RNA–Protein interactions for RNA: ENST00000505905.1

LIN54-205, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN54, Length 810 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-205ENST00000505905 PLCD3Q8N3E9 789 aa18.46■□□□□ 0.55
LIN54-205ENST00000505905 KIF12Q96FN5 646 aa18.39■□□□□ 0.53
LIN54-205ENST00000505905 PELP1Q8IZL8 1130 aaKnown RBP18.38■□□□□ 0.53
LIN54-205ENST00000505905 NUBP1P53384 320 aa18.34■□□□□ 0.53
LIN54-205ENST00000505905 ASTLQ6HA08 431 aaPredicted RBP18.34■□□□□ 0.53
LIN54-205ENST00000505905 ATMINO43313 823 aaPredicted RBP18.3■□□□□ 0.52
LIN54-205ENST00000505905 ZBTB47Q9UFB7 747 aaPredicted RBP18.29■□□□□ 0.52
LIN54-205ENST00000505905 MAP3K13O43283 966 aa18.27■□□□□ 0.52
LIN54-205ENST00000505905 POTEB2H3BUK9 544 aa18.26■□□□□ 0.51
LIN54-205ENST00000505905 FBXO3Q9UK99 471 aa18.23■□□□□ 0.51
LIN54-205ENST00000505905 TRPC6Q9Y210 931 aa18.23■□□□□ 0.51
LIN54-205ENST00000505905 ATN1P54259 1190 aaPredicted RBP18.16■□□□□ 0.5
LIN54-205ENST00000505905 BMP2KQ9NSY1 1161 aaPredicted RBP18.16■□□□□ 0.5
LIN54-205ENST00000505905 METRNQ9UJH8 293 aa18.15■□□□□ 0.5
LIN54-205ENST00000505905 SLC39A7Q92504 469 aa18.13■□□□□ 0.49
LIN54-205ENST00000505905 OTUD5Q96G74 571 aa18.12■□□□□ 0.49
LIN54-205ENST00000505905 C7P10643 843 aa18.11■□□□□ 0.49
LIN54-205ENST00000505905 VASPP50552 380 aaPredicted RBP18.1■□□□□ 0.49
LIN54-205ENST00000505905 FAM212AQ96EL1 285 aa18.1■□□□□ 0.49
LIN54-205ENST00000505905 TIE1P35590 1138 aa18.09■□□□□ 0.49
LIN54-205ENST00000505905 SGIP1Q9BQI5 828 aa18.08■□□□□ 0.48
LIN54-205ENST00000505905 PCDHB13Q9Y5F0 798 aa18.05■□□□□ 0.48
LIN54-205ENST00000505905 POTEJP0CG39 1038 aa18.04■□□□□ 0.48
LIN54-205ENST00000505905 TTLL13PA6NNM8 815 aa18.02■□□□□ 0.48
LIN54-205ENST00000505905 IFNL1Q8IU54 200 aa18.01■□□□□ 0.47
LIN54-205ENST00000505905 POTEFA5A3E0 1075 aa18■□□□□ 0.47
LIN54-205ENST00000505905 DCAF8Q5TAQ9 597 aa17.94■□□□□ 0.46
LIN54-205ENST00000505905 PYGBP11216 843 aa17.89■□□□□ 0.45
LIN54-205ENST00000505905 KLHL34Q8N239 644 aa17.88■□□□□ 0.45
LIN54-205ENST00000505905 TRIM35Q9UPQ4 493 aa17.87■□□□□ 0.45
LIN54-205ENST00000505905 COLQQ9Y215 455 aaPredicted RBP17.87■□□□□ 0.45
LIN54-205ENST00000505905 TMEM106CQ9BVX2 250 aa17.83■□□□□ 0.44
LIN54-205ENST00000505905 IER5LQ5T953 404 aa17.81■□□□□ 0.44
LIN54-205ENST00000505905 IFNLR1Q8IU57 520 aaPredicted RBP17.81■□□□□ 0.44
LIN54-205ENST00000505905 MAMSTRQ6ZN01 415 aa17.78■□□□□ 0.44
LIN54-205ENST00000505905 GSE1Q14687 1217 aa17.77■□□□□ 0.44
LIN54-205ENST00000505905 PCDHB8Q9UN66 801 aa17.77■□□□□ 0.44
LIN54-205ENST00000505905 SEC24BO95487 1268 aa17.72■□□□□ 0.43
LIN54-205ENST00000505905 CHRM1P11229 460 aaPredicted RBP17.71■□□□□ 0.43
LIN54-205ENST00000505905 SPOCK2Q92563 424 aa17.68■□□□□ 0.42
LIN54-205ENST00000505905 SCUBE2Q9NQ36 999 aa17.68■□□□□ 0.42
LIN54-205ENST00000505905 IRX5P78411 483 aaPredicted RBP17.65■□□□□ 0.42
LIN54-205ENST00000505905 ZNF467Q7Z7K2 595 aaPredicted RBP17.62■□□□□ 0.41
LIN54-205ENST00000505905 LCE2DQ5TA82 110 aaPredicted RBP17.57■□□□□ 0.4
LIN54-205ENST00000505905 PLCG2P16885 1265 aa17.56■□□□□ 0.4
LIN54-205ENST00000505905 OCEL1Q9H607 264 aa17.52■□□□□ 0.4
LIN54-205ENST00000505905 CIZ1Q9ULV3 898 aaPredicted RBP17.52■□□□□ 0.4
LIN54-205ENST00000505905 POTEMA6NI47 508 aa17.5■□□□□ 0.39
LIN54-205ENST00000505905 PSEN1P49768 467 aa17.49■□□□□ 0.39
LIN54-205ENST00000505905 POTEGQ6S5H5 508 aa17.48■□□□□ 0.39
LIN54-205ENST00000505905 PDCD7Q8N8D1 485 aaKnown RBP17.44■□□□□ 0.38
LIN54-205ENST00000505905 PDAP1Q13442 181 aaKnown RBP17.42■□□□□ 0.38
LIN54-205ENST00000505905 FAM163AQ96GL9 167 aaPredicted RBP17.41■□□□□ 0.38
LIN54-205ENST00000505905 SLAIN1Q8ND83 568 aa17.37■□□□□ 0.37
LIN54-205ENST00000505905 MKRN3Q13064 507 aaKnown RBP17.35■□□□□ 0.37
LIN54-205ENST00000505905 ILDR1Q86SU0 546 aaPredicted RBP17.35■□□□□ 0.37
LIN54-205ENST00000505905 GOLGA2Q08379 1002 aa17.32■□□□□ 0.36
LIN54-205ENST00000505905 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
LIN54-205ENST00000505905 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.29■□□□□ 0.36
LIN54-205ENST00000505905 CABP2Q9NPB3 220 aa17.26■□□□□ 0.35
LIN54-205ENST00000505905 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.23■□□□□ 0.35
LIN54-205ENST00000505905 RNF25Q96BH1 459 aaPredicted RBP17.22■□□□□ 0.35
LIN54-205ENST00000505905 PLSCR2Q9NRY7 297 aa17.22■□□□□ 0.35
LIN54-205ENST00000505905 DPY19L2Q6NUT2 758 aa17.2■□□□□ 0.34
LIN54-205ENST00000505905 ST18O60284 1047 aa17.19■□□□□ 0.34
LIN54-205ENST00000505905 L3MBTL3Q96JM7 780 aaPredicted RBP17.19■□□□□ 0.34
LIN54-205ENST00000505905 PCDH10Q9P2E7 1040 aa17.19■□□□□ 0.34
LIN54-205ENST00000505905 RIOK3O14730 519 aaKnown RBP17.12■□□□□ 0.33
LIN54-205ENST00000505905 C3orf67Q6ZVT6 689 aa17.12■□□□□ 0.33
LIN54-205ENST00000505905 EFCAB3Q8N7B9 438 aa17.1■□□□□ 0.33
LIN54-205ENST00000505905 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.04■□□□□ 0.32
LIN54-205ENST00000505905 SNPHO15079 494 aa17.04■□□□□ 0.32
LIN54-205ENST00000505905 ZFP91Q96JP5 570 aaPredicted RBP17.04■□□□□ 0.32
LIN54-205ENST00000505905 BOLA1Q9Y3E2 137 aa17.04■□□□□ 0.32
LIN54-205ENST00000505905 VGFO15240 615 aaPredicted RBP17.02■□□□□ 0.32
LIN54-205ENST00000505905 TMEM121BQ9BXQ6 578 aaPredicted RBP17■□□□□ 0.31
LIN54-205ENST00000505905 CDAN1Q8IWY9 1227 aa16.97■□□□□ 0.31
LIN54-205ENST00000505905 MS4A4AQ96JQ5 239 aa16.94■□□□□ 0.3
LIN54-205ENST00000505905 SOX12O15370 315 aa16.92■□□□□ 0.3
LIN54-205ENST00000505905 MARVELD3Q96A59 401 aa16.9■□□□□ 0.3
LIN54-205ENST00000505905 G3V3G9 751 aa16.89■□□□□ 0.29
LIN54-205ENST00000505905 PKD2Q13563 968 aa16.88■□□□□ 0.29
LIN54-205ENST00000505905 PHF8Q9UPP1 1060 aa16.88■□□□□ 0.29
LIN54-205ENST00000505905 HOXB3P14651 431 aaPredicted RBP16.86■□□□□ 0.29
LIN54-205ENST00000505905 MICALL2Q8IY33 904 aa16.85■□□□□ 0.29
LIN54-205ENST00000505905 BCL11BQ9C0K0 894 aaPredicted RBP16.84■□□□□ 0.29
LIN54-205ENST00000505905 ECM2O94769 699 aaPredicted RBP16.82■□□□□ 0.28
LIN54-205ENST00000505905 TMEM92Q6UXU6 159 aa16.82■□□□□ 0.28
LIN54-205ENST00000505905 FBXO22Q8NEZ5 403 aa16.8■□□□□ 0.28
LIN54-205ENST00000505905 RGL2O15211 777 aa16.78■□□□□ 0.28
LIN54-205ENST00000505905 TAOK2Q9UL54 1235 aa16.77■□□□□ 0.28
LIN54-205ENST00000505905 EMP3P54852 163 aa16.76■□□□□ 0.27
LIN54-205ENST00000505905 POTEB3A0JP26 581 aa16.75■□□□□ 0.27
LIN54-205ENST00000505905 POTEBQ6S5H4 581 aa16.75■□□□□ 0.27
LIN54-205ENST00000505905 STK24Q9Y6E0 443 aa16.75■□□□□ 0.27
LIN54-205ENST00000505905 NLRP6P59044 892 aa16.72■□□□□ 0.27
LIN54-205ENST00000505905 MFRPQ9BY79 579 aa16.72■□□□□ 0.27
LIN54-205ENST00000505905 STK25O00506 426 aa16.71■□□□□ 0.27
LIN54-205ENST00000505905 HS3ST6Q96QI5 342 aa16.66■□□□□ 0.26
LIN54-205ENST00000505905 HOXB1P14653 301 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms