RNA–Protein interactions for RNA: ENST00000508108.2

CBX3P3-201, Transcript of chromobox 3 pseudogene 3, humanhuman

BASIC

Gene CBX3P3, Length 532 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P3-201ENST00000508108 CCDC61Q9Y6R9 512 aa12.21□□□□□ -0.45
CBX3P3-201ENST00000508108 CLCN6P51797 869 aa12.2□□□□□ -0.46
CBX3P3-201ENST00000508108 FAM212AQ96EL1 285 aa12.2□□□□□ -0.46
CBX3P3-201ENST00000508108 GALR2O43603 387 aaPredicted RBP12.17□□□□□ -0.46
CBX3P3-201ENST00000508108 DCAF8Q5TAQ9 597 aa12.16□□□□□ -0.46
CBX3P3-201ENST00000508108 SPOCK2Q92563 424 aa12.13□□□□□ -0.47
CBX3P3-201ENST00000508108 MS4A3Q96HJ5 214 aa12.12□□□□□ -0.47
CBX3P3-201ENST00000508108 KIF12Q96FN5 646 aa12.11□□□□□ -0.47
CBX3P3-201ENST00000508108 DCBLD2Q96PD2 775 aa12.1□□□□□ -0.47
CBX3P3-201ENST00000508108 MAP3K13O43283 966 aa12.08□□□□□ -0.48
CBX3P3-201ENST00000508108 POTEIP0CG38 1075 aa12.05□□□□□ -0.48
CBX3P3-201ENST00000508108 GSE1Q14687 1217 aa12.05□□□□□ -0.48
CBX3P3-201ENST00000508108 PYGBP11216 843 aa12.04□□□□□ -0.48
CBX3P3-201ENST00000508108 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
CBX3P3-201ENST00000508108 PCDHB13Q9Y5F0 798 aa12.03□□□□□ -0.48
CBX3P3-201ENST00000508108 TRPC6Q9Y210 931 aa11.98□□□□□ -0.49
CBX3P3-201ENST00000508108 SGIP1Q9BQI5 828 aa11.96□□□□□ -0.49
CBX3P3-201ENST00000508108 IFNL1Q8IU54 200 aa11.95□□□□□ -0.5
CBX3P3-201ENST00000508108 ATMINO43313 823 aaPredicted RBP11.91□□□□□ -0.5
CBX3P3-201ENST00000508108 ASTLQ6HA08 431 aaPredicted RBP11.91□□□□□ -0.5
CBX3P3-201ENST00000508108 BMP2KQ9NSY1 1161 aaPredicted RBP11.9□□□□□ -0.5
CBX3P3-201ENST00000508108 PCDHB8Q9UN66 801 aa11.9□□□□□ -0.5
CBX3P3-201ENST00000508108 TIE1P35590 1138 aa11.89□□□□□ -0.51
CBX3P3-201ENST00000508108 PELP1Q8IZL8 1130 aaKnown RBP11.89□□□□□ -0.51
CBX3P3-201ENST00000508108 ATN1P54259 1190 aaPredicted RBP11.88□□□□□ -0.51
CBX3P3-201ENST00000508108 CHRM1P11229 460 aaPredicted RBP11.87□□□□□ -0.51
CBX3P3-201ENST00000508108 TTLL13PA6NNM8 815 aa11.85□□□□□ -0.51
CBX3P3-201ENST00000508108 ZNF467Q7Z7K2 595 aaPredicted RBP11.84□□□□□ -0.51
CBX3P3-201ENST00000508108 TMEM106CQ9BVX2 250 aa11.83□□□□□ -0.52
CBX3P3-201ENST00000508108 TRIM41Q8WV44 630 aa11.82□□□□□ -0.52
CBX3P3-201ENST00000508108 SLC39A7Q92504 469 aa11.79□□□□□ -0.52
CBX3P3-201ENST00000508108 METRNQ9UJH8 293 aa11.79□□□□□ -0.52
CBX3P3-201ENST00000508108 TRIM35Q9UPQ4 493 aa11.79□□□□□ -0.52
CBX3P3-201ENST00000508108 LHX8Q68G74 356 aa11.78□□□□□ -0.52
CBX3P3-201ENST00000508108 C7P10643 843 aa11.76□□□□□ -0.53
CBX3P3-201ENST00000508108 PSEN1P49768 467 aa11.74□□□□□ -0.53
CBX3P3-201ENST00000508108 PDAP1Q13442 181 aaKnown RBP11.72□□□□□ -0.53
CBX3P3-201ENST00000508108 ECM2O94769 699 aaPredicted RBP11.71□□□□□ -0.53
CBX3P3-201ENST00000508108 RNF25Q96BH1 459 aaPredicted RBP11.7□□□□□ -0.54
CBX3P3-201ENST00000508108 PKD2Q13563 968 aa11.69□□□□□ -0.54
CBX3P3-201ENST00000508108 POTEB2H3BUK9 544 aa11.68□□□□□ -0.54
CBX3P3-201ENST00000508108 RIOK3O14730 519 aaKnown RBP11.68□□□□□ -0.54
CBX3P3-201ENST00000508108 SEC24BO95487 1268 aa11.68□□□□□ -0.54
CBX3P3-201ENST00000508108 GOLGA2Q08379 1002 aa11.67□□□□□ -0.54
CBX3P3-201ENST00000508108 IER5LQ5T953 404 aa11.67□□□□□ -0.54
CBX3P3-201ENST00000508108 POTEFA5A3E0 1075 aa11.66□□□□□ -0.54
CBX3P3-201ENST00000508108 COLQQ9Y215 455 aaPredicted RBP11.65□□□□□ -0.54
CBX3P3-201ENST00000508108 CABP2Q9NPB3 220 aa11.62□□□□□ -0.55
CBX3P3-201ENST00000508108 VGFO15240 615 aaPredicted RBP11.61□□□□□ -0.55
CBX3P3-201ENST00000508108 PLCG2P16885 1265 aa11.61□□□□□ -0.55
CBX3P3-201ENST00000508108 MKRN3Q13064 507 aaKnown RBP11.61□□□□□ -0.55
CBX3P3-201ENST00000508108 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
CBX3P3-201ENST00000508108 RGL2O15211 777 aa11.59□□□□□ -0.55
CBX3P3-201ENST00000508108 ZFP91Q96JP5 570 aaPredicted RBP11.59□□□□□ -0.55
CBX3P3-201ENST00000508108 IRX5P78411 483 aaPredicted RBP11.58□□□□□ -0.56
CBX3P3-201ENST00000508108 POTEJP0CG39 1038 aa11.56□□□□□ -0.56
CBX3P3-201ENST00000508108 OCEL1Q9H607 264 aa11.55□□□□□ -0.56
CBX3P3-201ENST00000508108 TAOK2Q9UL54 1235 aa11.55□□□□□ -0.56
CBX3P3-201ENST00000508108 OTUD5Q96G74 571 aa11.54□□□□□ -0.56
CBX3P3-201ENST00000508108 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.53□□□□□ -0.56
CBX3P3-201ENST00000508108 EFCAB3Q8N7B9 438 aa11.51□□□□□ -0.57
CBX3P3-201ENST00000508108 MAMSTRQ6ZN01 415 aa11.5□□□□□ -0.57
CBX3P3-201ENST00000508108 BCL11BQ9C0K0 894 aaPredicted RBP11.5□□□□□ -0.57
CBX3P3-201ENST00000508108 SCUBE2Q9NQ36 999 aa11.5□□□□□ -0.57
CBX3P3-201ENST00000508108 STK25O00506 426 aa11.49□□□□□ -0.57
CBX3P3-201ENST00000508108 PDCD7Q8N8D1 485 aaKnown RBP11.49□□□□□ -0.57
CBX3P3-201ENST00000508108 STK24Q9Y6E0 443 aa11.49□□□□□ -0.57
CBX3P3-201ENST00000508108 DPY19L2Q6NUT2 758 aa11.42□□□□□ -0.58
CBX3P3-201ENST00000508108 ILDR1Q86SU0 546 aaPredicted RBP11.41□□□□□ -0.58
CBX3P3-201ENST00000508108 SOX12O15370 315 aa11.4□□□□□ -0.58
CBX3P3-201ENST00000508108 L3MBTL3Q96JM7 780 aaPredicted RBP11.39□□□□□ -0.59
CBX3P3-201ENST00000508108 PHF8Q9UPP1 1060 aa11.39□□□□□ -0.59
CBX3P3-201ENST00000508108 G3V3G9 751 aa11.36□□□□□ -0.59
CBX3P3-201ENST00000508108 DCAF8L2P0C7V8 631 aa11.36□□□□□ -0.59
CBX3P3-201ENST00000508108 CHGAP10645 457 aaKnown RBP11.35□□□□□ -0.59
CBX3P3-201ENST00000508108 C3orf67Q6ZVT6 689 aa11.35□□□□□ -0.59
CBX3P3-201ENST00000508108 SLAIN1Q8ND83 568 aa11.35□□□□□ -0.59
CBX3P3-201ENST00000508108 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.35□□□□□ -0.59
CBX3P3-201ENST00000508108 NLRP6P59044 892 aa11.33□□□□□ -0.6
CBX3P3-201ENST00000508108 MS4A4AQ96JQ5 239 aa11.33□□□□□ -0.6
CBX3P3-201ENST00000508108 BOLA1Q9Y3E2 137 aa11.33□□□□□ -0.6
CBX3P3-201ENST00000508108 HS6ST3Q8IZP7 471 aa11.32□□□□□ -0.6
CBX3P3-201ENST00000508108 MFRPQ9BY79 579 aa11.31□□□□□ -0.6
CBX3P3-201ENST00000508108 AMER1Q5JTC6 1135 aaPredicted RBP11.3□□□□□ -0.6
CBX3P3-201ENST00000508108 FBXO22Q8NEZ5 403 aa11.29□□□□□ -0.6
CBX3P3-201ENST00000508108 RTN4Q9NQC3 1192 aaKnown RBP11.27□□□□□ -0.61
CBX3P3-201ENST00000508108 MICALL2Q8IY33 904 aa11.25□□□□□ -0.61
CBX3P3-201ENST00000508108 FAM163AQ96GL9 167 aaPredicted RBP11.22□□□□□ -0.61
CBX3P3-201ENST00000508108 TMEM121BQ9BXQ6 578 aaPredicted RBP11.22□□□□□ -0.61
CBX3P3-201ENST00000508108 NKX1-1Q15270 411 aaPredicted RBP11.17□□□□□ -0.62
CBX3P3-201ENST00000508108 PPP1R37O75864 691 aa11.15□□□□□ -0.62
CBX3P3-201ENST00000508108 DNAJC5Q9H3Z4 198 aa11.15□□□□□ -0.62
CBX3P3-201ENST00000508108 SNPHO15079 494 aa11.13□□□□□ -0.63
CBX3P3-201ENST00000508108 LCE2DQ5TA82 110 aaPredicted RBP11.12□□□□□ -0.63
CBX3P3-201ENST00000508108 TMEM92Q6UXU6 159 aa11.12□□□□□ -0.63
CBX3P3-201ENST00000508108 ST18O60284 1047 aa11.09□□□□□ -0.63
CBX3P3-201ENST00000508108 POTEMA6NI47 508 aa11.08□□□□□ -0.64
CBX3P3-201ENST00000508108 RYDENQ9NUL5 291 aaKnown RBP11.08□□□□□ -0.64
CBX3P3-201ENST00000508108 POTEGQ6S5H5 508 aa11.07□□□□□ -0.64
CBX3P3-201ENST00000508108 GTPBP6O43824 516 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms