RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 CCDC61Q9Y6R9 512 aa14.65□□□□□ -0.06
UBE2D3-225ENST00000508476 SPOCK2Q92563 424 aa14.61□□□□□ -0.07
UBE2D3-225ENST00000508476 FAM212AQ96EL1 285 aa14.6□□□□□ -0.07
UBE2D3-225ENST00000508476 DCAF8Q5TAQ9 597 aa14.58□□□□□ -0.08
UBE2D3-225ENST00000508476 GALR2O43603 387 aaPredicted RBP14.56□□□□□ -0.08
UBE2D3-225ENST00000508476 KIF12Q96FN5 646 aa14.53□□□□□ -0.08
UBE2D3-225ENST00000508476 MS4A3Q96HJ5 214 aa14.5□□□□□ -0.09
UBE2D3-225ENST00000508476 MAP3K13O43283 966 aa14.49□□□□□ -0.09
UBE2D3-225ENST00000508476 CLCN6P51797 869 aa14.48□□□□□ -0.09
UBE2D3-225ENST00000508476 PYGBP11216 843 aa14.47□□□□□ -0.09
UBE2D3-225ENST00000508476 GSE1Q14687 1217 aa14.46□□□□□ -0.09
UBE2D3-225ENST00000508476 CIZ1Q9ULV3 898 aaPredicted RBP14.46□□□□□ -0.09
UBE2D3-225ENST00000508476 POTEIP0CG38 1075 aa14.43□□□□□ -0.1
UBE2D3-225ENST00000508476 TRPC6Q9Y210 931 aa14.4□□□□□ -0.1
UBE2D3-225ENST00000508476 PCDHB13Q9Y5F0 798 aa14.39□□□□□ -0.11
UBE2D3-225ENST00000508476 IFNL1Q8IU54 200 aa14.36□□□□□ -0.11
UBE2D3-225ENST00000508476 DCBLD2Q96PD2 775 aa14.36□□□□□ -0.11
UBE2D3-225ENST00000508476 SGIP1Q9BQI5 828 aa14.31□□□□□ -0.12
UBE2D3-225ENST00000508476 PCDHB8Q9UN66 801 aa14.31□□□□□ -0.12
UBE2D3-225ENST00000508476 CHRM1P11229 460 aaPredicted RBP14.29□□□□□ -0.12
UBE2D3-225ENST00000508476 BMP2KQ9NSY1 1161 aaPredicted RBP14.26□□□□□ -0.13
UBE2D3-225ENST00000508476 ATMINO43313 823 aaPredicted RBP14.25□□□□□ -0.13
UBE2D3-225ENST00000508476 PELP1Q8IZL8 1130 aaKnown RBP14.25□□□□□ -0.13
UBE2D3-225ENST00000508476 ASTLQ6HA08 431 aaPredicted RBP14.24□□□□□ -0.13
UBE2D3-225ENST00000508476 TIE1P35590 1138 aa14.21□□□□□ -0.13
UBE2D3-225ENST00000508476 ATN1P54259 1190 aaPredicted RBP14.21□□□□□ -0.13
UBE2D3-225ENST00000508476 PKD2Q13563 968 aa14.21□□□□□ -0.13
UBE2D3-225ENST00000508476 TTLL13PA6NNM8 815 aa14.2□□□□□ -0.14
UBE2D3-225ENST00000508476 TRIM41Q8WV44 630 aa14.19□□□□□ -0.14
UBE2D3-225ENST00000508476 ZNF467Q7Z7K2 595 aaPredicted RBP14.18□□□□□ -0.14
UBE2D3-225ENST00000508476 RNF25Q96BH1 459 aaPredicted RBP14.16□□□□□ -0.14
UBE2D3-225ENST00000508476 TMEM106CQ9BVX2 250 aa14.16□□□□□ -0.14
UBE2D3-225ENST00000508476 ECM2O94769 699 aaPredicted RBP14.13□□□□□ -0.15
UBE2D3-225ENST00000508476 TRIM35Q9UPQ4 493 aa14.11□□□□□ -0.15
UBE2D3-225ENST00000508476 PSEN1P49768 467 aa14.1□□□□□ -0.15
UBE2D3-225ENST00000508476 RIOK3O14730 519 aaKnown RBP14.06□□□□□ -0.16
UBE2D3-225ENST00000508476 PDAP1Q13442 181 aaKnown RBP14.06□□□□□ -0.16
UBE2D3-225ENST00000508476 METRNQ9UJH8 293 aa14.06□□□□□ -0.16
UBE2D3-225ENST00000508476 RGL2O15211 777 aa14.05□□□□□ -0.16
UBE2D3-225ENST00000508476 SLC39A7Q92504 469 aa14.04□□□□□ -0.16
UBE2D3-225ENST00000508476 C7P10643 843 aa14.01□□□□□ -0.17
UBE2D3-225ENST00000508476 POTEFA5A3E0 1075 aa14□□□□□ -0.17
UBE2D3-225ENST00000508476 POTEB2H3BUK9 544 aa13.98□□□□□ -0.17
UBE2D3-225ENST00000508476 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.97□□□□□ -0.17
UBE2D3-225ENST00000508476 LHX8Q68G74 356 aa13.97□□□□□ -0.17
UBE2D3-225ENST00000508476 ZFP91Q96JP5 570 aaPredicted RBP13.97□□□□□ -0.17
UBE2D3-225ENST00000508476 COLQQ9Y215 455 aaPredicted RBP13.97□□□□□ -0.17
UBE2D3-225ENST00000508476 VGFO15240 615 aaPredicted RBP13.95□□□□□ -0.18
UBE2D3-225ENST00000508476 CABP2Q9NPB3 220 aa13.94□□□□□ -0.18
UBE2D3-225ENST00000508476 IER5LQ5T953 404 aa13.93□□□□□ -0.18
UBE2D3-225ENST00000508476 SEC24BO95487 1268 aa13.9□□□□□ -0.18
UBE2D3-225ENST00000508476 IRX5P78411 483 aaPredicted RBP13.89□□□□□ -0.19
UBE2D3-225ENST00000508476 GOLGA2Q08379 1002 aa13.89□□□□□ -0.19
UBE2D3-225ENST00000508476 POTEJP0CG39 1038 aa13.88□□□□□ -0.19
UBE2D3-225ENST00000508476 MKRN3Q13064 507 aaKnown RBP13.87□□□□□ -0.19
UBE2D3-225ENST00000508476 BCL11BQ9C0K0 894 aaPredicted RBP13.86□□□□□ -0.19
UBE2D3-225ENST00000508476 EFCAB3Q8N7B9 438 aa13.85□□□□□ -0.19
UBE2D3-225ENST00000508476 PLCG2P16885 1265 aa13.84□□□□□ -0.19
UBE2D3-225ENST00000508476 STK25O00506 426 aa13.83□□□□□ -0.2
UBE2D3-225ENST00000508476 RTN4Q9NQC3 1192 aaKnown RBP13.83□□□□□ -0.2
UBE2D3-225ENST00000508476 TAOK2Q9UL54 1235 aa13.82□□□□□ -0.2
UBE2D3-225ENST00000508476 STK24Q9Y6E0 443 aa13.82□□□□□ -0.2
UBE2D3-225ENST00000508476 OCEL1Q9H607 264 aa13.81□□□□□ -0.2
UBE2D3-225ENST00000508476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.81□□□□□ -0.2
UBE2D3-225ENST00000508476 PDCD7Q8N8D1 485 aaKnown RBP13.8□□□□□ -0.2
UBE2D3-225ENST00000508476 OTUD5Q96G74 571 aa13.77□□□□□ -0.21
UBE2D3-225ENST00000508476 AMER1Q5JTC6 1135 aaPredicted RBP13.76□□□□□ -0.21
UBE2D3-225ENST00000508476 ILDR1Q86SU0 546 aaPredicted RBP13.76□□□□□ -0.21
UBE2D3-225ENST00000508476 DPY19L2Q6NUT2 758 aa13.74□□□□□ -0.21
UBE2D3-225ENST00000508476 CHGAP10645 457 aaKnown RBP13.71□□□□□ -0.21
UBE2D3-225ENST00000508476 PHF8Q9UPP1 1060 aa13.71□□□□□ -0.21
UBE2D3-225ENST00000508476 DCAF8L2P0C7V8 631 aa13.69□□□□□ -0.22
UBE2D3-225ENST00000508476 SOX12O15370 315 aa13.68□□□□□ -0.22
UBE2D3-225ENST00000508476 HS6ST3Q8IZP7 471 aa13.68□□□□□ -0.22
UBE2D3-225ENST00000508476 MS4A4AQ96JQ5 239 aa13.67□□□□□ -0.22
UBE2D3-225ENST00000508476 MFRPQ9BY79 579 aa13.66□□□□□ -0.22
UBE2D3-225ENST00000508476 MAMSTRQ6ZN01 415 aa13.63□□□□□ -0.23
UBE2D3-225ENST00000508476 FBXO22Q8NEZ5 403 aa13.63□□□□□ -0.23
UBE2D3-225ENST00000508476 SCUBE2Q9NQ36 999 aa13.63□□□□□ -0.23
UBE2D3-225ENST00000508476 NLRP6P59044 892 aa13.59□□□□□ -0.23
UBE2D3-225ENST00000508476 L3MBTL3Q96JM7 780 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-225ENST00000508476 NKX1-1Q15270 411 aaPredicted RBP13.57□□□□□ -0.24
UBE2D3-225ENST00000508476 BOLA1Q9Y3E2 137 aa13.57□□□□□ -0.24
UBE2D3-225ENST00000508476 SLAIN1Q8ND83 568 aa13.52□□□□□ -0.25
UBE2D3-225ENST00000508476 C3orf67Q6ZVT6 689 aa13.51□□□□□ -0.25
UBE2D3-225ENST00000508476 DNAJC5Q9H3Z4 198 aa13.51□□□□□ -0.25
UBE2D3-225ENST00000508476 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-225ENST00000508476 MICALL2Q8IY33 904 aa13.5□□□□□ -0.25
UBE2D3-225ENST00000508476 TMEM121BQ9BXQ6 578 aaPredicted RBP13.5□□□□□ -0.25
UBE2D3-225ENST00000508476 G3V3G9 751 aa13.49□□□□□ -0.25
UBE2D3-225ENST00000508476 PPP1R37O75864 691 aa13.49□□□□□ -0.25
UBE2D3-225ENST00000508476 TMEM92Q6UXU6 159 aa13.41□□□□□ -0.26
UBE2D3-225ENST00000508476 GTPBP6O43824 516 aaPredicted RBP13.38□□□□□ -0.27
UBE2D3-225ENST00000508476 FAM163AQ96GL9 167 aaPredicted RBP13.33□□□□□ -0.28
UBE2D3-225ENST00000508476 BBXQ8WY36 941 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-225ENST00000508476 LCE2DQ5TA82 110 aaPredicted RBP13.31□□□□□ -0.28
UBE2D3-225ENST00000508476 RYDENQ9NUL5 291 aaKnown RBP13.29□□□□□ -0.28
UBE2D3-225ENST00000508476 C2orf72A6NCS6 295 aa13.24□□□□□ -0.29
UBE2D3-225ENST00000508476 KIF3CO14782 793 aa13.23□□□□□ -0.29
UBE2D3-225ENST00000508476 ST18O60284 1047 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms