RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 CCDC61Q9Y6R9 512 aa8.06□□□□□ -1.12
GYPB-207ENST00000506679 CHRM1P11229 460 aaPredicted RBP8.05□□□□□ -1.12
GYPB-207ENST00000506679 SP7Q8TDD2 431 aaPredicted RBP8.04□□□□□ -1.12
GYPB-207ENST00000506679 TSPYL2Q9H2G4 693 aaPredicted RBP8.04□□□□□ -1.12
GYPB-207ENST00000506679 CD44P16070 742 aaKnown RBP8.03□□□□□ -1.12
GYPB-207ENST00000506679 RGL2O15211 777 aa8.01□□□□□ -1.13
GYPB-207ENST00000506679 PAK3O75914 559 aaPredicted RBP8.01□□□□□ -1.13
GYPB-207ENST00000506679 RNF25Q96BH1 459 aaPredicted RBP8.01□□□□□ -1.13
GYPB-207ENST00000506679 PYGBP11216 843 aa7.99□□□□□ -1.13
GYPB-207ENST00000506679 ZRANB1Q9UGI0 708 aa7.98□□□□□ -1.13
GYPB-207ENST00000506679 ZNF579Q8NAF0 562 aaKnown RBP7.97□□□□□ -1.13
GYPB-207ENST00000506679 KIF12Q96FN5 646 aa7.96□□□□□ -1.14
GYPB-207ENST00000506679 EVX2Q03828 476 aa7.95□□□□□ -1.14
GYPB-207ENST00000506679 HAX1O00165 279 aa7.94□□□□□ -1.14
GYPB-207ENST00000506679 SGIP1Q9BQI5 828 aa7.94□□□□□ -1.14
GYPB-207ENST00000506679 RIOK3O14730 519 aaKnown RBP7.93□□□□□ -1.14
GYPB-207ENST00000506679 PHF12Q96QT6 1004 aa7.93□□□□□ -1.14
GYPB-207ENST00000506679 MAP3K13O43283 966 aa7.92□□□□□ -1.14
GYPB-207ENST00000506679 ZNF467Q7Z7K2 595 aaPredicted RBP7.91□□□□□ -1.14
GYPB-207ENST00000506679 VGFO15240 615 aaPredicted RBP7.9□□□□□ -1.14
GYPB-207ENST00000506679 IFNL1Q8IU54 200 aa7.89□□□□□ -1.15
GYPB-207ENST00000506679 PCDHB13Q9Y5F0 798 aa7.89□□□□□ -1.15
GYPB-207ENST00000506679 CLCN6P51797 869 aa7.87□□□□□ -1.15
GYPB-207ENST00000506679 TAOK2Q9UL54 1235 aa7.87□□□□□ -1.15
GYPB-207ENST00000506679 PCDHB8Q9UN66 801 aa7.87□□□□□ -1.15
GYPB-207ENST00000506679 DCAF8L2P0C7V8 631 aa7.86□□□□□ -1.15
GYPB-207ENST00000506679 HS6ST3Q8IZP7 471 aa7.86□□□□□ -1.15
GYPB-207ENST00000506679 MS4A3Q96HJ5 214 aa7.86□□□□□ -1.15
GYPB-207ENST00000506679 DNAJC5Q9H3Z4 198 aa7.85□□□□□ -1.15
GYPB-207ENST00000506679 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.84□□□□□ -1.15
GYPB-207ENST00000506679 PDAP1Q13442 181 aaKnown RBP7.84□□□□□ -1.15
GYPB-207ENST00000506679 ZFP91Q96JP5 570 aaPredicted RBP7.84□□□□□ -1.15
GYPB-207ENST00000506679 GALR2O43603 387 aaPredicted RBP7.82□□□□□ -1.16
GYPB-207ENST00000506679 CHGAP10645 457 aaKnown RBP7.82□□□□□ -1.16
GYPB-207ENST00000506679 PSEN1P49768 467 aa7.81□□□□□ -1.16
GYPB-207ENST00000506679 TRPC6Q9Y210 931 aa7.81□□□□□ -1.16
GYPB-207ENST00000506679 STK25O00506 426 aa7.8□□□□□ -1.16
GYPB-207ENST00000506679 BBXQ8WY36 941 aaPredicted RBP7.8□□□□□ -1.16
GYPB-207ENST00000506679 GABBR2O75899 941 aa7.79□□□□□ -1.16
GYPB-207ENST00000506679 BCL11BQ9C0K0 894 aaPredicted RBP7.79□□□□□ -1.16
GYPB-207ENST00000506679 TIE1P35590 1138 aa7.78□□□□□ -1.16
GYPB-207ENST00000506679 STK24Q9Y6E0 443 aa7.76□□□□□ -1.17
GYPB-207ENST00000506679 TTLL13PA6NNM8 815 aa7.75□□□□□ -1.17
GYPB-207ENST00000506679 NKX1-1Q15270 411 aaPredicted RBP7.75□□□□□ -1.17
GYPB-207ENST00000506679 BMP2KQ9NSY1 1161 aaPredicted RBP7.75□□□□□ -1.17
GYPB-207ENST00000506679 TMEM106CQ9BVX2 250 aa7.74□□□□□ -1.17
GYPB-207ENST00000506679 PLCB2Q00722 1185 aa7.72□□□□□ -1.17
GYPB-207ENST00000506679 ASTLQ6HA08 431 aaPredicted RBP7.72□□□□□ -1.17
GYPB-207ENST00000506679 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.71□□□□□ -1.18
GYPB-207ENST00000506679 ATMINO43313 823 aaPredicted RBP7.7□□□□□ -1.18
GYPB-207ENST00000506679 CABP2Q9NPB3 220 aa7.7□□□□□ -1.18
GYPB-207ENST00000506679 ATN1P54259 1190 aaPredicted RBP7.69□□□□□ -1.18
GYPB-207ENST00000506679 EFCAB3Q8N7B9 438 aa7.69□□□□□ -1.18
GYPB-207ENST00000506679 GTPBP6O43824 516 aaPredicted RBP7.68□□□□□ -1.18
GYPB-207ENST00000506679 ILDR1Q86SU0 546 aaPredicted RBP7.67□□□□□ -1.18
GYPB-207ENST00000506679 MFRPQ9BY79 579 aa7.67□□□□□ -1.18
GYPB-207ENST00000506679 TRIM35Q9UPQ4 493 aa7.67□□□□□ -1.18
GYPB-207ENST00000506679 SOX12O15370 315 aa7.66□□□□□ -1.18
GYPB-207ENST00000506679 POTEIP0CG38 1075 aa7.66□□□□□ -1.18
GYPB-207ENST00000506679 SPRYD3Q8NCJ5 442 aa7.66□□□□□ -1.18
GYPB-207ENST00000506679 FBXO22Q8NEZ5 403 aa7.66□□□□□ -1.18
GYPB-207ENST00000506679 PAXIP1Q6ZW49 1069 aaPredicted RBP7.65□□□□□ -1.18
GYPB-207ENST00000506679 RYDENQ9NUL5 291 aaKnown RBP7.64□□□□□ -1.19
GYPB-207ENST00000506679 IER5LQ5T953 404 aa7.63□□□□□ -1.19
GYPB-207ENST00000506679 PELP1Q8IZL8 1130 aaKnown RBP7.63□□□□□ -1.19
GYPB-207ENST00000506679 DCBLD2Q96PD2 775 aa7.63□□□□□ -1.19
GYPB-207ENST00000506679 GOLGA2Q08379 1002 aa7.62□□□□□ -1.19
GYPB-207ENST00000506679 MKRN3Q13064 507 aaKnown RBP7.62□□□□□ -1.19
GYPB-207ENST00000506679 MS4A4AQ96JQ5 239 aa7.62□□□□□ -1.19
GYPB-207ENST00000506679 CFAP44Q96MT7 982 aa7.62□□□□□ -1.19
GYPB-207ENST00000506679 PHF8Q9UPP1 1060 aa7.62□□□□□ -1.19
GYPB-207ENST00000506679 NLRP6P59044 892 aa7.61□□□□□ -1.19
GYPB-207ENST00000506679 IRX5P78411 483 aaPredicted RBP7.61□□□□□ -1.19
GYPB-207ENST00000506679 SLC24A1O60721 1099 aa7.59□□□□□ -1.19
GYPB-207ENST00000506679 PDCD7Q8N8D1 485 aaKnown RBP7.59□□□□□ -1.19
GYPB-207ENST00000506679 SLC39A7Q92504 469 aa7.57□□□□□ -1.2
GYPB-207ENST00000506679 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.57□□□□□ -1.2
GYPB-207ENST00000506679 PPP1R37O75864 691 aa7.56□□□□□ -1.2
GYPB-207ENST00000506679 POTEFA5A3E0 1075 aa7.55□□□□□ -1.2
GYPB-207ENST00000506679 C7P10643 843 aa7.55□□□□□ -1.2
GYPB-207ENST00000506679 OCEL1Q9H607 264 aa7.55□□□□□ -1.2
GYPB-207ENST00000506679 TSHZ2Q9NRE2 1034 aa7.54□□□□□ -1.2
GYPB-207ENST00000506679 METRNQ9UJH8 293 aa7.54□□□□□ -1.2
GYPB-207ENST00000506679 COLQQ9Y215 455 aaPredicted RBP7.54□□□□□ -1.2
GYPB-207ENST00000506679 HAP1P54257 671 aaPredicted RBP7.53□□□□□ -1.2
GYPB-207ENST00000506679 LHX8Q68G74 356 aa7.53□□□□□ -1.2
GYPB-207ENST00000506679 DPY19L2Q6NUT2 758 aa7.52□□□□□ -1.21
GYPB-207ENST00000506679 PLCG2P16885 1265 aa7.51□□□□□ -1.21
GYPB-207ENST00000506679 TMEM121BQ9BXQ6 578 aaPredicted RBP7.49□□□□□ -1.21
GYPB-207ENST00000506679 SEC24BO95487 1268 aa7.48□□□□□ -1.21
GYPB-207ENST00000506679 CADPS2Q86UW7 1296 aa7.47□□□□□ -1.21
GYPB-207ENST00000506679 MICALL2Q8IY33 904 aa7.47□□□□□ -1.21
GYPB-207ENST00000506679 VSIG10Q8N0Z9 540 aa7.47□□□□□ -1.21
GYPB-207ENST00000506679 KDM2AQ9Y2K7 1162 aa7.46□□□□□ -1.22
GYPB-207ENST00000506679 BOLA1Q9Y3E2 137 aa7.45□□□□□ -1.22
GYPB-207ENST00000506679 L3MBTL3Q96JM7 780 aaPredicted RBP7.44□□□□□ -1.22
GYPB-207ENST00000506679 CRISPLD2Q9H0B8 497 aa7.42□□□□□ -1.22
GYPB-207ENST00000506679 NCKAP5LQ9HCH0 1330 aa7.42□□□□□ -1.22
GYPB-207ENST00000506679 POTEB2H3BUK9 544 aa7.41□□□□□ -1.22
GYPB-207ENST00000506679 POTEJP0CG39 1038 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms