RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 ASTLQ6HA08 431 aaPredicted RBP16.6■□□□□ 0.25
CHD1-204ENST00000505982 PELP1Q8IZL8 1130 aaKnown RBP16.59■□□□□ 0.25
CHD1-204ENST00000505982 ATMINO43313 823 aaPredicted RBP16.56■□□□□ 0.24
CHD1-204ENST00000505982 KIF12Q96FN5 646 aa16.56■□□□□ 0.24
CHD1-204ENST00000505982 ZBTB47Q9UFB7 747 aaPredicted RBP16.56■□□□□ 0.24
CHD1-204ENST00000505982 RASEFQ8IZ41 740 aa16.55■□□□□ 0.24
CHD1-204ENST00000505982 POTEB2H3BUK9 544 aa16.52■□□□□ 0.24
CHD1-204ENST00000505982 SLC39A7Q92504 469 aa16.52■□□□□ 0.24
CHD1-204ENST00000505982 C7P10643 843 aa16.5■□□□□ 0.23
CHD1-204ENST00000505982 METRNQ9UJH8 293 aa16.5■□□□□ 0.23
CHD1-204ENST00000505982 OTUD5Q96G74 571 aa16.48■□□□□ 0.23
CHD1-204ENST00000505982 MAP3K13O43283 966 aa16.46■□□□□ 0.23
CHD1-204ENST00000505982 ATN1P54259 1190 aaPredicted RBP16.43■□□□□ 0.22
CHD1-204ENST00000505982 NUBP1P53384 320 aa16.4■□□□□ 0.22
CHD1-204ENST00000505982 TIE1P35590 1138 aa16.38■□□□□ 0.21
CHD1-204ENST00000505982 BMP2KQ9NSY1 1161 aaPredicted RBP16.38■□□□□ 0.21
CHD1-204ENST00000505982 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
CHD1-204ENST00000505982 TRPC6Q9Y210 931 aa16.36■□□□□ 0.21
CHD1-204ENST00000505982 SGIP1Q9BQI5 828 aa16.35■□□□□ 0.21
CHD1-204ENST00000505982 FAM212AQ96EL1 285 aa16.33■□□□□ 0.2
CHD1-204ENST00000505982 PCDHB13Q9Y5F0 798 aa16.32■□□□□ 0.2
CHD1-204ENST00000505982 MAMSTRQ6ZN01 415 aa16.31■□□□□ 0.2
CHD1-204ENST00000505982 TTLL13PA6NNM8 815 aa16.26■□□□□ 0.19
CHD1-204ENST00000505982 POTEJP0CG39 1038 aa16.26■□□□□ 0.19
CHD1-204ENST00000505982 SCUBE2Q9NQ36 999 aa16.22■□□□□ 0.19
CHD1-204ENST00000505982 DCAF8Q5TAQ9 597 aa16.2■□□□□ 0.18
CHD1-204ENST00000505982 POTEFA5A3E0 1075 aa16.19■□□□□ 0.18
CHD1-204ENST00000505982 SEC24BO95487 1268 aa16.19■□□□□ 0.18
CHD1-204ENST00000505982 IFNL1Q8IU54 200 aa16.19■□□□□ 0.18
CHD1-204ENST00000505982 TRIM35Q9UPQ4 493 aa16.17■□□□□ 0.18
CHD1-204ENST00000505982 IER5LQ5T953 404 aa16.14■□□□□ 0.17
CHD1-204ENST00000505982 TMEM106CQ9BVX2 250 aa16.11■□□□□ 0.17
CHD1-204ENST00000505982 COLQQ9Y215 455 aaPredicted RBP16.11■□□□□ 0.17
CHD1-204ENST00000505982 KLHL34Q8N239 644 aa16.1■□□□□ 0.17
CHD1-204ENST00000505982 PYGBP11216 843 aa16.09■□□□□ 0.17
CHD1-204ENST00000505982 VASPP50552 380 aaPredicted RBP16.09■□□□□ 0.17
CHD1-204ENST00000505982 POTEMA6NI47 508 aa16.08■□□□□ 0.16
CHD1-204ENST00000505982 POTEGQ6S5H5 508 aa16.04■□□□□ 0.16
CHD1-204ENST00000505982 PLSCR2Q9NRY7 297 aa16.02■□□□□ 0.16
CHD1-204ENST00000505982 GSE1Q14687 1217 aa16.01■□□□□ 0.15
CHD1-204ENST00000505982 FAM163AQ96GL9 167 aaPredicted RBP15.98■□□□□ 0.15
CHD1-204ENST00000505982 PLCG2P16885 1265 aa15.97■□□□□ 0.15
CHD1-204ENST00000505982 PCDHB8Q9UN66 801 aa15.95■□□□□ 0.14
CHD1-204ENST00000505982 IRX5P78411 483 aaPredicted RBP15.9■□□□□ 0.14
CHD1-204ENST00000505982 ZNF467Q7Z7K2 595 aaPredicted RBP15.9■□□□□ 0.14
CHD1-204ENST00000505982 PCDH10Q9P2E7 1040 aa15.89■□□□□ 0.13
CHD1-204ENST00000505982 LCE2DQ5TA82 110 aaPredicted RBP15.87■□□□□ 0.13
CHD1-204ENST00000505982 OCEL1Q9H607 264 aa15.87■□□□□ 0.13
CHD1-204ENST00000505982 CHRM1P11229 460 aaPredicted RBP15.86■□□□□ 0.13
CHD1-204ENST00000505982 SLAIN1Q8ND83 568 aa15.83■□□□□ 0.12
CHD1-204ENST00000505982 SPOCK2Q92563 424 aa15.8■□□□□ 0.12
CHD1-204ENST00000505982 GOLGA2Q08379 1002 aa15.78■□□□□ 0.12
CHD1-204ENST00000505982 IFNLR1Q8IU57 520 aaPredicted RBP15.78■□□□□ 0.12
CHD1-204ENST00000505982 MKRN3Q13064 507 aaKnown RBP15.75■□□□□ 0.11
CHD1-204ENST00000505982 CIZ1Q9ULV3 898 aaPredicted RBP15.74■□□□□ 0.11
CHD1-204ENST00000505982 PSEN1P49768 467 aa15.73■□□□□ 0.11
CHD1-204ENST00000505982 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.7■□□□□ 0.1
CHD1-204ENST00000505982 PDAP1Q13442 181 aaKnown RBP15.67■□□□□ 0.1
CHD1-204ENST00000505982 PDCD7Q8N8D1 485 aaKnown RBP15.65■□□□□ 0.1
CHD1-204ENST00000505982 ST18O60284 1047 aa15.64■□□□□ 0.09
CHD1-204ENST00000505982 L3MBTL3Q96JM7 780 aaPredicted RBP15.64■□□□□ 0.09
CHD1-204ENST00000505982 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.63■□□□□ 0.092e-9■□□□□ 8.5
CHD1-204ENST00000505982 SNPHO15079 494 aa15.61■□□□□ 0.09
CHD1-204ENST00000505982 C3orf67Q6ZVT6 689 aa15.58■□□□□ 0.08
CHD1-204ENST00000505982 CDAN1Q8IWY9 1227 aa15.56■□□□□ 0.08
CHD1-204ENST00000505982 TRIM41Q8WV44 630 aa15.55■□□□□ 0.08
CHD1-204ENST00000505982 TMEM121BQ9BXQ6 578 aaPredicted RBP15.53■□□□□ 0.08
CHD1-204ENST00000505982 CABP2Q9NPB3 220 aa15.53■□□□□ 0.08
CHD1-204ENST00000505982 ILDR1Q86SU0 546 aaPredicted RBP15.5■□□□□ 0.07
CHD1-204ENST00000505982 G3V3G9 751 aa15.45■□□□□ 0.06
CHD1-204ENST00000505982 DPY19L2Q6NUT2 758 aa15.43■□□□□ 0.06
CHD1-204ENST00000505982 BOLA1Q9Y3E2 137 aa15.4■□□□□ 0.06
CHD1-204ENST00000505982 MARVELD3Q96A59 401 aa15.37■□□□□ 0.05
CHD1-204ENST00000505982 EFCAB3Q8N7B9 438 aa15.33■□□□□ 0.04
CHD1-204ENST00000505982 RIOK3O14730 519 aaKnown RBP15.3■□□□□ 0.04
CHD1-204ENST00000505982 EMP3P54852 163 aa15.28■□□□□ 0.04
CHD1-204ENST00000505982 VGFO15240 615 aaPredicted RBP15.25■□□□□ 0.03
CHD1-204ENST00000505982 SOX12O15370 315 aa15.23■□□□□ 0.03
CHD1-204ENST00000505982 RNF25Q96BH1 459 aaPredicted RBP15.23■□□□□ 0.03
CHD1-204ENST00000505982 AMER1Q5JTC6 1135 aaPredicted RBP15.22■□□□□ 0.03
CHD1-204ENST00000505982 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.21■□□□□ 0.03
CHD1-204ENST00000505982 ZFP91Q96JP5 570 aaPredicted RBP15.21■□□□□ 0.03
CHD1-204ENST00000505982 RTN4Q9NQC3 1192 aaKnown RBP15.18■□□□□ 0.02
CHD1-204ENST00000505982 FAM205CA6NFA0 338 aa15.17■□□□□ 0.02
CHD1-204ENST00000505982 ZNF710Q8N1W2 664 aa15.17■□□□□ 0.02
CHD1-204ENST00000505982 HOXB3P14651 431 aaPredicted RBP15.16■□□□□ 0.02
CHD1-204ENST00000505982 SPNS2Q8IVW8 549 aa15.16■□□□□ 0.02
CHD1-204ENST00000505982 HS3ST6Q96QI5 342 aa15.16■□□□□ 0.02
CHD1-204ENST00000505982 TAOK2Q9UL54 1235 aa15.16■□□□□ 0.02
CHD1-204ENST00000505982 DOK7Q18PE1 504 aa15.15■□□□□ 0.02
CHD1-204ENST00000505982 MICALL2Q8IY33 904 aa15.13■□□□□ 0.01
CHD1-204ENST00000505982 MMRN1Q13201 1228 aa15.12■□□□□ 0.01
CHD1-204ENST00000505982 PHF8Q9UPP1 1060 aa15.11■□□□□ 0.01
CHD1-204ENST00000505982 POTEB3A0JP26 581 aa15.09■□□□□ 0.01
CHD1-204ENST00000505982 RIMBP2O15034 1052 aa15.09■□□□□ 0.01
CHD1-204ENST00000505982 HOXB1P14653 301 aaPredicted RBP15.09■□□□□ 0.01
CHD1-204ENST00000505982 POTEBQ6S5H4 581 aa15.09■□□□□ 0.01
CHD1-204ENST00000505982 MS4A4AQ96JQ5 239 aa15.08■□□□□ 0
CHD1-204ENST00000505982 NLRP6P59044 892 aa15.04■□□□□ -0
CHD1-204ENST00000505982 BCL11BQ9C0K0 894 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms