RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 SCUBE2Q9NQ36 999 aa13.75□□□□□ -0.21
SSBP2-206ENST00000506960 FAM163AQ96GL9 167 aaPredicted RBP13.72□□□□□ -0.21
SSBP2-206ENST00000506960 ATMINO43313 823 aaPredicted RBP13.68□□□□□ -0.22
SSBP2-206ENST00000506960 POTEJP0CG39 1038 aa13.64□□□□□ -0.23
SSBP2-206ENST00000506960 LCE2DQ5TA82 110 aaPredicted RBP13.63□□□□□ -0.23
SSBP2-206ENST00000506960 MS4A3Q96HJ5 214 aa13.6□□□□□ -0.23
SSBP2-206ENST00000506960 MNX1P50219 401 aaPredicted RBP13.51□□□□□ -0.25
SSBP2-206ENST00000506960 CDAN1Q8IWY9 1227 aa13.5□□□□□ -0.25
SSBP2-206ENST00000506960 ATN1P54259 1190 aaPredicted RBP13.46□□□□□ -0.25
SSBP2-206ENST00000506960 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
SSBP2-206ENST00000506960 CSRNP3Q8WYN3 585 aa13.38□□□□□ -0.27
SSBP2-206ENST00000506960 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
SSBP2-206ENST00000506960 SEC24BO95487 1268 aa13.35□□□□□ -0.27
SSBP2-206ENST00000506960 TSPYL2Q9H2G4 693 aaPredicted RBP13.35□□□□□ -0.27
SSBP2-206ENST00000506960 TIE1P35590 1138 aa13.34□□□□□ -0.27
SSBP2-206ENST00000506960 POTEFA5A3E0 1075 aa13.33□□□□□ -0.28
SSBP2-206ENST00000506960 BMP2KQ9NSY1 1161 aaPredicted RBP13.33□□□□□ -0.28
SSBP2-206ENST00000506960 CCDC61Q9Y6R9 512 aa13.33□□□□□ -0.28
SSBP2-206ENST00000506960 KIF12Q96FN5 646 aa13.32□□□□□ -0.28
SSBP2-206ENST00000506960 IER5LQ5T953 404 aa13.24□□□□□ -0.29
SSBP2-206ENST00000506960 MMRN1Q13201 1228 aa13.23□□□□□ -0.29
SSBP2-206ENST00000506960 ST18O60284 1047 aa13.22□□□□□ -0.29
SSBP2-206ENST00000506960 SLAIN1Q8ND83 568 aa13.2□□□□□ -0.3
SSBP2-206ENST00000506960 COLQQ9Y215 455 aaPredicted RBP13.2□□□□□ -0.3
SSBP2-206ENST00000506960 SPNS2Q8IVW8 549 aa13.18□□□□□ -0.3
SSBP2-206ENST00000506960 TTLL13PA6NNM8 815 aa13.17□□□□□ -0.3
SSBP2-206ENST00000506960 MAP3K13O43283 966 aa13.17□□□□□ -0.3
SSBP2-206ENST00000506960 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
SSBP2-206ENST00000506960 PLEKHG5O94827 1062 aa13.15□□□□□ -0.3
SSBP2-206ENST00000506960 TRPC6Q9Y210 931 aa13.15□□□□□ -0.3
SSBP2-206ENST00000506960 SGIP1Q9BQI5 828 aa13.12□□□□□ -0.31
SSBP2-206ENST00000506960 SNPHO15079 494 aa13.1□□□□□ -0.31
SSBP2-206ENST00000506960 TRIM35Q9UPQ4 493 aa13.1□□□□□ -0.31
SSBP2-206ENST00000506960 PLCG2P16885 1265 aa13.03□□□□□ -0.32
SSBP2-206ENST00000506960 PCDHB13Q9Y5F0 798 aa12.99□□□□□ -0.33
SSBP2-206ENST00000506960 RASEFQ8IZ41 740 aa12.97□□□□□ -0.33
SSBP2-206ENST00000506960 MIER1Q8N108 512 aa12.93□□□□□ -0.34
SSBP2-206ENST00000506960 PROM2Q8N271 834 aa12.91□□□□□ -0.34
SSBP2-206ENST00000506960 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.91□□□□□ -0.34
SSBP2-206ENST00000506960 TMEM106CQ9BVX2 250 aa12.89□□□□□ -0.35
SSBP2-206ENST00000506960 IRX5P78411 483 aaPredicted RBP12.87□□□□□ -0.35
SSBP2-206ENST00000506960 MARVELD3Q96A59 401 aa12.87□□□□□ -0.35
SSBP2-206ENST00000506960 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
SSBP2-206ENST00000506960 ZBTB47Q9UFB7 747 aaPredicted RBP12.83□□□□□ -0.36
SSBP2-206ENST00000506960 IFNL1Q8IU54 200 aa12.82□□□□□ -0.36
SSBP2-206ENST00000506960 EMP3P54852 163 aa12.8□□□□□ -0.36
SSBP2-206ENST00000506960 PLCD3Q8N3E9 789 aa12.73□□□□□ -0.37
SSBP2-206ENST00000506960 FAM212AQ96EL1 285 aa12.73□□□□□ -0.37
SSBP2-206ENST00000506960 HS3ST6Q96QI5 342 aa12.71□□□□□ -0.37
SSBP2-206ENST00000506960 KRTAP3-3Q9BYR6 98 aa12.7□□□□□ -0.38
SSBP2-206ENST00000506960 KRTAP3-2Q9BYR7 98 aa12.7□□□□□ -0.38
SSBP2-206ENST00000506960 C3orf67Q6ZVT6 689 aa12.69□□□□□ -0.38
SSBP2-206ENST00000506960 NUBP1P53384 320 aa12.68□□□□□ -0.38
SSBP2-206ENST00000506960 FAM205CA6NFA0 338 aa12.66□□□□□ -0.38
SSBP2-206ENST00000506960 L3MBTL3Q96JM7 780 aaPredicted RBP12.66□□□□□ -0.38
SSBP2-206ENST00000506960 POTEB3A0JP26 581 aa12.57□□□□□ -0.4
SSBP2-206ENST00000506960 POTEBQ6S5H4 581 aa12.57□□□□□ -0.4
SSBP2-206ENST00000506960 GOLGA2Q08379 1002 aa12.54□□□□□ -0.4
SSBP2-206ENST00000506960 RNF166Q96A37 237 aaPredicted RBP12.53□□□□□ -0.4
SSBP2-206ENST00000506960 MKRN3Q13064 507 aaKnown RBP12.52□□□□□ -0.41
SSBP2-206ENST00000506960 PDCD7Q8N8D1 485 aaKnown RBP12.52□□□□□ -0.41
SSBP2-206ENST00000506960 DCAF8Q5TAQ9 597 aa12.47□□□□□ -0.41
SSBP2-206ENST00000506960 PYGBP11216 843 aa12.45□□□□□ -0.42
SSBP2-206ENST00000506960 PCDHB8Q9UN66 801 aa12.44□□□□□ -0.42
SSBP2-206ENST00000506960 ZNF710Q8N1W2 664 aa12.42□□□□□ -0.42
SSBP2-206ENST00000506960 MYT1LQ9UL68 1186 aa12.42□□□□□ -0.42
SSBP2-206ENST00000506960 ERBB3P21860 1342 aa12.41□□□□□ -0.42
SSBP2-206ENST00000506960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.41□□□□□ -0.42
SSBP2-206ENST00000506960 HOXB1P14653 301 aaPredicted RBP12.4□□□□□ -0.42
SSBP2-206ENST00000506960 ZNF467Q7Z7K2 595 aaPredicted RBP12.4□□□□□ -0.42
SSBP2-206ENST00000506960 PTGER2P43116 358 aa12.39□□□□□ -0.43
SSBP2-206ENST00000506960 G3V3G9 751 aa12.38□□□□□ -0.43
SSBP2-206ENST00000506960 DOK7Q18PE1 504 aa12.36□□□□□ -0.43
SSBP2-206ENST00000506960 RIMBP2O15034 1052 aa12.33□□□□□ -0.44
SSBP2-206ENST00000506960 HOXB3P14651 431 aaPredicted RBP12.33□□□□□ -0.44
SSBP2-206ENST00000506960 ILDR1Q86SU0 546 aaPredicted RBP12.28□□□□□ -0.44
SSBP2-206ENST00000506960 BOLA1Q9Y3E2 137 aa12.27□□□□□ -0.45
SSBP2-206ENST00000506960 GSE1Q14687 1217 aa12.26□□□□□ -0.45
SSBP2-206ENST00000506960 VARS2Q5ST30 1063 aaKnown RBP12.25□□□□□ -0.45
SSBP2-206ENST00000506960 ZNF687Q8N1G0 1237 aa12.24□□□□□ -0.45
SSBP2-206ENST00000506960 PSEN1P49768 467 aa12.22□□□□□ -0.45
SSBP2-206ENST00000506960 CHRM1P11229 460 aaPredicted RBP12.21□□□□□ -0.45
SSBP2-206ENST00000506960 ZSWIM6Q9HCJ5 1215 aa12.21□□□□□ -0.45
SSBP2-206ENST00000506960 DPY19L2Q6NUT2 758 aa12.16□□□□□ -0.46
SSBP2-206ENST00000506960 PDAP1Q13442 181 aaKnown RBP12.13□□□□□ -0.47
SSBP2-206ENST00000506960 FKBP8Q14318 412 aa12.1□□□□□ -0.47
SSBP2-206ENST00000506960 ANKRD13DQ6ZTN6 518 aa12.08□□□□□ -0.48
SSBP2-206ENST00000506960 CABP2Q9NPB3 220 aa12.06□□□□□ -0.48
SSBP2-206ENST00000506960 PLA2G2EQ9NZK7 142 aa12.06□□□□□ -0.48
SSBP2-206ENST00000506960 FBXO3Q9UK99 471 aa12.05□□□□□ -0.48
SSBP2-206ENST00000506960 GPR153Q6NV75 609 aa12.01□□□□□ -0.49
SSBP2-206ENST00000506960 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
SSBP2-206ENST00000506960 HCSTQ9UBK5 93 aa12□□□□□ -0.49
SSBP2-206ENST00000506960 LSM11P83369 360 aaKnown RBP eCLIP11.97□□□□□ -0.49
SSBP2-206ENST00000506960 PBX2P40425 430 aa11.92□□□□□ -0.5
SSBP2-206ENST00000506960 ZNF316A6NFI3 1004 aaPredicted RBP11.91□□□□□ -0.5
SSBP2-206ENST00000506960 MICALL2Q8IY33 904 aa11.88□□□□□ -0.51
SSBP2-206ENST00000506960 ARSIQ5FYB1 569 aa11.87□□□□□ -0.51
SSBP2-206ENST00000506960 TMEM92Q6UXU6 159 aa11.84□□□□□ -0.51
SSBP2-206ENST00000506960 RGS20O76081 388 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms