□□□ -0.44
GYPB-209ENST00000508618 POTEJP0CG39 1038 aa12.3□□□□□ -0.44
GYPB-209ENST00000508618 TTLL13PA6NNM8 815 aa12.29□□□□□ -0.44
GYPB-209ENST00000508618 PCDHB13Q9Y5F0 798 aa12.29□□□□□ -0.44
GYPB-209ENST00000508618 IER5LQ5T953 404 aa12.26□□□□□ -0.45
GYPB-209ENST00000508618 POTEFA5A3E0 1075 aa12.25□□□□□ -0.45
GYPB-209ENST00000508618 SCUBE2Q9NQ36 999 aa12.25□□□□□ -0.45
GYPB-209ENST00000508618 IFNL1Q8IU54 200 aa12.22□□□□□ -0.45
GYPB-209ENST00000508618 TRIM35Q9UPQ4 493 aa12.2□□□□□ -0.46
GYPB-209ENST00000508618 SEC24BO95487 1268 aa12.16□□□□□ -0.46
GYPB-209ENST00000508618 COLQQ9Y215 455 aaPredicted RBP12.16□□□□□ -0.46
GYPB-209ENST00000508618 POTEMA6NI47 508 aa12.15□□□□□ -0.46
GYPB-209ENST00000508618 VASPP50552 380 aaPredicted RBP12.15□□□□□ -0.46
GYPB-209ENST00000508618 TMEM106CQ9BVX2 250 aa12.13□□□□□ -0.47
GYPB-209ENST00000508618 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
GYPB-209ENST00000508618 DCAF8Q5TAQ9 597 aa12.1□□□□□ -0.47
GYPB-209ENST00000508618 PCDH10Q9P2E7 1040 aa12.08□□□□□ -0.48
GYPB-209ENST00000508618 PYGBP11216 843 aa12.07□□□□□ -0.48
GYPB-209ENST00000508618 GSE1Q14687 1217 aa12.07□□□□□ -0.48
GYPB-209ENST00000508618 LCE2DQ5TA82 110 aaPredicted RBP12.07□□□□□ -0.48
GYPB-209ENST00000508618 IRX5P78411 483 aaPredicted RBP12.05□□□□□ -0.48
GYPB-209ENST00000508618 PLCG2P16885 1265 aa12.04□□□□□ -0.48
GYPB-209ENST00000508618 KLHL34Q8N239 644 aa12.02□□□□□ -0.49
GYPB-209ENST00000508618 PLSCR2Q9NRY7 297 aa12.02□□□□□ -0.49
GYPB-209ENST00000508618 CHRM1P11229 460 aaPredicted RBP12.01□□□□□ -0.49
GYPB-209ENST00000508618 ZNF467Q7Z7K2 595 aaPredicted RBP12.01□□□□□ -0.49
GYPB-209ENST00000508618 OCEL1Q9H607 264 aa11.98□□□□□ -0.49
GYPB-209ENST00000508618 PCDHB8Q9UN66 801 aa11.98□□□□□ -0.49
GYPB-209ENST00000508618 FAM163AQ96GL9 167 aaPredicted RBP11.96□□□□□ -0.49
GYPB-209ENST00000508618 SLAIN1Q8ND83 568 aa11.92□□□□□ -0.5
GYPB-209ENST00000508618 SPOCK2Q92563 424 aa11.9□□□□□ -0.5
GYPB-209ENST00000508618 IFNLR1Q8IU57 520 aaPredicted RBP11.87□□□□□ -0.51
GYPB-209ENST00000508618 PDCD7Q8N8D1 485 aaKnown RBP11.87□□□□□ -0.51
GYPB-209ENST00000508618 PSEN1P49768 467 aa11.84□□□□□ -0.51
GYPB-209ENST00000508618 GOLGA2Q08379 1002 aa11.84□□□□□ -0.51
GYPB-209ENST00000508618 MKRN3Q13064 507 aaKnown RBP11.84□□□□□ -0.51
GYPB-209ENST00000508618 PDAP1Q13442 181 aaKnown RBP11.83□□□□□ -0.52
GYPB-209ENST00000508618 ILDR1Q86SU0 546 aaPredicted RBP11.82□□□□□ -0.52
GYPB-209ENST00000508618 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.82□□□□□ -0.52
GYPB-209ENST00000508618 ST18O60284 1047 aa11.8□□□□□ -0.52
GYPB-209ENST00000508618 TMEM121BQ9BXQ6 578 aaPredicted RBP11.8□□□□□ -0.52
GYPB-209ENST00000508618 SNPHO15079 494 aa11.78□□□□□ -0.52
GYPB-209ENST00000508618 TRIM41Q8WV44 630 aa11.78□□□□□ -0.52
GYPB-209ENST00000508618 L3MBTL3Q96JM7 780 aaPredicted RBP11.78□□□□□ -0.52
GYPB-209ENST00000508618 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
GYPB-209ENST00000508618 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.76□□□□□ -0.53
GYPB-209ENST00000508618 CIZ1Q9ULV3 898 aaPredicted RBP11.76□□□□□ -0.53
GYPB-209ENST00000508618 CDAN1Q8IWY9 1227 aa11.73□□□□□ -0.53
GYPB-209ENST00000508618 CABP2Q9NPB3 220 aa11.68□□□□□ -0.54
GYPB-209ENST00000508618 BOLA1Q9Y3E2 137 aa11.62□□□□□ -0.55
GYPB-209ENST00000508618 G3V3G9 751 aa11.58□□□□□ -0.56
GYPB-209ENST00000508618 DPY19L2Q6NUT2 758 aa11.58□□□□□ -0.56
GYPB-209ENST00000508618 RIOK3O14730 519 aaKnown RBP11.55□□□□□ -0.56
GYPB-209ENST00000508618 MARVELD3Q96A59 401 aa11.55□□□□□ -0.56
GYPB-209ENST00000508618 EMP3P54852 163 aa11.53□□□□□ -0.56
GYPB-209ENST00000508618 EFCAB3Q8N7B9 438 aa11.53□□□□□ -0.56
GYPB-209ENST00000508618 RNF25Q96BH1 459 aaPredicted RBP11.53□□□□□ -0.56
GYPB-209ENST00000508618 VGFO15240 615 aaPredicted RBP11.51□□□□□ -0.57
GYPB-209ENST00000508618 SOX12O15370 315 aa11.49□□□□□ -0.57
GYPB-209ENST00000508618 HOXB3P14651 431 aaPredicted RBP11.48□□□□□ -0.57
GYPB-209ENST00000508618 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.46□□□□□ -0.57
GYPB-209ENST00000508618 SPNS2Q8IVW8 549 aa11.46□□□□□ -0.57
GYPB-209ENST00000508618 ZFP91Q96JP5 570 aaPredicted RBP11.46□□□□□ -0.57
GYPB-209ENST00000508618 HS3ST6Q96QI5 342 aa11.45□□□□□ -0.58
GYPB-209ENST00000508618 DOK7Q18PE1 504 aa11.44□□□□□ -0.58
GYPB-209ENST00000508618 MICALL2Q8IY33 904 aa11.44□□□□□ -0.58
GYPB-209ENST00000508618 MMRN1Q13201 1228 aa11.43□□□□□ -0.58
GYPB-209ENST00000508618 HOXB1P14653 301 aaPredicted RBP11.42□□□□□ -0.58
GYPB-209ENST00000508618 TAOK2Q9UL54 1235 aa11.42□□□□□ -0.58
GYPB-209ENST00000508618 MS4A4AQ96JQ5 239 aa11.41□□□□□ -0.58
GYPB-209ENST00000508618 POTEB3A0JP26 581 aa11.4□□□□□ -0.58
GYPB-209ENST00000508618 FAM205CA6NFA0 338 aa11.4□□□□□ -0.58
GYPB-209ENST00000508618 POTEBQ6S5H4 581 aa11.4□□□□□ -0.58
GYPB-209ENST00000508618 KRTAP3-3Q9BYR6 98 aa11.4□□□□□ -0.58
GYPB-209ENST00000508618 KRTAP3-2Q9BYR7 98 aa11.4□□□□□ -0.58
GYPB-209ENST00000508618 RIMBP2O15034 1052 aa11.39□□□□□ -0.59
GYPB-209ENST00000508618 ZNF710Q8N1W2 664 aa11.39□□□□□ -0.59
GYPB-209ENST00000508618 ZSWIM6Q9HCJ5 1215 aa11.38□□□□□ -0.59
GYPB-209ENST00000508618 PHF8Q9UPP1 1060 aa11.36□□□□□ -0.59
GYPB-209ENST00000508618 TMEM92Q6UXU6 159 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms