RNA–Protein interactions for RNA: ENST00000507245.1

SMAD5-203, Transcript of SMAD family member 5, humanhuman

TSL 2

Gene SMAD5, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-203ENST00000507245 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMAD5-203ENST00000507245 PLCB2Q00722 1185 aa13.19□□□□□ -0.3
SMAD5-203ENST00000507245 TAOK2Q9UL54 1235 aa13.19□□□□□ -0.3
SMAD5-203ENST00000507245 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.18□□□□□ -0.3
SMAD5-203ENST00000507245 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
SMAD5-203ENST00000507245 BBXQ8WY36 941 aaPredicted RBP13.16□□□□□ -0.3
SMAD5-203ENST00000507245 CHGAP10645 457 aaKnown RBP13.14□□□□□ -0.31
SMAD5-203ENST00000507245 TSPYL2Q9H2G4 693 aaPredicted RBP13.14□□□□□ -0.31
SMAD5-203ENST00000507245 RIOK3O14730 519 aaKnown RBP13.12□□□□□ -0.31
SMAD5-203ENST00000507245 CHRM1P11229 460 aaPredicted RBP13.12□□□□□ -0.31
SMAD5-203ENST00000507245 PYGBP11216 843 aa13.11□□□□□ -0.31
SMAD5-203ENST00000507245 PAK3O75914 559 aaPredicted RBP13.1□□□□□ -0.31
SMAD5-203ENST00000507245 RNF25Q96BH1 459 aaPredicted RBP13.09□□□□□ -0.31
SMAD5-203ENST00000507245 HAP1P54257 671 aaPredicted RBP13.05□□□□□ -0.32
SMAD5-203ENST00000507245 VGFO15240 615 aaPredicted RBP13.04□□□□□ -0.32
SMAD5-203ENST00000507245 HS6ST3Q8IZP7 471 aa13.03□□□□□ -0.32
SMAD5-203ENST00000507245 PAXIP1Q6ZW49 1069 aaPredicted RBP13.02□□□□□ -0.33
SMAD5-203ENST00000507245 CFAP44Q96MT7 982 aa13.02□□□□□ -0.33
SMAD5-203ENST00000507245 STK25O00506 426 aa12.99□□□□□ -0.33
SMAD5-203ENST00000507245 SPRYD3Q8NCJ5 442 aa12.99□□□□□ -0.33
SMAD5-203ENST00000507245 ZNF467Q7Z7K2 595 aaPredicted RBP12.97□□□□□ -0.33
SMAD5-203ENST00000507245 CCDC61Q9Y6R9 512 aa12.95□□□□□ -0.34
SMAD5-203ENST00000507245 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.92□□□□□ -0.34
SMAD5-203ENST00000507245 ZFP91Q96JP5 570 aaPredicted RBP12.92□□□□□ -0.34
SMAD5-203ENST00000507245 SGIP1Q9BQI5 828 aa12.92□□□□□ -0.34
SMAD5-203ENST00000507245 STK24Q9Y6E0 443 aa12.91□□□□□ -0.34
SMAD5-203ENST00000507245 CD44P16070 742 aaKnown RBP12.9□□□□□ -0.34
SMAD5-203ENST00000507245 ZRANB1Q9UGI0 708 aa12.9□□□□□ -0.34
SMAD5-203ENST00000507245 BCL11BQ9C0K0 894 aaPredicted RBP12.89□□□□□ -0.35
SMAD5-203ENST00000507245 DNAJC5Q9H3Z4 198 aa12.88□□□□□ -0.35
SMAD5-203ENST00000507245 PCDHB13Q9Y5F0 798 aa12.87□□□□□ -0.35
SMAD5-203ENST00000507245 PDAP1Q13442 181 aaKnown RBP12.86□□□□□ -0.35
SMAD5-203ENST00000507245 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
SMAD5-203ENST00000507245 POTEHQ6S545 545 aa12.85□□□□□ -0.35
SMAD5-203ENST00000507245 PCDHB8Q9UN66 801 aa12.85□□□□□ -0.35
SMAD5-203ENST00000507245 VSIG10Q8N0Z9 540 aa12.82□□□□□ -0.36
SMAD5-203ENST00000507245 MAP3K13O43283 966 aa12.81□□□□□ -0.36
SMAD5-203ENST00000507245 KIF12Q96FN5 646 aa12.81□□□□□ -0.36
SMAD5-203ENST00000507245 RYDENQ9NUL5 291 aaKnown RBP12.81□□□□□ -0.36
SMAD5-203ENST00000507245 PSEN1P49768 467 aa12.79□□□□□ -0.36
SMAD5-203ENST00000507245 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.37
SMAD5-203ENST00000507245 IFNL1Q8IU54 200 aa12.77□□□□□ -0.37
SMAD5-203ENST00000507245 PHF12Q96QT6 1004 aa12.75□□□□□ -0.37
SMAD5-203ENST00000507245 C19orf67A6NJJ6 358 aa12.74□□□□□ -0.37
SMAD5-203ENST00000507245 HAX1O00165 279 aa12.73□□□□□ -0.37
SMAD5-203ENST00000507245 GTPBP6O43824 516 aaPredicted RBP12.73□□□□□ -0.37
SMAD5-203ENST00000507245 EVX2Q03828 476 aa12.72□□□□□ -0.37
SMAD5-203ENST00000507245 TSHZ2Q9NRE2 1034 aa12.72□□□□□ -0.37
SMAD5-203ENST00000507245 CABP2Q9NPB3 220 aa12.64□□□□□ -0.39
SMAD5-203ENST00000507245 GOLGA2Q08379 1002 aa12.63□□□□□ -0.39
SMAD5-203ENST00000507245 KDM2AQ9Y2K7 1162 aa12.63□□□□□ -0.39
SMAD5-203ENST00000507245 MS4A3Q96HJ5 214 aa12.61□□□□□ -0.39
SMAD5-203ENST00000507245 TMEM106CQ9BVX2 250 aa12.59□□□□□ -0.39
SMAD5-203ENST00000507245 SOX12O15370 315 aa12.58□□□□□ -0.4
SMAD5-203ENST00000507245 EFCAB3Q8N7B9 438 aa12.58□□□□□ -0.4
SMAD5-203ENST00000507245 CLCN6P51797 869 aa12.57□□□□□ -0.4
SMAD5-203ENST00000507245 NLRP6P59044 892 aa12.56□□□□□ -0.4
SMAD5-203ENST00000507245 MFRPQ9BY79 579 aa12.56□□□□□ -0.4
SMAD5-203ENST00000507245 BCANQ96GW7 911 aa12.54□□□□□ -0.4
SMAD5-203ENST00000507245 TIE1P35590 1138 aa12.52□□□□□ -0.41
SMAD5-203ENST00000507245 MKRN3Q13064 507 aaKnown RBP12.52□□□□□ -0.41
SMAD5-203ENST00000507245 TRPC6Q9Y210 931 aa12.5□□□□□ -0.41
SMAD5-203ENST00000507245 PHF8Q9UPP1 1060 aa12.49□□□□□ -0.41
SMAD5-203ENST00000507245 GALR2O43603 387 aaPredicted RBP12.47□□□□□ -0.41
SMAD5-203ENST00000507245 TTLL13PA6NNM8 815 aa12.46□□□□□ -0.41
SMAD5-203ENST00000507245 FBXO22Q8NEZ5 403 aa12.46□□□□□ -0.41
SMAD5-203ENST00000507245 BMP2KQ9NSY1 1161 aaPredicted RBP12.43□□□□□ -0.42
SMAD5-203ENST00000507245 WDR70Q9NW82 654 aa12.41□□□□□ -0.42
SMAD5-203ENST00000507245 TRIM35Q9UPQ4 493 aa12.4□□□□□ -0.42
SMAD5-203ENST00000507245 PPP1R37O75864 691 aa12.39□□□□□ -0.43
SMAD5-203ENST00000507245 GABBR2O75899 941 aa12.37□□□□□ -0.43
SMAD5-203ENST00000507245 NBR1Q14596 966 aa12.37□□□□□ -0.43
SMAD5-203ENST00000507245 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.37□□□□□ -0.434e-12■□□□□ 9.3
SMAD5-203ENST00000507245 SP7Q8TDD2 431 aaPredicted RBP12.36□□□□□ -0.43
SMAD5-203ENST00000507245 CADPS2Q86UW7 1296 aa12.34□□□□□ -0.43
SMAD5-203ENST00000507245 MS4A4AQ96JQ5 239 aa12.34□□□□□ -0.43
SMAD5-203ENST00000507245 CCDC180Q9P1Z9 1646 aa12.33□□□□□ -0.43
SMAD5-203ENST00000507245 ATN1P54259 1190 aaPredicted RBP12.31□□□□□ -0.44
SMAD5-203ENST00000507245 P3H3Q8IVL6 736 aa12.31□□□□□ -0.44
SMAD5-203ENST00000507245 ATMINO43313 823 aaPredicted RBP12.3□□□□□ -0.44
SMAD5-203ENST00000507245 ASTLQ6HA08 431 aaPredicted RBP12.29□□□□□ -0.44
SMAD5-203ENST00000507245 DCBLD2Q96PD2 775 aa12.29□□□□□ -0.44
SMAD5-203ENST00000507245 IER5LQ5T953 404 aa12.26□□□□□ -0.45
SMAD5-203ENST00000507245 PDE4AP27815 886 aa12.25□□□□□ -0.45
SMAD5-203ENST00000507245 ILDR1Q86SU0 546 aaPredicted RBP12.25□□□□□ -0.45
SMAD5-203ENST00000507245 G3V3G9 751 aa12.23□□□□□ -0.45
SMAD5-203ENST00000507245 OCEL1Q9H607 264 aa12.23□□□□□ -0.45
SMAD5-203ENST00000507245 PLCG2P16885 1265 aa12.21□□□□□ -0.45
SMAD5-203ENST00000507245 LARP6Q9BRS8 491 aaKnown RBP12.21□□□□□ -0.45
SMAD5-203ENST00000507245 SEC24BO95487 1268 aa12.19□□□□□ -0.46
SMAD5-203ENST00000507245 IRX5P78411 483 aaPredicted RBP12.19□□□□□ -0.46
SMAD5-203ENST00000507245 DPY19L2Q6NUT2 758 aa12.18□□□□□ -0.46
SMAD5-203ENST00000507245 POTEIP0CG38 1075 aa12.17□□□□□ -0.46
SMAD5-203ENST00000507245 E2F4Q16254 413 aa12.17□□□□□ -0.46
SMAD5-203ENST00000507245 PDCD7Q8N8D1 485 aaKnown RBP12.17□□□□□ -0.46
SMAD5-203ENST00000507245 NCKAP5LQ9HCH0 1330 aa12.16□□□□□ -0.46
SMAD5-203ENST00000507245 KCNV2Q8TDN2 545 aa12.16□□□□□ -0.46
SMAD5-203ENST00000507245 DDX27Q96GQ7 796 aaKnown RBP12.16□□□□□ -0.46
SMAD5-203ENST00000507245 CRISPLD2Q9H0B8 497 aa12.15□□□□□ -0.46
SMAD5-203ENST00000507245 MICALL2Q8IY33 904 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms