RNA–Protein interactions for RNA: ENST00000505614.1

NDFIP1-203, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 3

Gene NDFIP1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-203ENST00000505614 FARP1Q9Y4F1 1045 aaPredicted RBP12.81□□□□□ -0.36
NDFIP1-203ENST00000505614 DCAF8Q5TAQ9 597 aa12.8□□□□□ -0.36
NDFIP1-203ENST00000505614 DCAF8L2P0C7V8 631 aa12.72□□□□□ -0.37
NDFIP1-203ENST00000505614 RASEFQ8IZ41 740 aa12.72□□□□□ -0.37
NDFIP1-203ENST00000505614 CD44P16070 742 aaKnown RBP12.69□□□□□ -0.38
NDFIP1-203ENST00000505614 CHRM1P11229 460 aaPredicted RBP12.67□□□□□ -0.38
NDFIP1-203ENST00000505614 PAK3O75914 559 aaPredicted RBP12.66□□□□□ -0.38
NDFIP1-203ENST00000505614 TAOK2Q9UL54 1235 aa12.65□□□□□ -0.38
NDFIP1-203ENST00000505614 RGL2O15211 777 aa12.63□□□□□ -0.39
NDFIP1-203ENST00000505614 GABBR2O75899 941 aa12.61□□□□□ -0.39
NDFIP1-203ENST00000505614 TSPYL2Q9H2G4 693 aaPredicted RBP12.61□□□□□ -0.39
NDFIP1-203ENST00000505614 RIOK3O14730 519 aaKnown RBP12.55□□□□□ -0.4
NDFIP1-203ENST00000505614 PYGBP11216 843 aa12.54□□□□□ -0.4
NDFIP1-203ENST00000505614 ZRANB1Q9UGI0 708 aa12.53□□□□□ -0.4
NDFIP1-203ENST00000505614 CCDC61Q9Y6R9 512 aa12.52□□□□□ -0.41
NDFIP1-203ENST00000505614 RNF25Q96BH1 459 aaPredicted RBP12.5□□□□□ -0.41
NDFIP1-203ENST00000505614 VGFO15240 615 aaPredicted RBP12.49□□□□□ -0.41
NDFIP1-203ENST00000505614 ZNF467Q7Z7K2 595 aaPredicted RBP12.49□□□□□ -0.41
NDFIP1-203ENST00000505614 ZNF579Q8NAF0 562 aaKnown RBP12.48□□□□□ -0.41
NDFIP1-203ENST00000505614 BBXQ8WY36 941 aaPredicted RBP12.47□□□□□ -0.41
NDFIP1-203ENST00000505614 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.47□□□□□ -0.41
NDFIP1-203ENST00000505614 CHGAP10645 457 aaKnown RBP12.46□□□□□ -0.41
NDFIP1-203ENST00000505614 CLCN6P51797 869 aa12.46□□□□□ -0.41
NDFIP1-203ENST00000505614 SGIP1Q9BQI5 828 aa12.46□□□□□ -0.41
NDFIP1-203ENST00000505614 SLC24A1O60721 1099 aa12.45□□□□□ -0.42
NDFIP1-203ENST00000505614 HS6ST3Q8IZP7 471 aa12.44□□□□□ -0.42
NDFIP1-203ENST00000505614 KIF12Q96FN5 646 aa12.39□□□□□ -0.43
NDFIP1-203ENST00000505614 PLCB2Q00722 1185 aa12.38□□□□□ -0.43
NDFIP1-203ENST00000505614 PCDHB13Q9Y5F0 798 aa12.38□□□□□ -0.43
NDFIP1-203ENST00000505614 STK25O00506 426 aa12.37□□□□□ -0.43
NDFIP1-203ENST00000505614 DNAJC5Q9H3Z4 198 aa12.37□□□□□ -0.43
NDFIP1-203ENST00000505614 PDAP1Q13442 181 aaKnown RBP12.36□□□□□ -0.43
NDFIP1-203ENST00000505614 PHF12Q96QT6 1004 aa12.36□□□□□ -0.43
NDFIP1-203ENST00000505614 MAP3K13O43283 966 aa12.35□□□□□ -0.43
NDFIP1-203ENST00000505614 DCBLD2Q96PD2 775 aa12.35□□□□□ -0.43
NDFIP1-203ENST00000505614 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.34□□□□□ -0.43
NDFIP1-203ENST00000505614 ZFP91Q96JP5 570 aaPredicted RBP12.34□□□□□ -0.43
NDFIP1-203ENST00000505614 PCDHB8Q9UN66 801 aa12.33□□□□□ -0.44
NDFIP1-203ENST00000505614 GALR2O43603 387 aaPredicted RBP12.32□□□□□ -0.44
NDFIP1-203ENST00000505614 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
NDFIP1-203ENST00000505614 IFNL1Q8IU54 200 aa12.3□□□□□ -0.44
NDFIP1-203ENST00000505614 SPRYD3Q8NCJ5 442 aa12.3□□□□□ -0.44
NDFIP1-203ENST00000505614 BCL11BQ9C0K0 894 aaPredicted RBP12.3□□□□□ -0.44
NDFIP1-203ENST00000505614 STK24Q9Y6E0 443 aa12.3□□□□□ -0.44
NDFIP1-203ENST00000505614 PSEN1P49768 467 aa12.29□□□□□ -0.44
NDFIP1-203ENST00000505614 PAXIP1Q6ZW49 1069 aaPredicted RBP12.27□□□□□ -0.45
NDFIP1-203ENST00000505614 RYDENQ9NUL5 291 aaKnown RBP12.26□□□□□ -0.45
NDFIP1-203ENST00000505614 CFAP44Q96MT7 982 aa12.24□□□□□ -0.45
NDFIP1-203ENST00000505614 LHX8Q68G74 356 aa12.22□□□□□ -0.45
NDFIP1-203ENST00000505614 MS4A3Q96HJ5 214 aa12.2□□□□□ -0.46
NDFIP1-203ENST00000505614 HAP1P54257 671 aaPredicted RBP12.19□□□□□ -0.46
NDFIP1-203ENST00000505614 NKX1-1Q15270 411 aaPredicted RBP12.16□□□□□ -0.46
NDFIP1-203ENST00000505614 TIE1P35590 1138 aa12.14□□□□□ -0.47
NDFIP1-203ENST00000505614 GTPBP6O43824 516 aaPredicted RBP12.13□□□□□ -0.47
NDFIP1-203ENST00000505614 TMEM106CQ9BVX2 250 aa12.13□□□□□ -0.47
NDFIP1-203ENST00000505614 GOLGA2Q08379 1002 aa12.12□□□□□ -0.47
NDFIP1-203ENST00000505614 SOX12O15370 315 aa12.11□□□□□ -0.47
NDFIP1-203ENST00000505614 CABP2Q9NPB3 220 aa12.11□□□□□ -0.47
NDFIP1-203ENST00000505614 VSIG10Q8N0Z9 540 aa12.08□□□□□ -0.48
NDFIP1-203ENST00000505614 NLRP6P59044 892 aa12.06□□□□□ -0.48
NDFIP1-203ENST00000505614 ASTLQ6HA08 431 aaPredicted RBP12.06□□□□□ -0.48
NDFIP1-203ENST00000505614 EFCAB3Q8N7B9 438 aa12.06□□□□□ -0.48
NDFIP1-203ENST00000505614 TRPC6Q9Y210 931 aa12.05□□□□□ -0.48
NDFIP1-203ENST00000505614 TTLL13PA6NNM8 815 aa12.04□□□□□ -0.48
NDFIP1-203ENST00000505614 ATMINO43313 823 aaPredicted RBP12.04□□□□□ -0.48
NDFIP1-203ENST00000505614 MKRN3Q13064 507 aaKnown RBP12.04□□□□□ -0.48
NDFIP1-203ENST00000505614 PELP1Q8IZL8 1130 aaKnown RBP12.04□□□□□ -0.48
NDFIP1-203ENST00000505614 MFRPQ9BY79 579 aa12.02□□□□□ -0.49
NDFIP1-203ENST00000505614 BMP2KQ9NSY1 1161 aaPredicted RBP12.02□□□□□ -0.49
NDFIP1-203ENST00000505614 TSHZ2Q9NRE2 1034 aa12□□□□□ -0.49
NDFIP1-203ENST00000505614 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
NDFIP1-203ENST00000505614 SLC39A7Q92504 469 aa11.98□□□□□ -0.49
NDFIP1-203ENST00000505614 ATN1P54259 1190 aaPredicted RBP11.97□□□□□ -0.49
NDFIP1-203ENST00000505614 PHF8Q9UPP1 1060 aa11.97□□□□□ -0.49
NDFIP1-203ENST00000505614 FBXO22Q8NEZ5 403 aa11.96□□□□□ -0.49
NDFIP1-203ENST00000505614 TRIM35Q9UPQ4 493 aa11.96□□□□□ -0.49
NDFIP1-203ENST00000505614 C7P10643 843 aa11.95□□□□□ -0.5
NDFIP1-203ENST00000505614 POTEB2H3BUK9 544 aa11.92□□□□□ -0.5
NDFIP1-203ENST00000505614 IER5LQ5T953 404 aa11.92□□□□□ -0.5
NDFIP1-203ENST00000505614 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.91□□□□□ -0.5
NDFIP1-203ENST00000505614 ILDR1Q86SU0 546 aaPredicted RBP11.88□□□□□ -0.51
NDFIP1-203ENST00000505614 KDM2AQ9Y2K7 1162 aa11.87□□□□□ -0.51
NDFIP1-203ENST00000505614 OTUD5Q96G74 571 aa11.85□□□□□ -0.51
NDFIP1-203ENST00000505614 MS4A4AQ96JQ5 239 aa11.85□□□□□ -0.51
NDFIP1-203ENST00000505614 OCEL1Q9H607 264 aa11.84□□□□□ -0.51
NDFIP1-203ENST00000505614 PPP1R37O75864 691 aa11.83□□□□□ -0.52
NDFIP1-203ENST00000505614 SEC24BO95487 1268 aa11.8□□□□□ -0.52
NDFIP1-203ENST00000505614 PLCG2P16885 1265 aa11.8□□□□□ -0.52
NDFIP1-203ENST00000505614 IRX5P78411 483 aaPredicted RBP11.8□□□□□ -0.52
NDFIP1-203ENST00000505614 WDR70Q9NW82 654 aa11.78□□□□□ -0.52
NDFIP1-203ENST00000505614 MAMSTRQ6ZN01 415 aa11.77□□□□□ -0.53
NDFIP1-203ENST00000505614 POTEFA5A3E0 1075 aa11.76□□□□□ -0.53
NDFIP1-203ENST00000505614 G3V3G9 751 aa11.76□□□□□ -0.53
NDFIP1-203ENST00000505614 POTEJP0CG39 1038 aa11.76□□□□□ -0.53
NDFIP1-203ENST00000505614 PDCD7Q8N8D1 485 aaKnown RBP11.76□□□□□ -0.53
NDFIP1-203ENST00000505614 L3MBTL3Q96JM7 780 aaPredicted RBP11.74□□□□□ -0.53
NDFIP1-203ENST00000505614 SCUBE2Q9NQ36 999 aa11.74□□□□□ -0.53
NDFIP1-203ENST00000505614 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
NDFIP1-203ENST00000505614 CADPS2Q86UW7 1296 aa11.73□□□□□ -0.53
NDFIP1-203ENST00000505614 PDE4AP27815 886 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms