RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TRIM41Q8WV44 630 aa10.66□□□□□ -0.7
TOPBP1-204ENST00000505804 PYGBP11216 843 aa10.6□□□□□ -0.71
TOPBP1-204ENST00000505804 CHRM1P11229 460 aaPredicted RBP10.58□□□□□ -0.72
TOPBP1-204ENST00000505804 RNF25Q96BH1 459 aaPredicted RBP10.57□□□□□ -0.72
TOPBP1-204ENST00000505804 PAK3O75914 559 aaPredicted RBP10.55□□□□□ -0.72
TOPBP1-204ENST00000505804 CCDC61Q9Y6R9 512 aa10.55□□□□□ -0.72
TOPBP1-204ENST00000505804 CD44P16070 742 aaKnown RBP10.53□□□□□ -0.72
TOPBP1-204ENST00000505804 RIOK3O14730 519 aaKnown RBP10.52□□□□□ -0.73
TOPBP1-204ENST00000505804 ZRANB1Q9UGI0 708 aa10.52□□□□□ -0.73
TOPBP1-204ENST00000505804 CHGAP10645 457 aaKnown RBP10.49□□□□□ -0.73
TOPBP1-204ENST00000505804 C19orf67A6NJJ6 358 aa10.47□□□□□ -0.73
TOPBP1-204ENST00000505804 VGFO15240 615 aaPredicted RBP10.44□□□□□ -0.74
TOPBP1-204ENST00000505804 MAP3K13O43283 966 aa10.44□□□□□ -0.74
TOPBP1-204ENST00000505804 KIF12Q96FN5 646 aa10.44□□□□□ -0.74
TOPBP1-204ENST00000505804 TAOK2Q9UL54 1235 aa10.44□□□□□ -0.74
TOPBP1-204ENST00000505804 PCDHB8Q9UN66 801 aa10.44□□□□□ -0.74
TOPBP1-204ENST00000505804 PCDHB13Q9Y5F0 798 aa10.44□□□□□ -0.74
TOPBP1-204ENST00000505804 HAX1O00165 279 aa10.43□□□□□ -0.74
TOPBP1-204ENST00000505804 BBXQ8WY36 941 aaPredicted RBP10.43□□□□□ -0.74
TOPBP1-204ENST00000505804 PHF12Q96QT6 1004 aa10.43□□□□□ -0.74
TOPBP1-204ENST00000505804 ZNF467Q7Z7K2 595 aaPredicted RBP10.42□□□□□ -0.74
TOPBP1-204ENST00000505804 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.4□□□□□ -0.74
TOPBP1-204ENST00000505804 HS6ST3Q8IZP7 471 aa10.4□□□□□ -0.74
TOPBP1-204ENST00000505804 ZFP91Q96JP5 570 aaPredicted RBP10.4□□□□□ -0.74
TOPBP1-204ENST00000505804 STK25O00506 426 aa10.39□□□□□ -0.75
TOPBP1-204ENST00000505804 IFNL1Q8IU54 200 aa10.39□□□□□ -0.75
TOPBP1-204ENST00000505804 ZNF579Q8NAF0 562 aaKnown RBP10.39□□□□□ -0.75
TOPBP1-204ENST00000505804 SLC24A1O60721 1099 aa10.38□□□□□ -0.75
TOPBP1-204ENST00000505804 PLCB2Q00722 1185 aa10.38□□□□□ -0.75
TOPBP1-204ENST00000505804 EVX2Q03828 476 aa10.38□□□□□ -0.75
TOPBP1-204ENST00000505804 SGIP1Q9BQI5 828 aa10.38□□□□□ -0.75
TOPBP1-204ENST00000505804 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.38□□□□□ -0.75
TOPBP1-204ENST00000505804 BCL11BQ9C0K0 894 aaPredicted RBP10.36□□□□□ -0.75
TOPBP1-204ENST00000505804 PDAP1Q13442 181 aaKnown RBP10.35□□□□□ -0.75
TOPBP1-204ENST00000505804 POTEHQ6S545 545 aa10.35□□□□□ -0.75
TOPBP1-204ENST00000505804 STK24Q9Y6E0 443 aa10.35□□□□□ -0.75
TOPBP1-204ENST00000505804 PSEN1P49768 467 aa10.34□□□□□ -0.75
TOPBP1-204ENST00000505804 PAXIP1Q6ZW49 1069 aaPredicted RBP10.33□□□□□ -0.76
TOPBP1-204ENST00000505804 CFAP44Q96MT7 982 aa10.32□□□□□ -0.76
TOPBP1-204ENST00000505804 MS4A3Q96HJ5 214 aa10.3□□□□□ -0.76
TOPBP1-204ENST00000505804 DNAJC5Q9H3Z4 198 aa10.3□□□□□ -0.76
TOPBP1-204ENST00000505804 NKX1-1Q15270 411 aaPredicted RBP10.29□□□□□ -0.76
TOPBP1-204ENST00000505804 SPRYD3Q8NCJ5 442 aa10.29□□□□□ -0.76
TOPBP1-204ENST00000505804 TRPC6Q9Y210 931 aa10.27□□□□□ -0.77
TOPBP1-204ENST00000505804 HAP1P54257 671 aaPredicted RBP10.25□□□□□ -0.77
TOPBP1-204ENST00000505804 GALR2O43603 387 aaPredicted RBP10.24□□□□□ -0.77
TOPBP1-204ENST00000505804 GTPBP6O43824 516 aaPredicted RBP10.21□□□□□ -0.77
TOPBP1-204ENST00000505804 TMEM106CQ9BVX2 250 aa10.21□□□□□ -0.77
TOPBP1-204ENST00000505804 CABP2Q9NPB3 220 aa10.21□□□□□ -0.77
TOPBP1-204ENST00000505804 CLCN6P51797 869 aa10.19□□□□□ -0.78
TOPBP1-204ENST00000505804 EFCAB3Q8N7B9 438 aa10.18□□□□□ -0.78
TOPBP1-204ENST00000505804 GABBR2O75899 941 aa10.16□□□□□ -0.78
TOPBP1-204ENST00000505804 TIE1P35590 1138 aa10.16□□□□□ -0.78
TOPBP1-204ENST00000505804 TTLL13PA6NNM8 815 aa10.15□□□□□ -0.78
TOPBP1-204ENST00000505804 TSHZ2Q9NRE2 1034 aa10.15□□□□□ -0.78
TOPBP1-204ENST00000505804 BMP2KQ9NSY1 1161 aaPredicted RBP10.15□□□□□ -0.78
TOPBP1-204ENST00000505804 MFRPQ9BY79 579 aa10.14□□□□□ -0.79
TOPBP1-204ENST00000505804 GOLGA2Q08379 1002 aa10.13□□□□□ -0.79
TOPBP1-204ENST00000505804 RYDENQ9NUL5 291 aaKnown RBP10.12□□□□□ -0.79
TOPBP1-204ENST00000505804 SOX12O15370 315 aa10.11□□□□□ -0.79
TOPBP1-204ENST00000505804 PHF8Q9UPP1 1060 aa10.11□□□□□ -0.79
TOPBP1-204ENST00000505804 MKRN3Q13064 507 aaKnown RBP10.09□□□□□ -0.79
TOPBP1-204ENST00000505804 TRIM35Q9UPQ4 493 aa10.09□□□□□ -0.79
TOPBP1-204ENST00000505804 ATMINO43313 823 aaPredicted RBP10.08□□□□□ -0.8
TOPBP1-204ENST00000505804 ATN1P54259 1190 aaPredicted RBP10.08□□□□□ -0.8
TOPBP1-204ENST00000505804 NLRP6P59044 892 aa10.08□□□□□ -0.8
TOPBP1-204ENST00000505804 FBXO22Q8NEZ5 403 aa10.08□□□□□ -0.8
TOPBP1-204ENST00000505804 VSIG10Q8N0Z9 540 aa10.07□□□□□ -0.8
TOPBP1-204ENST00000505804 ASTLQ6HA08 431 aaPredicted RBP10.05□□□□□ -0.8
TOPBP1-204ENST00000505804 KDM2AQ9Y2K7 1162 aa10.05□□□□□ -0.8
TOPBP1-204ENST00000505804 PPP1R37O75864 691 aa10.04□□□□□ -0.8
TOPBP1-204ENST00000505804 SP7Q8TDD2 431 aaPredicted RBP10.04□□□□□ -0.8
TOPBP1-204ENST00000505804 MS4A4AQ96JQ5 239 aa10.03□□□□□ -0.8
TOPBP1-204ENST00000505804 DCBLD2Q96PD2 775 aa10.03□□□□□ -0.8
TOPBP1-204ENST00000505804 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.01□□□□□ -0.811e-6■■■■□ 25.6
TOPBP1-204ENST00000505804 PELP1Q8IZL8 1130 aaKnown RBP9.99□□□□□ -0.81
TOPBP1-204ENST00000505804 ILDR1Q86SU0 546 aaPredicted RBP9.97□□□□□ -0.81
TOPBP1-204ENST00000505804 POTEIP0CG38 1075 aa9.96□□□□□ -0.82
TOPBP1-204ENST00000505804 DPY19L2Q6NUT2 758 aa9.95□□□□□ -0.82
TOPBP1-204ENST00000505804 CADPS2Q86UW7 1296 aa9.95□□□□□ -0.82
TOPBP1-204ENST00000505804 IRX5P78411 483 aaPredicted RBP9.94□□□□□ -0.82
TOPBP1-204ENST00000505804 IER5LQ5T953 404 aa9.94□□□□□ -0.82
TOPBP1-204ENST00000505804 OCEL1Q9H607 264 aa9.93□□□□□ -0.82
TOPBP1-204ENST00000505804 PDCD7Q8N8D1 485 aaKnown RBP9.91□□□□□ -0.82
TOPBP1-204ENST00000505804 COLQQ9Y215 455 aaPredicted RBP9.89□□□□□ -0.83
TOPBP1-204ENST00000505804 SEC24BO95487 1268 aa9.88□□□□□ -0.83
TOPBP1-204ENST00000505804 PLCG2P16885 1265 aa9.88□□□□□ -0.83
TOPBP1-204ENST00000505804 SLC39A7Q92504 469 aa9.88□□□□□ -0.83
TOPBP1-204ENST00000505804 C7P10643 843 aa9.87□□□□□ -0.83
TOPBP1-204ENST00000505804 METRNQ9UJH8 293 aa9.86□□□□□ -0.83
TOPBP1-204ENST00000505804 POTEFA5A3E0 1075 aa9.85□□□□□ -0.83
TOPBP1-204ENST00000505804 MICALL2Q8IY33 904 aa9.83□□□□□ -0.84
TOPBP1-204ENST00000505804 WDR70Q9NW82 654 aa9.83□□□□□ -0.84
TOPBP1-204ENST00000505804 BOLA1Q9Y3E2 137 aa9.82□□□□□ -0.84
TOPBP1-204ENST00000505804 NCKAP5LQ9HCH0 1330 aa9.81□□□□□ -0.84
TOPBP1-204ENST00000505804 G3V3G9 751 aa9.8□□□□□ -0.84
TOPBP1-204ENST00000505804 PDE4AP27815 886 aa9.8□□□□□ -0.84
TOPBP1-204ENST00000505804 L3MBTL3Q96JM7 780 aaPredicted RBP9.8□□□□□ -0.84
TOPBP1-204ENST00000505804 LARP6Q9BRS8 491 aaKnown RBP9.8□□□□□ -0.84
TOPBP1-204ENST00000505804 TMEM121BQ9BXQ6 578 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms