RNA–Protein interactions for RNA: ENST00000507905.6

SMN1-206, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 431 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-206ENST00000507905 NUBP1P53384 320 aa17.22■□□□□ 0.35
SMN1-206ENST00000507905 DCBLD2Q96PD2 775 aa17.22■□□□□ 0.35
SMN1-206ENST00000507905 POTEIP0CG38 1075 aa17.18■□□□□ 0.34
SMN1-206ENST00000507905 KLHL34Q8N239 644 aa17.18■□□□□ 0.34
SMN1-206ENST00000507905 FAM212AQ96EL1 285 aa17.13■□□□□ 0.33
SMN1-206ENST00000507905 KIF12Q96FN5 646 aa17.11■□□□□ 0.33
SMN1-206ENST00000507905 MS4A3Q96HJ5 214 aa17.11■□□□□ 0.33
SMN1-206ENST00000507905 DCAF8Q5TAQ9 597 aa17.05■□□□□ 0.32
SMN1-206ENST00000507905 MAP3K13O43283 966 aa17.04■□□□□ 0.32
SMN1-206ENST00000507905 IFNLR1Q8IU57 520 aaPredicted RBP17.01■□□□□ 0.31
SMN1-206ENST00000507905 SGIP1Q9BQI5 828 aa16.94■□□□□ 0.3
SMN1-206ENST00000507905 PCDHB13Q9Y5F0 798 aa16.93■□□□□ 0.3
SMN1-206ENST00000507905 GSE1Q14687 1217 aa16.91■□□□□ 0.3
SMN1-206ENST00000507905 LHX8Q68G74 356 aa16.91■□□□□ 0.3
SMN1-206ENST00000507905 ASTLQ6HA08 431 aaPredicted RBP16.91■□□□□ 0.3
SMN1-206ENST00000507905 SPOCK2Q92563 424 aa16.91■□□□□ 0.3
SMN1-206ENST00000507905 ATMINO43313 823 aaPredicted RBP16.89■□□□□ 0.29
SMN1-206ENST00000507905 PYGBP11216 843 aa16.88■□□□□ 0.29
SMN1-206ENST00000507905 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
SMN1-206ENST00000507905 TRPC6Q9Y210 931 aa16.87■□□□□ 0.29
SMN1-206ENST00000507905 TIE1P35590 1138 aa16.83■□□□□ 0.28
SMN1-206ENST00000507905 IFNL1Q8IU54 200 aa16.82■□□□□ 0.28
SMN1-206ENST00000507905 BMP2KQ9NSY1 1161 aaPredicted RBP16.82■□□□□ 0.28
SMN1-206ENST00000507905 ATN1P54259 1190 aaPredicted RBP16.81■□□□□ 0.28
SMN1-206ENST00000507905 CIZ1Q9ULV3 898 aaPredicted RBP16.78■□□□□ 0.28
SMN1-206ENST00000507905 SLC39A7Q92504 469 aa16.77■□□□□ 0.28
SMN1-206ENST00000507905 C7P10643 843 aa16.75■□□□□ 0.27
SMN1-206ENST00000507905 TTLL13PA6NNM8 815 aa16.74■□□□□ 0.27
SMN1-206ENST00000507905 METRNQ9UJH8 293 aa16.73■□□□□ 0.27
SMN1-206ENST00000507905 CHRM1P11229 460 aaPredicted RBP16.72■□□□□ 0.27
SMN1-206ENST00000507905 PCDHB8Q9UN66 801 aa16.7■□□□□ 0.26
SMN1-206ENST00000507905 TMEM106CQ9BVX2 250 aa16.67■□□□□ 0.26
SMN1-206ENST00000507905 ZNF467Q7Z7K2 595 aaPredicted RBP16.65■□□□□ 0.26
SMN1-206ENST00000507905 TRIM35Q9UPQ4 493 aa16.65■□□□□ 0.26
SMN1-206ENST00000507905 POTEB2H3BUK9 544 aa16.63■□□□□ 0.25
SMN1-206ENST00000507905 SEC24BO95487 1268 aa16.55■□□□□ 0.24
SMN1-206ENST00000507905 IER5LQ5T953 404 aa16.55■□□□□ 0.24
SMN1-206ENST00000507905 TRIM41Q8WV44 630 aa16.55■□□□□ 0.24
SMN1-206ENST00000507905 POTEFA5A3E0 1075 aa16.51■□□□□ 0.23
SMN1-206ENST00000507905 OTUD5Q96G74 571 aa16.5■□□□□ 0.23
SMN1-206ENST00000507905 PSEN1P49768 467 aa16.49■□□□□ 0.23
SMN1-206ENST00000507905 COLQQ9Y215 455 aaPredicted RBP16.49■□□□□ 0.23
SMN1-206ENST00000507905 PDAP1Q13442 181 aaKnown RBP16.46■□□□□ 0.23
SMN1-206ENST00000507905 POTEJP0CG39 1038 aa16.45■□□□□ 0.22
SMN1-206ENST00000507905 MAMSTRQ6ZN01 415 aa16.42■□□□□ 0.22
SMN1-206ENST00000507905 GOLGA2Q08379 1002 aa16.41■□□□□ 0.22
SMN1-206ENST00000507905 PLCG2P16885 1265 aa16.4■□□□□ 0.22
SMN1-206ENST00000507905 IRX5P78411 483 aaPredicted RBP16.38■□□□□ 0.21
SMN1-206ENST00000507905 MKRN3Q13064 507 aaKnown RBP16.36■□□□□ 0.21
SMN1-206ENST00000507905 OCEL1Q9H607 264 aa16.36■□□□□ 0.21
SMN1-206ENST00000507905 SCUBE2Q9NQ36 999 aa16.36■□□□□ 0.21
SMN1-206ENST00000507905 RIOK3O14730 519 aaKnown RBP16.31■□□□□ 0.2
SMN1-206ENST00000507905 RNF25Q96BH1 459 aaPredicted RBP16.28■□□□□ 0.2
SMN1-206ENST00000507905 CABP2Q9NPB3 220 aa16.28■□□□□ 0.2
SMN1-206ENST00000507905 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.25■□□□□ 0.19
SMN1-206ENST00000507905 ECM2O94769 699 aaPredicted RBP16.24■□□□□ 0.19
SMN1-206ENST00000507905 VGFO15240 615 aaPredicted RBP16.22■□□□□ 0.19
SMN1-206ENST00000507905 PKD2Q13563 968 aa16.2■□□□□ 0.18
SMN1-206ENST00000507905 PDCD7Q8N8D1 485 aaKnown RBP16.2■□□□□ 0.18
SMN1-206ENST00000507905 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.18■□□□□ 0.18
SMN1-206ENST00000507905 ZFP91Q96JP5 570 aaPredicted RBP16.18■□□□□ 0.18
SMN1-206ENST00000507905 TAOK2Q9UL54 1235 aa16.17■□□□□ 0.18
SMN1-206ENST00000507905 ILDR1Q86SU0 546 aaPredicted RBP16.13■□□□□ 0.17
SMN1-206ENST00000507905 EFCAB3Q8N7B9 438 aa16.13■□□□□ 0.17
SMN1-206ENST00000507905 L3MBTL3Q96JM7 780 aaPredicted RBP16.13■□□□□ 0.17
SMN1-206ENST00000507905 SLAIN1Q8ND83 568 aa16.1■□□□□ 0.17
SMN1-206ENST00000507905 RGL2O15211 777 aa16.07■□□□□ 0.16
SMN1-206ENST00000507905 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.07■□□□□ 0.16
SMN1-206ENST00000507905 DPY19L2Q6NUT2 758 aa16.06■□□□□ 0.16
SMN1-206ENST00000507905 BCL11BQ9C0K0 894 aaPredicted RBP16.03■□□□□ 0.16
SMN1-206ENST00000507905 SOX12O15370 315 aa16.02■□□□□ 0.16
SMN1-206ENST00000507905 C3orf67Q6ZVT6 689 aa16.02■□□□□ 0.16
SMN1-206ENST00000507905 FAM163AQ96GL9 167 aaPredicted RBP16.02■□□□□ 0.16
SMN1-206ENST00000507905 STK24Q9Y6E0 443 aa16.01■□□□□ 0.15
SMN1-206ENST00000507905 G3V3G9 751 aa16■□□□□ 0.15
SMN1-206ENST00000507905 STK25O00506 426 aa16■□□□□ 0.15
SMN1-206ENST00000507905 BOLA1Q9Y3E2 137 aa15.98■□□□□ 0.15
SMN1-206ENST00000507905 PHF8Q9UPP1 1060 aa15.94■□□□□ 0.14
SMN1-206ENST00000507905 POTEMA6NI47 508 aa15.88■□□□□ 0.13
SMN1-206ENST00000507905 NLRP6P59044 892 aa15.88■□□□□ 0.13
SMN1-206ENST00000507905 MS4A4AQ96JQ5 239 aa15.87■□□□□ 0.13
SMN1-206ENST00000507905 LCE2DQ5TA82 110 aaPredicted RBP15.86■□□□□ 0.13
SMN1-206ENST00000507905 POTEGQ6S5H5 508 aa15.86■□□□□ 0.13
SMN1-206ENST00000507905 SNPHO15079 494 aa15.85■□□□□ 0.13
SMN1-206ENST00000507905 TMEM121BQ9BXQ6 578 aaPredicted RBP15.85■□□□□ 0.13
SMN1-206ENST00000507905 FBXO22Q8NEZ5 403 aa15.81■□□□□ 0.12
SMN1-206ENST00000507905 MFRPQ9BY79 579 aa15.81■□□□□ 0.12
SMN1-206ENST00000507905 MICALL2Q8IY33 904 aa15.8■□□□□ 0.12
SMN1-206ENST00000507905 ST18O60284 1047 aa15.78■□□□□ 0.12
SMN1-206ENST00000507905 CHGAP10645 457 aaKnown RBP15.73■□□□□ 0.11
SMN1-206ENST00000507905 HS6ST3Q8IZP7 471 aa15.73■□□□□ 0.11
SMN1-206ENST00000507905 TMEM92Q6UXU6 159 aa15.64■□□□□ 0.09
SMN1-206ENST00000507905 PCDH10Q9P2E7 1040 aa15.64■□□□□ 0.09
SMN1-206ENST00000507905 HOXB3P14651 431 aaPredicted RBP15.58■□□□□ 0.08
SMN1-206ENST00000507905 MARVELD3Q96A59 401 aa15.58■□□□□ 0.08
SMN1-206ENST00000507905 PPP1R37O75864 691 aa15.57■□□□□ 0.08
SMN1-206ENST00000507905 DCAF8L2P0C7V8 631 aa15.56■□□□□ 0.08
SMN1-206ENST00000507905 DOK7Q18PE1 504 aa15.56■□□□□ 0.08
SMN1-206ENST00000507905 ZNF710Q8N1W2 664 aa15.56■□□□□ 0.08
SMN1-206ENST00000507905 DNAJC5Q9H3Z4 198 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms